Usefulness of High-Quality Core Genome Single-Nucleotide Variant Analysis for Subtyping the Highly Clonal and the Most Prevalent Salmonella enterica Serovar Heidelberg Clone in the Context of Outbreak Investigations (English)
- New search for: Bekal, S.
- New search for: Berry, C.
- New search for: Reimer, A. R.
- New search for: Van Domselaar, G.
- New search for: Beaudry, G.
- New search for: Fournier, E.
- New search for: Doualla-Bell, F.
- New search for: Levac, E.
- New search for: Gaulin, C.
- New search for: Ramsay, D.
- New search for: Bekal, S.
- New search for: Berry, C.
- New search for: Reimer, A. R.
- New search for: Van Domselaar, G.
- New search for: Beaudry, G.
- New search for: Fournier, E.
- New search for: Doualla-Bell, F.
- New search for: Levac, E.
- New search for: Gaulin, C.
- New search for: Ramsay, D.
In:
Journal of clinical microbiology
;
54
, 2
;
289-295
;
2016
-
ISSN:
- Article (Journal) / Print
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Title:Usefulness of High-Quality Core Genome Single-Nucleotide Variant Analysis for Subtyping the Highly Clonal and the Most Prevalent Salmonella enterica Serovar Heidelberg Clone in the Context of Outbreak Investigations
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Contributors:Bekal, S. ( author ) / Berry, C. ( author ) / Reimer, A. R. ( author ) / Van Domselaar, G. ( author ) / Beaudry, G. ( author ) / Fournier, E. ( author ) / Doualla-Bell, F. ( author ) / Levac, E. ( author ) / Gaulin, C. ( author ) / Ramsay, D. ( author )
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Published in:Journal of clinical microbiology ; 54, 2 ; 289-295
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Publisher:
- New search for: AMERICAN SOCIETY FOR MICROBIOLOGY
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Publication date:2016-01-01
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Size:7 pages
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ISSN:
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Type of media:Article (Journal)
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Type of material:Print
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Language:English
- New search for: 616.01
- Further information on Dewey Decimal Classification
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Classification:
DDC: 616.01 -
Source:
© Metadata Copyright the British Library Board and other contributors. All rights reserved.
Table of contents – Volume 54, Issue 2
The tables of contents are generated automatically and are based on the data records of the individual contributions available in the index of the TIB portal. The display of the Tables of Contents may therefore be incomplete.
- 249
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A 54-Year-Old Male with Acute Myelogenous Leukemia Presenting with Right Periorbital Swelling and DiplopiaRamanan, Poornima / Wengenack, Nancy L. / Pritt, Bobbi S. et al. | 2016
- 250
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Clyde Thornsberry, Ph.DMunson, Erik et al. | 2016
- 254
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Point-Counterpoint: Reflex Cultures Reduce Laboratory Workload and Improve Antimicrobial Stewardship in Patients Suspected of Having Urinary Tract InfectionsHumphries, Romney M. / Bard, Jennifer Dien et al. | 2016
- 259
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Ultrasensitive Detection and Quantification of Toxins for Optimized Diagnosis of Clostridium difficile InfectionPollock, Nira R. et al. | 2016
- 265
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Role of Serologic and Molecular Diagnostic Assays in Identification and Management of Hepatitis C Virus InfectionCloherty, Gavin / Talal, Andrew / Coller, Kelly / Steinhart, Corklin / Hackett, John / Dawson, George / Rockstroh, Juergen / Feld, Jordan et al. | 2016
- 274
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Blood Transcriptional Biomarkers for Active Tuberculosis among Patients in the United States: a Case-Control Study with Systematic Cross-Classifier EvaluationWalter, Nicholas D. / Miller, Mikaela A. / Vasquez, Joshua / Weiner, Marc / Chapman, Adam / Engle, Melissa / Higgins, Michael / Quinones, Amy M. / Rosselli, Vanessa / Canono, Elizabeth et al. | 2016
- 283
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Changes in the Population of Methicillin-Resistant Staphylococcus pseudintermedius and Dissemination of Antimicrobial-Resistant Phenotypes in the NetherlandsDuim, Birgitta / Verstappen, Koen M. / Broens, Els M. / Laarhoven, Laura M. / van Duijkeren, Engeline / Hordijk, Joost / de Heus, Phebe / Spaninks, Mirlin / Timmerman, Arjen J. / Wagenaar, Jaap A. et al. | 2016
