Cooperativity in Scapharca Dimeric Hemoglobin: Simulation of Binding Intermediates and Elucidation of the Role of Interfacial Water (Englisch)
- Neue Suche nach: Zhou, Y.
- Neue Suche nach: Zhou, H.
- Neue Suche nach: Karplus, M.
- Neue Suche nach: Zhou, Y.
- Neue Suche nach: Zhou, H.
- Neue Suche nach: Karplus, M.
In:
JOURNAL OF MOLECULAR BIOLOGY
;
326
;
593-606
;
2003
-
ISSN:
- Aufsatz (Zeitschrift) / Print
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Titel:Cooperativity in Scapharca Dimeric Hemoglobin: Simulation of Binding Intermediates and Elucidation of the Role of Interfacial Water
-
Beteiligte:
-
Erschienen in:JOURNAL OF MOLECULAR BIOLOGY ; 326 ; 593-606
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Verlag:
- Neue Suche nach: ACADEMIC PRESS
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Erscheinungsdatum:01.01.2003
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Format / Umfang:14 pages
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ISSN:
-
Medientyp:Aufsatz (Zeitschrift)
-
Format:Print
-
Sprache:Englisch
- Neue Suche nach: 572.8
- Weitere Informationen zu Dewey Decimal Classification
-
Klassifikation:
DDC: 572.8 -
Datenquelle:
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- 1013
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Mycobacterium tuberculosis Hsp16.3 Nonamers are Assembled and Re-assembled via Trimer and Hexamer IntermediatesAbulimiti, Abuduaini / Fu, Xinmiao / Gu, Liangcai / Feng, Xiuguang / Chang, Zengyi et al. | 2002
- 1025
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Substrate Complexes of Hepatitis C Virus RNA Polymerase (HC-J4): Structural Evidence for Nucleotide Import and De-novo InitiationO'Farrell, Damien / Trowbridge, Rachel / Rowlands, David / Jäger, Joachim et al. | 2002
- 1037
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Refined Solution Structure of the Iron-responsive Element RNA Using Residual Dipolar CouplingsMcCallum, Scott A. / Pardi, Arthur et al. | 2002
- 1051
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The Metal-independent Type IIs Restriction Enzyme BfiI is a Dimer that Binds Two DNA Sites but has Only One Catalytic CentreLagunavicius, Arunas / Sasnauskas, Giedrius / Halford, Stephen E / Siksnys, Virginijus et al. | 2002
- 1065
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Annotating Nucleic Acid-Binding Function Based on Protein StructureStawiski, Eric W. / Gregoret, Lydia M. / Mandel-Gutfreund, Yael et al. | 2002
- 1081
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The Fission Yeast spSet1p is a Histone H3-K4 Methyltransferase that Functions in Telomere Maintenance and DNA Repair in an ATM Kinase Rad3-dependent PathwayKanoh, Junko / Francesconi, Stefania / Collura, Ada / Schramke, Vera / Ishikawa, Fuyuki / Baldacci, Giuseppe / Géli, Vincent et al. | 2002
- 1095
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Unpaired Structures in SCA10 (ATTCT)n·(AGAAT)n RepeatsPotaman, Vladimir N. / Bissler, John J. / Hashem, Vera I. / Oussatcheva, Elena A. / Lu, Lu / Shlyakhtenko, Luda S. / Lyubchenko, Yuri L. / Matsuura, Tohru / Ashizawa, Tetsuo / Leffak, Michael et al. | 2002
- 1113
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Pausing of DNA Polymerases on Duplex DNA Templates due to Ligand Binding in VitroSmolina, Irina V / Demidov, Vadim V / Frank-Kamenetskii, Maxim D et al. | 2002
- 1127
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LINE-1 preTa Elements in the Human GenomeSalem, Abdel-Halim / Myers, Jeremy S. / Otieno, Anthony C. / Scott Watkins, W. / Jorde, Lynn B. / Batzer, Mark A. et al. | 2002
- 1147
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Full-length Rat Amylin Forms Fibrils Following Substitution of Single Residues from Human AmylinGreen, Janelle / Goldsbury, Claire / Mini, Thierry / Sunderji, Shabir / Frey, Peter / Kistler, Joerg / Cooper, Garth / Aebi, Ueli et al. | 2002
- 1157
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Crystal Structure Of MHC Class II I-Ab in Complex with a Human CLIP Peptide: Prediction of an I-Ab Peptide-binding MotifZhu, Yuerong / Rudensky, Alexander Y. / Corper, Adam L. / Teyton, Luc / Wilson, Ian A. et al. | 2002
- 1175
