ExDom: an integrated database for comparative analysis of the exon–intron structures of protein domains in eukaryotes (Englisch)
- Neue Suche nach: Bhasi, A.
- Neue Suche nach: Philip, P.
- Neue Suche nach: Manikandan, V.
- Neue Suche nach: Senapathy, P.
- Neue Suche nach: Bhasi, A.
- Neue Suche nach: Philip, P.
- Neue Suche nach: Manikandan, V.
- Neue Suche nach: Senapathy, P.
In:
NUCLEIC ACIDS RESEARCH
;
37 supp/1
;
D703-D711
;
2009
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ISSN:
- Aufsatz (Zeitschrift) / Print
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Titel:ExDom: an integrated database for comparative analysis of the exon–intron structures of protein domains in eukaryotes
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Beteiligte:Bhasi, A. ( Autor:in ) / Philip, P. ( Autor:in ) / Manikandan, V. ( Autor:in ) / Senapathy, P. ( Autor:in )
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Erschienen in:NUCLEIC ACIDS RESEARCH ; 37 supp/1 ; D703-D711
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Verlag:
- Neue Suche nach: Oxford University Press
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Erscheinungsdatum:01.01.2009
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Format / Umfang:D703-D711
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ISSN:
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Medientyp:Aufsatz (Zeitschrift)
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Format:Print
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Sprache:Englisch
- Neue Suche nach: 574.8732 / 574
- Weitere Informationen zu Dewey Decimal Classification
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Klassifikation:
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Datenquelle:
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tRNADB-CE: tRNA gene database curated manually by expertsAbe, T. / Ikemura, T. / Ohara, Y. / Uehara, H. / Kinouchi, M. / Kanaya, S. / Yamada, Y. / Muto, A. / Inokuchi, H. et al. | 2009
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The Universal Protein Resource (UniProt) 2009| 2009
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CentrosomeDB: a human centrosomal proteins databaseNogales-Cadenas, R. x. / Abascal, F. / Dí / ez-Pé / rez, J. / Carazo, J. x. / Pascual-Montano, A. et al. | 2009
- D181
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NOPdb: Nucleolar Proteome Database—2008 updateAhmad, Y. / Boisvert, F. x. / Gregor, P. / Cobley, A. / Lamond, A. I. et al. | 2009
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SuperSite: dictionary of metabolite and drug binding sites in proteinsBauer, R. A. / Gü / nther, S. / Jansen, D. / Heeger, C. / Thaben, P. F. / Preissner, R. et al. | 2009
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SysZNF: the C2H2 zinc finger gene databaseDing, G. / Lorenz, P. / Kreutzer, M. / Li, Y. / Thiesen, H. J. et al. | 2009
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The Transporter Classification Database: recent advancesSaier, M. H. / Yen, M. R. / Noto, K. / Tamang, D. G. / Elkan, C. et al. | 2009
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SuperToxic: a comprehensive database of toxic compoundsSchmidt, U. / Struck, S. / Gruening, B. / Hossbach, J. / Jaeger, I. S. / Parol, R. / Lindequist, U. / Teuscher, E. / Preissner, R. et al. | 2009
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Human immunodeficiency virus type 1, human protein interaction database at NCBIFu, W. / Sanders-Beer, B. E. / Katz, K. S. / Maglott, D. R. / Pruitt, K. D. / Ptak, R. G. et al. | 2009
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Strepto-DB, a database for comparative genomics of group A (GAS) and B (GBS) streptococci, implemented with the novel database platform ‘Open Genome Resource’ (OGeR)Klein, J. / Mü / nch, R. / Biegler, I. / Haddad, I. / Retter, I. / Jahn, D. et al. | 2009
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TB database: an integrated platform for tuberculosis researchReddy, T. B. / Riley, R. / Wymore, F. / Montgomery, P. / DeCaprio, D. / Engels, R. / Gellesch, M. / Hubble, J. / Jen, D. / Jin, H. et al. | 2009
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Aspergillus Genomes and the Aspergillus CloudMabey Gilsenan, J. E. / Atherton, G. / Bartholomew, J. / Giles, P. F. / Attwood, T. K. / Denning, D. W. / Bowyer, P. et al. | 2009
