FoldSynth: Interactive 2D/3D Visualisation Platform for Molecular Strands (Unknown language)

in Eurographics Workshop on Visual Computing for Biology and Medicine ; 41-50
Eurographics Workshop on Visual Computing for Biology and Medicine

FoldSynth is an interactive platform designed to help understand the characteristics and commonly used visual abstractions of molecular strands with an emphasis on proteins and DNA. It uses a simple model of molecular forces to give real time interactive animations of the folding and docking processes. The shape of a molecular strand is shown as a 3D visualisation floating above a 2D triangular matrix representing distance constraints, contact maps or other features of residue pairs. As well as more conventional raster plots, contact maps can be shown with vectors representing the grouping of contacts as secondary structures. The 2D visualisation is also interactive and can be used to manipulate a molecule, define constraints, control and view the folding dynamically, or even design new molecules. While the 3D visualisation is more realistic showing a molecule representation approximating the physical behavior and spatial properties, the 2D visualisation offers greater visibility, in that all molecular positions (and pairings) are always in view; the 3D mode may suffer occlusions and create complex views which are typically hard to understand to humans.

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The table of contents of the conference proceedings is generated automatically, so it can be incomplete, although all articles are available in the TIB.

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Image Registration Methods for Patient-Specific Virtual Physiological Human Models
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Todd, Stephen / Todd, Peter / Leymarie, Frederic Fol / Latham, William / Kelley, Lawrence A. / Sternberg, Michael / Hugues, Jim / Taylor, Stephen | 2015
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Interactive Position-dependent Customization of Transfer Function Classification Parameters in Volume Rendering
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Motion-moderated Transfer Function for Volume Rendering 4D CMR Data
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Automated Slice-Based Artery Identification in Various Field-of-View CTA Scans
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A Two-Level Cascade Classification Algorithm for Real-Time Bifurcation Detection in CTA Images of Blood Vessels
Novikov, Alexey A. / Wimmer, Maria / Major, David / Bühler, Katja | 2015
A Survey of Cardiac 4D PC-MRI Data Processing
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Simulation-based Ultrasound Training Supported by Annotations, Haptics and Linked Multimodal Views
Law, Yuen C. / Knott, Thomas / Pick, Sebastian / Weyers, Benjamin / Kuhlen, Torsten W. | 2015
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Visualisation of PET data in the Fly Algorithm
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Simulated Motion Artefact in Computed Tomography
Vidal, Franck P. / Villard, Pierre-Frédéric | 2015
A Haptics-enabled Simulator for Transperineal Ultrasound-Guided Biopsy
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A Statistical Method for Surface Detection
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