- 289
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Usefulness of High-Quality Core Genome Single-Nucleotide Variant Analysis for Subtyping the Highly Clonal and the Most Prevalent Salmonella enterica Serovar Heidelberg Clone in the Context of Outbreak InvestigationsBekal, S. / Berry, C. / Reimer, A. R. / Van Domselaar, G. / Beaudry, G. / Fournier, E. / Doualla-Bell, F. / Levac, E. / Gaulin, C. / Ramsay, D. et al. | 2016
- 296
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Characterization of Samples Identified as Hepatitis C Virus Genotype 1 without Subtype by Abbott RealTime HCV Genotype II Assay Using the New Abbott HCV Genotype Plus RUO TestMokhtari, Camelia / Ebel, Anne / Reinhardt, Birgit / Merlin, Sandra / Proust, Stéphanie / Roque-Afonso, Anne-Marie et al. | 2016
- 300
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Evaluation of an Image Analysis Device (APAS) for Screening Urine CulturesGlasson, John / Hill, Rhys / Summerford, Michael / Giglio, Steven et al. | 2016
- 305
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Multicenter Evaluation of MRSASelect II Chromogenic Agar for Identification of Methicillin-Resistant Staphylococcus aureus from Wound and Nasal SpecimensHernandez, Diana R. / Newton, Duane W. / Ledeboer, Nathan A. / Buchan, Blake / Young, Carol / Clark, Andrew E. / Connoly, Jessica / Wolk, Donna M. et al. | 2016
- 312
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Comparison of Two Culture Methods for Use in Assessing Microbial Contamination of DuodenoscopesGazdik, Michaela A. / Coombs, Jana / Burke, John P. / Lopansri, Bert K. et al. | 2016
- 317
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Epidemiologic and Genotypic Review of Carbapenemase-Producing Organisms in British Columbia, Canada, between 2008 and 2014Sekirov, Inna / Croxen, Matthew A. / Ng, Corrinne / Azana, Robert / Chang, Yin / Mataseje, Laura / Boyd, David / Mangat, Chand / Mack, Benjamin / Tadros, Manal et al. | 2016
- 328
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Comparative Evaluation of Inoculation of Urine Samples with the Copan WASP and BD Kiestra InoqulA InstrumentsIversen, Jesper / Stendal, Gitta / Gerdes, Cecilie M. / Meyer, Christian H. / Andersen, Christian Østergaard / Frimodt-Møller, Niels et al. | 2016
- 333
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Prospective Whole-Genome Sequencing Enhances National Surveillance of Listeria monocytogenesKwong, Jason C. / Mercoulia, Karolina / Tomita, Takehiro / Easton, Marion / Li, Hua Y. / Bulach, Dieter M. / Stinear, Timothy P. / Seemann, Torsten / Howden, Benjamin P. et al. | 2016
- 343
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Agreement of Direct Antifungal Susceptibility Testing from Positive Blood Culture Bottles with the Conventional Method for Candida SpeciesJabeen, Kauser / Kumar, Haresh / Farooqi, Joveria / Mehboob, Raunaq / Brandt, Mary E. / Zafar, Afia et al. | 2016
- 349
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Evaluation of the BYG Carba Test, a New Electrochemical Assay for Rapid Laboratory Detection of Carbapenemase-Producing EnterobacteriaceaeBogaerts, Pierre / Yunus, Sami / Massart, Marion / Huang, Te-Din / Glupczynski, Youri et al. | 2016
- 359
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Comparative Evaluation of the Diagnostic Performance of the Prototype Cepheid GeneXpert Ebola Assayvan Vuren, Petrus Jansen / Grobbelaar, Antoinette / Storm, Nadia / Conteh, Ousman / Konneh, Kelfala / Kamara, Abdul / Sanne, Ian / Paweska, Janusz T. et al. | 2016
- 368
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Metagenomic Approach for Identification of the Pathogens Associated with Diarrhea in Stool SpecimensZhou, Yanjiao / Wylie, Kristine M. / El Feghaly, Rana E. / Mihindukulasuriya, Kathie A. / Elward, Alexis / Haslam, David B. / Storch, Gregory A. / Weinstock, George M. et al. | 2016
- 376
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Evaluation of Matrix-Assisted Laser Desorption Ionization—Time of Flight Mass Spectrometry for Identification of Mycobacterium species, Nocardia species, and Other Aerobic ActinomycetesBuckwalter, S. P. / Olson, S. L. / Connelly, B. J. / Lucas, B. C. / Rodning, A. A. / Walchak, R. C. / Deml, S. M. / Wohlfiel, S. L. / Wengenack, N. L. et al. | 2016
- 385