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dictyBase—a Dictyostelium bioinformatics resource updateFey, P. / Gaudet, P. / Curk, T. / Zupan, B. / Just, E. M. / Basu, S. / Merchant, S. N. / Bushmanova, Y. A. / Shaulsky, G. / Kibbe, W. A. et al. | 2009
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Full-Malaria/Parasites and Full-Arthropods: databases of full-length cDNAs of parasites and arthropods, update 2009Wakaguri, H. / Suzuki, Y. / Katayama, T. / Kawashima, S. / Kibukawa, E. / Hiranuka, K. / Sasaki, M. / Sugano, S. / Watanabe, J. et al. | 2009
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GiardiaDB and TrichDB: integrated genomic resources for the eukaryotic protist pathogens Giardia lamblia and Trichomonas vaginalisAurrecoechea, C. / Brestelli, J. / Brunk, B. P. / Carlton, J. M. / Dommer, J. / Fischer, S. / Gajria, B. / Gao, X. / Gingle, A. / Grant, G. et al. | 2009
- D531
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metaTIGER: a metabolic evolution resourceWhitaker, J. W. / Letunic, I. / McConkey, G. A. / Westhead, D. R. et al. | 2009
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PlasmoDB: a functional genomic database for malaria parasitesAurrecoechea, C. / Brestelli, J. / Brunk, B. P. / Dommer, J. / Fischer, S. / Gajria, B. / Gao, X. / Gingle, A. / Grant, G. / Harb, O. S. et al. | 2009
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TcSNP: a database of genetic variation in Trypanosoma cruziAckermann, A. A. / Carmona, S. J. / Agü / ero, F. x. et al. | 2009
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FlyBase: enhancing Drosophila Gene Ontology annotationsTweedie, S. / Ashburner, M. / Falls, K. / Leyland, P. / McQuilton, P. / Marygold, S. / Millburn, G. / Osumi-Sutherland, D. / Schroeder, A. / Seal, R. et al. | 2009
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FlyEx, the quantitative atlas on segmentation gene expression at cellular resolutionPisarev, A. / Poustelnikova, E. / Samsonova, M. / Reinitz, J. et al. | 2009
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FLYSNPdb: a high-density SNP database of Drosophila melanogasterChen, D. / Berger, J. x. / Fellner, M. / Suzuki, T. et al. | 2009
- D571
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Nematode.net update 2008: improvements enabling more efficient data mining and comparative nematode genomicsMartin, J. / Abubucker, S. / Wylie, T. / Yin, Y. / Wang, Z. / Mitreva, M. et al. | 2009
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SchistoDB: a Schistosoma mansoni genome resourceZerlotini, A. / Heiges, M. / Wang, H. / Moraes, R. L. / Dominitini, A. J. / Ruiz, J. x. / Kissinger, J. C. / Oliveira, G. et al. | 2009
- D583
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VectorBase: a data resource for invertebrate vector genomicsLawson, D. / Arensburger, P. / Atkinson, P. / Besansky, N. J. / Bruggner, R. V. / Butler, R. / Campbell, K. S. / Christophides, G. K. / Christley, S. / Dialynas, E. et al. | 2009
- D588
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BRENDA, AMENDA and FRENDA the enzyme information system: new content and tools in 2009Chang, A. / Scheer, M. / Grote, A. / Schomburg, I. / Schomburg, D. et al. | 2009
- D593
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ExplorEnz: the primary source of the IUBMB enzyme listMcDonald, A. G. / Boyce, S. x. / Tipton, K. F. et al. | 2009
- D598
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Bionemo: molecular information on biodegradation metabolismCarbajosa, G. / Trigo, A. / Valencia, A. / Cases, I. et al. | 2009
- D603
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HMDB: a knowledgebase for the human metabolomeWishart, D. S. / Knox, C. / Guo, A. C. / Eisner, R. / Young, N. / Gautam, B. / Hau, D. D. / Psychogios, N. / Dong, E. / Bouatra, S. et al. | 2009
- D611
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PMAP: databases for analyzing proteolytic events and pathwaysIgarashi, Y. / Heureux, E. / Doctor, K. S. / Talwar, P. / Gramatikova, S. / Gramatikoff, K. / Zhang, Y. / Blinov, M. / Ibragimova, S. S. / Boyd, S. et al. | 2009
- D619
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Reactome knowledgebase of human biological pathways and processesMatthews, L. / Gopinath, G. / Gillespie, M. / Caudy, M. / Croft, D. / de Bono, B. / Garapati, P. / Hemish, J. / Hermjakob, H. / Jassal, B. et al. | 2009
- D623