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Crystal Structure of Geneticin Bound to a Bacterial 16S Ribosomal RNA A Site OligonucleotideVicens, Quentin / Westhof, Eric et al. | 2002
- 1189
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Solution Structure of the Cytotoxic RNase 4 from Oocytes of Bullfrog Rana catesbeianaHsu, Chun-Hua / Liao, You-Di / Pan, Yun-Ru / Chen, Lih-Woan / Wu, Shih-Hsiung / Leu, Ying-Jen / Chen, Chinpan et al. | 2002
- 1203
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Crystal Structure of HPr Kinase/Phosphatase from Mycoplasma pneumoniaeAllen, Gregory S. / Steinhauer, Katrin / Hillen, Wolfgang / Stülke, Jörg / Brennan, Richard G. et al. | 2002
- 1219
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X-ray Structure of a Maquette ScaffoldHuang, Steve S. / Gibney, Brian R. / Stayrook, Steven E. / Leslie Dutton, P. / Lewis, Mitchell et al. | 2002
- 1227
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Effect of Dextran on Protein Stability and Conformation Attributed to Macromolecular CrowdingSasahara, Kenji / McPhie, Peter / Minton, Allen P. et al. | 2002
- 1239
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An Orientation-dependent Hydrogen Bonding Potential Improves Prediction of Specificity and Structure for Proteins and Protein–Protein ComplexesKortemme, Tanja / Morozov, Alexandre V. / Baker, David et al. | 2002
- 1261
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Rapid Cooperative Two-state Folding of a Miniature α–β Protein and Design of a Thermostable VariantHorng, Jia-Cherng / Moroz, Viktor / Raleigh, Daniel P et al. | 2002
- 1261
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Rapid Cooperative Two-state Folding of a Miniature a-b Protein and Design of a Thermostable VariantHorng, Jia-Cherng et al. | 2003
- 1261
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Rapid Cooperative Two-state Folding of a Miniature alpha-beta Protein and Design of a Thermostable VariantHorng, J.-C. / Moroz, V. / Raleigh, D. P. et al. | 2003
- 1271
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The Thermodynamics of Protein-Protein Recognition as Characterized by a Combination of Volumetric and Calorimetric Techniques: The Binding of Turkey Ovomucoid Third Domain to alpha-ChymotrypsinFilfil, R. / Chalikian, T. V. et al. | 2003
- 1271
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The Thermodynamics of Protein–Protein Recognition as Characterized by a Combination of Volumetric and Calorimetric Techniques: The Binding of Turkey Ovomucoid Third Domain to α-ChymotrypsinFilfil, Rana / Chalikian, Tigran V et al. | 2002
- 1271
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The Thermodynamics of Protein-Protein Recognition as Characterized by a Combination of Volumetric and Calorimetric Techniques: The Binding of Turkey Ovomucoid Third Domain to a-ChymotrypsinFilfil, Rana et al. | 2003
- 1289
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Automatic Methods for Predicting Functionally Important Residuesdel Sol Mesa, Antonio / Pazos, Florencio / Valencia, Alfonso et al. | 2002
- 1307
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A Model for Statistical Significance of Local Similarities in StructureStark, Alexander / Sunyaev, Shamil / Russell, Robert B. et al. | 2002
- 1317
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A Calcium-driven Conformational Switch of the N-terminal and Core Domains of Annexin A1Rosengarth, Anja / Luecke, Hartmut et al. | 2002
- 1327
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Comparative Promoter Analysis and its Application in Analysis of PTH-regulated Gene ExpressionQiu, Ping / Qin, Ling / Sorrentino, Richard P. / Greene, Jonathan R. / Wang, Luquan et al. | 2003
- 1337
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Characterisation of a Non-canonical Genetic Code in the Oxymonad Streblomastix strixKeeling, Patrick J. / Leander, Brian S. et al. | 2003
- 1351
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Active-site Copper and Zinc Ions Modulate the Quaternary Structure of Prokaryotic Cu,Zn Superoxide DismutaseCioni, P / Pesce, A / Morozzo della Rocca, B / Castelli, S / Falconi, M / Parrilli, L / Bolognesi, M / Strambini, G / Desideri, A et al. | 2003
