Interactive Exploded Views for Molecular Structures (Unknown language)

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We propose an approach to interactively create exploded views of molecular structures with the goal to help domain experts in their design process and provide them with a meaningful visual representation of component relationships. Exploded views are excellently suited to manage visual occlusion of structure components, which is one of the main challenges when visualizing complex 3D data. In this paper, we discuss four key parameters of an exploded view: explosion distance, direction, order, and the selection of explosion components. We propose two strategies, namely the structure-derived exploded view and the interactive free-form exploded view, for computing these four parameters systematically. The first strategy allows scientists to automatically create exploded views by computing the parameters from the given object structures. The second strategy further supports them to design and customize detailed explosion paths through user interaction. Our approach features the possibility to animate exploded views, to incorporate ease functions into these animations and to display the explosion path of components via arrows. Finally, we demonstrate three use cases with various challenges that we investigated in collaboration with a domain scientist. Our approach, therefore, provides interesting new ways of investigating and presenting the design layout and composition of complex molecular structures.

Table of contents conference proceedings

The tables of contents are generated automatically and are based on the data records of the individual contributions available in the index of the TIB portal. The display of the Tables of Contents may therefore be incomplete.

1
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17
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27
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33
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45
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51
Feasibility Study For Automatic Bird Tracking and Visualization from Time-Dependent Marine Radar Imagery
Ganglberger, Florian / Bühler, Katja | 2019
57
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Jönsson, Daniel / Bergström, Albin / Forsell, Camilla / Simon, Rozalyn / Engström, Maria / Ynnerman, Anders / Hotz, Ingrid | 2019
69
Pelvis Runner: Visualizing Pelvic Organ Variability in a Cohort of Radiotherapy Patients
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79
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Bernold, Georg / Matkovic, Kresimir / Gröller, Eduard / Raidou, Renata Georgia | 2019
91
A Visual Analytics Approach for Patient Stratification and Biomarker Discovery
Alemzadeh, Shiva / Kromp, Florian / Preim, Bernhard / Taschner-Mandl, Sabine / Bühler, Katja | 2019
97
MedUse: A Visual Analysis Tool for Medication Use Data in the ABCD Study
Bartsch, Hauke / Garrison, Laura / Bruckner, Stefan / Wang, Ariel / Tapert, Susan F. / Grüner, Renate | 2019
103
Interactive Exploded Views for Molecular Structures
Sbardellati, Maximilian / Miao, Haichao / Wu, Hsiang-Yun / Gröller, Eduard / Barisic, Ivan / Viola, Ivan | 2019
113
DockVis: Visual Analysis of Molecular Docking Data
Furmanová, Katarína / Kozlíková, Barbora / Vonásek, Vojtěch / Byška, Jan | 2019
123
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Weiss, Jakob / Eck, Ulrich / Nasseri, Muhamad Ali / Maier, Mathias / Eslami, Abouzar / Navab, Nassir | 2019
129
Visual Analytics in Digital Pathology: Challenges and Opportunities
Corvò, Alberto / Westenberg, Michel A. / Wimberger-Friedl, Reinhold / Fromme, Stephan / Peeters, Michel M. R. / Driel, Marc A. van / Wijk, Jarke J. van | 2019
145
Medical Animations: A Survey and a Research Agenda
Preim, Bernhard / Meuschke, Monique | 2019
165
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Walczak, Lars / Georgii, Joachim / Tautz, Lennart / Neugebauer, Mathias / Wamala, Isaac / Sündermann, Simon / Falk, Volkmar / Hennemuth, Anja | 2019
177
InkVis: A High-Particle-Count Approach for Visualization of Phase-Contrast Magnetic Resonance Imaging Data
Hoon, Niels H. L. C. de / Lawonn, Kai / Jalba, Andrei C. / Eisemann, Elmar / Vilanova, Anna | 2019
189
Robustness Evaluation of CFD Simulations to Mesh Deformation
Scheid-Rehder, Alexander / Lawonn, Kai / Meuschke, Monique | 2019
201
The Vitruvian Baby: Interactive Reformation of Fetal Ultrasound Data to a T-Position
Mörth, Eric / Raidou, Renata Georgia / Viola, Ivan / Smit, Noeska N. | 2019
207
HIFUpm: a Visual Environment to Plan and Monitor High Intensity Focused Ultrasound Treatments
Modena, Daniela / Bassano, Davide / Elevelt, Aaldert / Baragona, Marco / Hilbers, Peter A. J. / Westenberg, Michel A. | 2019
213
Hybrid Visualization of Protein-Lipid and Protein-Protein Interaction
Alharbi, Naif / Krone, Michael / Chavent, Matthieu / Laramee, Robert S. | 2019
225
Molecular Sombreros: Abstract Visualization of Binding Sites within Proteins
Schatz, Karsten / Krone, Michael / Bauer, Tabea L. / Ferrario, Valerio / Pleiss, Jürgen / Ertl, Thomas | 2019
239
Interactive CPU-based Ray Tracing of Solvent Excluded Surfaces
Rau, Tobias / Zahn, Sebastian / Krone, Michael / Reina, Guido / Ertl, Thomas | 2019
253
Evolutionary Pathlines for Blood Flow Exploration in Cerebral Aneurysms
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265
Distance Field Visualization and 2D Abstraction of Vessel Tree Structures with on-the-fly Parameterization
Lichtenberg, Nils / Krayer, Bastian / Hansen, Christian / Müller, Stefan / Lawonn, Kai | 2019
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