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ConsensusPathDB—a database for integrating human functional interaction networksKamburov, A. / Wierling, C. / Lehrach, H. / Herwig, R. et al. | 2009
- D629
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EcID. A database for the inference of functional interactions in E. coliAndres Leon, E. / Ezkurdia, I. / Garcí / a, B. / Valencia, A. / Juan, D. et al. | 2009
- D636
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Update of KDBI: Kinetic Data of Bio-molecular Interaction databaseKumar, P. / Han, B. C. / Shi, Z. / Jia, J. / Wang, Y. P. / Zhang, Y. T. / Liang, L. / Liu, Q. F. / Ji, Z. L. / Chen, Y. Z. et al. | 2009
- D642
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Michigan molecular interactions r2: from interacting proteins to pathwaysTarcea, V. G. / Weymouth, T. / Ade, A. / Bookvich, A. / Gao, J. / Mahavisno, V. / Wright, Z. / Chapman, A. / Jayapandian, M. / zgü et al. | 2009
- D647
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PIG—the pathogen interaction gatewayDriscoll, T. / Dyer, M. D. / Murali, T. M. / Sobral, B. W. et al. | 2009
- D651
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PIPs: human protein–protein interaction prediction databaseMcDowall, M. D. / Scott, M. S. / Barton, G. J. et al. | 2009
- D657
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UniHI 4: new tools for query, analysis and visualization of the human protein–protein interactomeChaurasia, G. / Malhotra, S. / Russ, J. / Schnoegl, S. / Hä / nig, C. / Wanker, E. E. / Futschik, M. E. et al. | 2009
- D661
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VirHostNet: a knowledge base for the management and the analysis of proteome-wide virus–host interaction networksNavratil, V. / de Chassey, B. x. / Meyniel, L. x. / Delmotte, S. x. / Gautier, C. / André / P. / Lotteau, V. / Rabourdin-Combe, C. et al. | 2009
- D669
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VirusMINT: a viral protein interaction databaseChatr-aryamontri, A. / Ceol, A. / Peluso, D. / Nardozza, A. / Panni, S. / Sacco, F. / Tinti, M. / Smolyar, A. / Castagnoli, L. / Vidal, M. et al. | 2009
- D674
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PID: the Pathway Interaction DatabaseSchaefer, C. F. / Anthony, K. / Krupa, S. / Buchoff, J. / Day, M. / Hannay, T. / Buetow, K. H. et al. | 2009
- D680
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IUPHAR-DB: the IUPHAR database of G protein-coupled receptors and ion channelsHarmar, A. J. / Hills, R. A. / Rosser, E. M. / Jones, M. / Buneman, O. P. / Dunbar, D. R. / Greenhill, S. D. / Hale, V. A. / Sharman, J. L. / Bonner, T. I. et al. | 2009
- D686
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CleanEST: a database of cleansed EST librariesLee, B. / Shin, G. et al. | 2009
- D690
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Ensembl 2009Hubbard, T. J. / Aken, B. L. / Ayling, S. / Ballester, B. / Beal, K. / Bragin, E. / Brent, S. / Chen, Y. / Clapham, P. / Clarke, L. et al. | 2009
- D698
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EVOG: a database for evolutionary analysis of overlapping genesKim, D. S. / Cho, C. Y. / Huh, J. W. / Kim, H. S. / Cho, H. G. et al. | 2009
- D703
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ExDom: an integrated database for comparative analysis of the exon–intron structures of protein domains in eukaryotesBhasi, A. / Philip, P. / Manikandan, V. / Senapathy, P. et al. | 2009
- D712
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The Mouse Genome Database genotypes::phenotypesBlake, J. A. / Bult, C. J. / Eppig, J. T. / Kadin, J. A. / Richardson, J. E. et al. | 2009
- D720
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Mouse Phenome DatabaseGrubb, S. C. / Maddatu, T. P. / Bult, C. J. / Bogue, M. A. et al. | 2009
- D731
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PhyloPat: an updated version of the phylogenetic pattern database contains gene neighborhoodHulsen, T. / Groenen, P. M. / de Vlieg, J. / Alkema, W. et al. | 2009
- D738
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Pseudofam: the pseudogene families databaseLam, H. Y. / Khurana, E. / Fang, G. / Cayting, P. / Carriero, N. / Cheung, K. H. / Gerstein, M. B. et al. | 2009
- D744
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The Rat Genome Database 2009: variation, ontologies and pathwaysDwinell, M. R. / Worthey, E. A. / Shimoyama, M. / Bakir-Gungor, B. / DePons, J. / Laulederkind, S. / Lowry, T. / Nigram, R. / Petri, V. / Smith, J. et al. | 2009