- 1361
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RpoD Promoters in Campylobacter jejuni Exhibit a Strong Periodic Signal Instead of a −35 BoxPetersen, Lise / Larsen, Thomas S. / Ussery, David W. / On, Stephen L.W. / Krogh, Anders et al. | 2002
- 1373
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Coupling of Drug Protonation to the Specific Binding of Aminoglycosides to the A Site of 16S rRNA: Elucidation of the Number of Drug Amino Groups Involved and their IdentitiesKaul, Malvika / Barbieri, Christopher M / Kerrigan, John E / Pilch, Daniel S et al. | 2002
- 1389
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The Effect of Tautomeric Constant on the Specificity of Nucleotide Incorporation during DNA Replication: Support for the Rare Tautomer Hypothesis of Substitution MutagenesisHarris, Victoria H. / Smith, Clifford L. / Jonathan Cummins, W. / Hamilton, Alan L. / Adams, Harry / Dickman, Mark / Hornby, David P. / Williams, David M. et al. | 2003
- 1403
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DNA Polymerase X of African Swine Fever Virus: Insertion Fidelity on Gapped DNA substrates and AP lyase Activity Support a Role in Base Excision Repair of Viral DNAGarcı́a-Escudero, Ramón / Garcı́a-Dı́az, Miguel / Salas, Marı́a L / Blanco, Luis / Salas, José et al. | 2002
- 1413
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Visualizing RNA Extrusion and DNA Wrapping in Transcription Elongation Complexes of Bacterial and Eukaryotic RNA PolymerasesRivetti, Claudio / Codeluppi, Simone / Dieci, Giorgio / Bustamante, Carlos et al. | 2002
- 1427
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The ScPex13p SH3 Domain Exposes Two Distinct Binding Sites for Pex5p and Pex14pPires, José R. / Hong, Xinji / Brockmann, Christoph / Volkmer-Engert, Rudolf / Schneider-Mergener, Jens / Oschkinat, Hartmut / Erdmann, Ralf et al. | 2002
- 1437
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A Comprehensive View on Proteasomal Sequences: Implications for the Evolution of the ProteasomeGille, Christoph / Goede, Andrean / Schlöetelburg, Cord / Preißner, Robert / Kloetzel, Peter-Michael / Göbel, Ulf B. / Frömmel, Cornelius et al. | 2002
- 1449
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Differential Action of Natural Selection on the N and C-terminal Domains of 2′-5′ Oligoadenylate Synthetases and the Potential Nuclease Function of the C-terminal DomainRogozin, Igor B. / Aravind, L. / Koonin, Eugene V. et al. | 2003
- 1463
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Crystal Structure of Schizosaccharomyces pombe Riboflavin Kinase Reveals a Novel ATP and Riboflavin-Binding FoldBauer, Stefanie / Kemter, Kristina / Bacher, Adelbert / Huber, Robert / Fischer, Markus / Steinbacher, Stefan et al. | 2003
- 1475
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Engineered Fibronectin Type III Domain with a RGDWXE Sequence Binds with Enhanced Affinity and Specificity to Human alphavbeta3 IntegrinRichards, J. / Miller, M. / Abend, J. / Koide, A. / Koide, S. / Dewhurst, S. et al. | 2003
- 1475
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Engineered Fibronectin Type III Domain with a RGDWXE Sequence Binds with Enhanced Affinity and Specificity to Human αvβ3 IntegrinRichards, Julie / Miller, Michelle / Abend, Johanna / Koide, Akiko / Koide, Shohei / Dewhurst, Stephen et al. | 2003
- 1475
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Engineered Fibronectin Type III Domain with a RGDWXE Sequence Binds with Enhanced Affinity and Specificity to Human avb3 IntegrinRichards, Julie et al. | 2003
- 1489
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On the Interaction Between gp41 and Membranes: The Immunodominant Loop Stabilizes gp41 Helical Hairpin ConformationPeisajovich, Sergio G / Blank, Lior / Epand, Raquel F / Epand, Richard M / Shai, Yechiel et al. | 2002
- 1503
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Crystal Structures of Aspergillus oryzae Aspartic Proteinase and its Complex with an Inhibitor Pepstatin at 1.9°A ResolutionKamitori, Shigehiro et al. | 2003
- 1503