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How Many Samples and How Many Culture Media To Diagnose a Prosthetic Joint Infection: a Clinical and Microbiological Prospective Multicenter StudyBémer, Pascale / Léger, Julie / Tandé, Didier / Plouzeau, Chloé / Valentin, Anne Sophie / Jolivet-Gougeon, Anne / Lemarié, Carole / Kempf, Marie / Héry-Arnaud, Geneviève / Bret, Laurent et al. | 2016
- 392
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Detection of Rare Drug Resistance Mutations by Digital PCR in a Human Influenza A Virus Model System and Clinical SamplesWhale, Alexandra S. / Bushell, Claire A. / Grant, Paul R. / Cowen, Simon / Gutierrez-Aguirre, Ion / O Sullivan, Denise M. / Žel, Jana / Milavec, Mojca / Foy, Carole A. / Nastouli, Eleni et al. | 2016
- 401
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Diagnostic Accuracy of PCR Alone and Compared to Urinary Antigen Testing for Detection of Legionella spp.: a Systematic ReviewAvni, Tomer / Bieber, Amir / Green, Hefziba / Steinmetz, Tali / Leibovici, Leonard / Paul, Mical et al. | 2016
- 412
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Establishment of an Algorithm Using prM/E- and NS1-Specific IgM Antibody-Capture Enzyme-Linked Immunosorbent Assays in Diagnosis of Japanese Encephalitis Virus and West Nile Virus Infections in HumansGalula, Jedhan U. / Chang, Gwong-Jen J. / Chuang, Shih-Te / Chao, Day-Yu et al. | 2016
- 423
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Comparison of Three Biochemical Tests for Rapid Detection of Extended-Spectrum-β-Lactamase-Producing EnterobacteriaceaePoirel, Laurent / Fernández, Javier / Nordmann, Patrice et al. | 2016
- 428
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Diagnostic Performance of Galactomannan Antigen Testing in Cerebrospinal FluidChong, G. M. / Maertens, J. A. / Lagrou, K. / Driessen, G. J. / Cornelissen, J. J. / Rijnders, B. J. A. et al. | 2016
- 432
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Clinical Laboratory Assessment of Mycoplasma genitalium Transcription-Mediated Amplification Using Primary Female Urogenital SpecimensMunson, Erik / Bykowski, Holly / Munson, Kimber L. / Napierala, Maureen / Reiss, Pamela J. / Schell, Ronald F. / Hryciuk, Jeanne E. et al. | 2016
- 439
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Development of an Enzyme-Linked Immunosorbent Assay Based on Fusion VP2~3~3~2~-~4~5~2 Antigen for Detecting Antibodies against Aleutian Mink Disease VirusChen, Xiaowei / Song, Cailing / Liu, Yun / Qu, Liandong / Liu, Dafei / Zhang, Yun / Liu, Ming et al. | 2016
- 443
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Evaluation of the BD Max Enteric Parasite Panel for Clinical DiagnosticsMölling, Paula / Nilsson, Peter / Ennefors, Theresa / Ögren, Jessica / Florén, Kerstin / Hedberg, Sara Thulin / Sundqvist, Martin et al. | 2016
- 445
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Enhanced Tracking of Nosocomial Transmission of Endemic Sequence Type 22 Methicillin-Resistant Staphylococcus aureus Type IV Isolates among Patients and Environmental Sites by Use of Whole-Genome SequencingKinnevey, Peter M. / Shore, Anna C. / Aogáin, Micheál Mac / Creamer, Eilish / Brennan, Gráinne I. / Humphreys, Hilary / Rogers, Thomas R. / O Connell, Brian / Coleman, David C. et al. | 2016
- 449
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A Simple and Safe Protocol for Preparing Brucella Samples for Matrix-Assisted Laser Desorption Ionization—Time of Flight Mass Spectrometry AnalysisMesureur, Jennifer / Ranaldi, Sébastien / Monnin, Valérie / Girard, Victoria / Arend, Sandrine / Welker, Martin / O Callaghan, David / Lavigne, Jean-Philippe / Keriel, Anne et al. | 2016
- 453
-
Comparative Study of a Novel Biochemical Assay, the Rapidec Carba NP Test, for Detecting Carbapenemase-Producing EnterobacteriaceaeLifshitz, Ziv / Adler, Amos / Carmeli, Yehuda et al. | 2016
- 457
-
BioFire FilmArray Respiratory Panel for Detection of EnterovirusShibib, Dena R. / Matushek, Scott M. / Beavis, Kathleen G. / Gawel, Susan H. / Charnot-Katsikas, Angella et al. | 2016
- 460
-
Performance of the Cryptococcal Antigen Lateral Flow Assay in Non-HIV-Related CryptococcosisJitmuang, Anupop / Panackal, Anil A. / Williamson, Peter R. / Bennett, John E. / Dekker, John P. / Zelazny, Adrian M. et al. | 2016
- 464