- D750
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SpBase: the sea urchin genome database and web siteCameron, R. A. / Samanta, M. / Yuan, A. / He, D. / Davidson, E. et al. | 2009
- D755
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The UCSC Genome Browser Database: update 2009Kuhn, R. M. / Karolchik, D. / Zweig, A. S. / Wang, T. / Smith, K. E. / Rosenbloom, K. R. / Rhead, B. / Raney, B. J. / Pohl, A. / Pheasant, M. et al. | 2009
- D762
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Human Gene and Protein Database (HGPD): a novel database presenting a large quantity of experiment-based results in human proteomicsMaruyama, Y. / Wakamatsu, A. / Kawamura, Y. / Kimura, K. / Yamamoto, J. i. / Nishikawa, T. / Kisu, Y. / Sugano, S. / Goshima, N. / Isogai, T. et al. | 2009
- D767
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Human Protein Reference Database—2009 updateKeshava Prasad, T. S. / Goel, R. / Kandasamy, K. / Keerthikumar, S. / Kumar, S. / Mathivanan, S. / Telikicherla, D. / Raju, R. / Shafreen, B. / Venugopal, A. et al. | 2009
- D773
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Human Proteinpedia: a unified discovery resource for proteomics researchKandasamy, K. / Keerthikumar, S. / Goel, R. / Mathivanan, S. / Patankar, N. / Shafreen, B. / Renuse, S. / Pawar, H. / Ramachandra, Y. L. / Acharya, P. K. et al. | 2009
- D782
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BodyParts3D: 3D structure database for anatomical conceptsMitsuhashi, N. / Fujieda, K. / Tamura, T. / Kawamoto, S. / Takagi, T. / Okubo, K. et al. | 2009
- D786
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Comparative Toxicogenomics Database: a knowledgebase and discovery tool for chemical–gene–disease networksDavis, A. P. / Murphy, C. G. / Saraceni-Richards, C. A. / Rosenstein, M. C. / Wiegers, T. C. / Mattingly, C. J. et al. | 2009
- D793
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McKusick's Online Mendelian Inheritance in Man (OMIM®)Amberger, J. / Bocchini, C. A. / Scott, A. F. / Hamosh, A. et al. | 2009
- D797
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HGVbaseG2P: a central genetic association databaseThorisson, G. A. / Lancaster, O. / Free, R. C. / Hastings, R. K. / Sarmah, P. / Dash, D. / Brahmachari, S. K. / Brookes, A. J. et al. | 2009
- D803
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SNPLogic: an interactive single nucleotide polymorphism selection, annotation, and prioritization systemPico, A. R. / Smirnov, I. V. / Chang, J. S. / Yeh, R. F. / Wiemels, J. L. / Wiencke, J. K. / Tihan, T. / Conklin, B. R. / Wrensch, M. et al. | 2009
- D810
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VarySysDB: a human genetic polymorphism database based on all H-InvDB transcriptsShimada, M. K. / Matsumoto, R. / Hayakawa, Y. / Sanbonmatsu, R. / Gough, C. / Yamaguchi-Kabata, Y. / Yamasaki, C. / Imanishi, T. / Gojobori, T. et al. | 2009
- D816
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CTdatabase: a knowledge-base of high-throughput and curated data on cancer-testis antigensAlmeida, L. G. / Sakabe, N. J. / deOliveira, A. R. / Silva, M. C. / Mundstein, A. S. / Cohen, T. / Chen, Y. T. / Chua, R. / Gurung, S. / Gnjatic, S. et al. | 2009
- D820
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Database for exploration of functional context of genes implicated in ovarian cancerKaur, M. / Radovanovic, A. / Essack, M. / Schaefer, U. / Maqungo, M. / Kibler, T. / Schmeier, S. / Christoffels, A. / Narasimhan, K. / Choolani, M. et al. | 2009
- D824
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MoKCa database—mutations of kinases in cancerRichardson, C. J. / Gao, Q. / Mitsopoulous, C. / Zvelebil, M. / Pearl, L. H. / Pearl, F. M. et al. | 2009
- D832
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AutDB: a gene reference resource for autism researchBasu, S. N. / Kollu, R. / Banerjee-Basu, S. et al. | 2009
- D837
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DNAReplication: a database of information and resources for the eukaryotic DNA replication communityCotterill, S. / Kearsey, S. E. et al. | 2009
- D840
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ERGR: An ethanol-related gene resourceGuo, A. Y. / Webb, B. T. / Miles, M. F. / Zimmerman, M. P. / Kendler, K. S. / Zhao, Z. et al. | 2009
- D846