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Crystal Structures of Aspergillus oryzae Aspartic Proteinase and its Complex with an Inhibitor Pepstatin at 1.9Å ResolutionKamitori, Shigehiro / Ohtaki, Akashi / Ino, Hironori / Takeuchi, Michio et al. | 2003
- 1503
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Crystal Structures of Aspergillus oryzae Aspartic Proteinase and its Complex with an Inhibitor Pepstatin at 1.9 Angstrom ResolutionKamitori, S. / Ohtaki, A. / Ino, H. / Takeuchi, M. et al. | 2003
- 1513
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P but not R-axis Interface is Involved in Cooperative Binding of NAD on Tetrameric Phosphorylating Glyceraldehyde-3-phosphate Dehydrogenase from Bacillus stearothermophilusRoitel, Olivier / Vachette, Patrice / Azza, Said / Branlant, Guy et al. | 2003
- 1523
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The Structure and Thermal Motion of the B800-850 LH2 Complex from Rps. acidophila at 2.0 Angstrom Resolution and 100 K: New Structural Features and Functionally Relevant MotionsPapiz, M. Z. / Prince, S. M. / Howard, T. / Cogdell, R. J. / Isaacs, N. W. et al. | 2003
- 1523
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The Structure and Thermal Motion of the B800–850 LH2 Complex from Rps.acidophila at 2.0Å Resolution and 100K: New Structural Features and Functionally Relevant MotionsPapiz, Miroslav Z. / Prince, Steve M. / Howard, Tina / Cogdell, Richard J. / Isaacs, Neil W. et al. | 2002
- 1523
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The Structure and Thermal Motion of the B800-850 LH2 Complex from Rps.acidophila at 2.0°A Resolution and 100K: New Structural Features and Functionally Relevant MotionsPapiz, Miroslav Z. et al. | 2003
- 1539
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Distinctive Solution Conformation of Phosphatase Inhibitor CPI-17 Substituted with Aspartate at the Phosphorylation-site Threonine ResidueOhki, Shin-ya / Eto, Masumi / Shimizu, Masato / Takada, Rei / Brautigan, David L. / Kainosho, Masatsune et al. | 2003
- 1549
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NMR Structure of the Human Doppel ProteinLührs, Thorsten / Riek, Roland / Güntert, Peter / Wüthrich, Kurt et al. | 2002
- 1559
-
Structure and Function of an Archaeal Homolog of Survival Protein E (SurEalpha): An Acid Phosphatase with Purine Nucleotide SpecificityMura, C. / Katz, J. E. / Clarke, S. G. / Eisenberg, D. et al. | 2003
- 1559
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Structure and Function of an Archaeal Homolog of Survival Protein E (SurEα): An Acid Phosphatase with Purine Nucleotide SpecificityMura, Cameron / Katz, Jonathan E. / Clarke, Steven G. / Eisenberg, David et al. | 2002
- 1559
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Structure and Function of an Archaeal Homolog of Survival Protein E (SurEa): An Acid Phosphatase with Purine Nucleotide SpecificityMura, Cameron et al. | 2003
- 1577
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Improving the Thermodynamic Stability of the Leucine Zipper of Max Increases the Stability of its b-HLH-LZ:E-box complexJean-François, Naud / Frédéric, Gagnon / Raymund, Wellinger / Benoit, Chabot / Lavigne, Pierre et al. | 2002
- 1597
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Quantitative Analysis of Aspartate Receptor Signaling Complex Reveals that the Homogeneous Two-state Model is Inadequate: Development of a Heterogeneous Two-state ModelBornhorst, Joshua A / Falke, Joseph J et al. | 2002
- 1615
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Computational Simulation of the Statistical Properties of Unfolded ProteinsGoldenberg, David P et al. | 2002
- 1635
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Sub-atomic Resolution Crystal Structure of Cholesterol Oxidase: What Atomic Resolution Crystallography Reveals about Enzyme Mechanism and the Role of the FAD Cofactor in Redox ActivityLario, Paula I. / Sampson, Nicole / Vrielink, Alice et al. | 2002
- 1651
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Efficient Conformational Sampling of Local Side-chain FlexibilityKällblad, Per / Dean, Philip M. et al. | 2002
- i
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Editorial board| 2003
- ii
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Contents list| 2003