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Detection of Carbapenemase Production in a Collection of Enterobacteriaceae with Characterized Resistance Mechanisms from Clinical and Environmental Origins by Use of Both Carba NP and Blue-Carba TestsGarcía-Fernández, Sergio / Morosini, María-Isabel / Gijón, Desirèe / Beatobe, Lorena / Ruiz-Garbajosa, Patricia / Domínguez, Lucas / Cantón, Rafael / Valverde, Aránzazu et al. | 2016
- 467
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Use of an Enrichment Broth Improves Detection of Extended-Spectrum-Beta-Lactamase-Producing Enterobacteriaceae in Clinical Stool SamplesJazmati, Nathalie / Hein, Rebecca / Hamprecht, Axel et al. | 2016
- 471
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Evaluation of an Immunochromatographic Lateral Flow Assay (OXA-48 K-SeT) for Rapid Detection of OXA-48-Like Carbapenemases in EnterobacteriaceaeWareham, David W. / Shah, Rishita / Betts, Jonathan W. / Phee, Lynette M. / Abdul Momin, Muhd Haziq F. et al. | 2016
- 474
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Does the Capsule Interfere with Performance of Matrix-Assisted Laser Desorption Ionization—Time of Flight Mass Spectrometry for Identification of Cryptococcus neoformans and Cryptococcus gattii?Thomaz, Danilo Y. / Grenfell, Rafaella C. / Vidal, Monica S. M. / Giudice, Mauro C. / Del Negro, Gilda M. B. / Juliano, Luiz / Benard, Gil / de Almeida Júnior, João N. et al. | 2016
- 478
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Implementation of a Consensus Set of Hypervariable Mycobacterial Interspersed Repetitive-Unit—Variable-Number Tandem-Repeat Loci in Mycobacterium tuberculosis Molecular EpidemiologyTrovato, Alberto / Tafaj, Silva / Battaglia, Simone / Alagna, Riccardo / Bardhi, Donika / Kapisyzi, Perlat / Bala, Silvana / Haldeda, Migena / Borroni, Emanuele / Hafizi, Hasan et al. | 2016
- 483
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SNaPBceBcon: a Practical Tool for Identification and Genotyping of Burkholderia cepacia and Burkholderia contaminansAraujo, Ricardo / Caramalho, Rita / Coutinho, Carla / Sá-Correia, Isabel et al. | 2016
- 489
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Development and Validation of a PCR Assay To Detect the Prairie Epidemic Strain of Pseudomonas aeruginosa from Patients with Cystic FibrosisWorkentine, M. / Poonja, A. / Waddell, B. / Duong, J. / Storey, D. G. / Gregson, D. / Somayaji, R. / Rabin, H. R. / Surette, M. G. / Parkins, M. D. et al. | 2016
- 492
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Laboratory Evaluation of a Dual-Path Platform Assay for Rapid Point-of-Care HIV and Syphilis TestingLeon, S. R. / Ramos, L. B. / Vargas, S. K. / Kojima, N. / Perez, D. G. / Caceres, C. F. / Klausner, J. D. et al. | 2016
- 495
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Improved Matrix-Assisted Laser Desorption Ionization—Time of Flight Mass Spectrometry (MALDI-TOF MS)-Based Identification of Mycobacterium spp. by Use of a Novel Two-Step Cell Disruption Preparatory TechniqueO Connor, J. A. / Lynch-Healy, M. / Corcoran, D. / O Reilly, B. / O Mahony, J. / Lucey, B. et al. | 2016
- 497
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An Improved One-Step Real-Time Reverse Transcription-PCR Assay for Detection of NorovirusGlowacka, Ilona / Harste, Gabrielle / Witthuhn, Jennifer / Heim, Albert et al. | 2016
- 500
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Suboptimal Trichomonas vaginalis Antigen Test Performance in a Low-Prevalence Sexually Transmitted Infection CommunityMunson, Kimber L. / Napierala, Maureen / Munson, Erik et al. | 2016
- 502
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Case Reports May Be Declared Dead by the Journal of Clinical Microbiology, but They Are Alive and Well in JMM Case ReportsKusters, Johannes G. / Hall, Robert H. et al. | 2016
- 503
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Reply to ``Case Reports May Be Declared Dead by the Journal of Clinical Microbiology, but They Are Alive and Well in JMM Case Reports''McAdam, Alexander J. et al. | 2016
- 504
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Pleural Fluid and Tuberculosis: Are All Interferon Gamma Release Assays Equal?Hofland, Regina W. / Bossink, Aik W. J. / Lammers, Jan-Willem J. / Thijsen, Steven F. T. et al. | 2016
- 506
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Reply to ``Pleural Fluid and Tuberculosis: Are All Interferon Gamma Release Assays Equal?''Aggarwal, Ashutosh N. / Agarwal, Ritesh / Dhooria, Sahajal / Behera, Digambar et al. | 2016
- 510
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Answer to Photo QuizRamanan, Poornima / Wengenack, Nancy L. / Pritt, Bobbi S. et al. | 2016