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G2Cdb: the Genes to Cognition databaseCroning, M. D. / Marshall, M. C. / McLaren, P. / Armstrong, J. D. / Grant, S. G. et al. | 2009
- D852
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INTERFEROME: the database of interferon regulated genesSamarajiwa, S. A. / Forster, S. / Auchettl, K. / Hertzog, P. J. et al. | 2009
- D858
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MDPD: an integrated genetic information resource for Parkinson's diseaseTang, S. / Zhang, Z. / Kavitha, G. / Tan, E. K. / Ng, S. K. et al. | 2009
- D863
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RAPID: Resource of Asian Primary Immunodeficiency DiseasesKeerthikumar, S. / Raju, R. / Kandasamy, K. / Hijikata, A. / Ramabadran, S. / Balakrishnan, L. / Ahmed, M. / Rani, S. / Selvan, L. D. / Somanathan, D. S. et al. | 2009
- D868
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ArrayExpress update—from an archive of functional genomics experiments to the atlas of gene expressionParkinson, H. / Kapushesky, M. / Kolesnikov, N. / Rustici, G. / Shojatalab, M. / Abeygunawardena, N. / Berube, H. / Dylag, M. / Emam, I. / Farne, A. et al. | 2009
- D873
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BloodExpress: a database of gene expression in mouse haematopoiesisMiranda-Saavedra, D. / De, S. / Trotter, M. W. / Teichmann, S. A. / Gö / ttgens, B. et al. | 2009
- D880
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CleanEx: new data extraction and merging tools based on MeSH term annotationPraz, V. / Bucher, P. et al. | 2009
- D885
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NCBI GEO: archive for high-throughput functional genomic dataBarrett, T. / Troup, D. B. / Wilhite, S. E. / Ledoux, P. / Rudnev, D. / Evangelista, C. / Kim, I. F. / Soboleva, A. / Tomashevsky, M. / Marshall, K. A. et al. | 2009
- D891
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GermSAGE: a comprehensive SAGE database for transcript discovery on male germ cell developmentLee, T. L. / Cheung, H. H. / Claus, J. / Sastry, C. / Singh, S. / Vu, L. / Rennert, O. / Chan, W. Y. et al. | 2009
- D898
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Implementation of GenePattern within the Stanford Microarray DatabaseHubble, J. / Demeter, J. / Jin, H. / Mao, M. / Nitzberg, M. / Reddy, T. B. / Wymore, F. / Zachariah, Z. K. / Sherlock, G. / Ball, C. A. et al. | 2009
- D902
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MAPU 2.0: high-accuracy proteomes mapped to genomesGnad, F. / Oroshi, M. / Birney, E. / Mann, M. et al. | 2009
- D907
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Sys-BodyFluid: a systematical database for human body fluid proteome researchLi, S. J. / Peng, M. / Li, H. / Liu, B. S. / Wang, C. / Wu, J. R. / Li, Y. X. / Zeng, R. et al. | 2009
- D913
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SysPIMP: the web-based systematical platform for identifying human disease-related mutated sequences from mass spectrometryXi, H. / Park, J. / Ding, G. / Lee, Y. H. / Li, Y. et al. | 2009
- D921
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Déjà vu: a database of highly similar citations in the scientific literatureErrami, M. / Sun, Z. / Long, T. C. / George, A. C. / Garner, H. R. et al. | 2009
- D925
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Cell Line Data Base: structure and recent improvements towards molecular authentication of human cell linesRomano, P. / Manniello, A. / Aresu, O. / Armento, M. / Cesaro, M. / Parodi, B. et al. | 2009
- D933
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APD2: the updated antimicrobial peptide database and its application in peptide designWang, G. / Li, X. / Wang, Z. et al. | 2009
- D938
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OligoArrayDb: pangenomic oligonucleotide microarray probe sets databaseRouillard, J. M. / Gulari, E. et al. | 2009
- D942
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RTPrimerDB: the portal for real-time PCR primers and probesLefever, S. / Vandesompele, J. / Speleman, F. / Pattyn, F. et al. | 2009
- D946
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GOBASE: an organelle genome databaseO’ / Brien, E. A. / Zhang, Y. / Wang, E. / Marie, V. / Badejoko, W. / Lang, B. F. / Burger, G. et al. | 2009
- D951
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AutoSNPdb: an annotated single nucleotide polymorphism database for crop plantsDuran, C. / Appleby, N. / Clark, T. / Wood, D. / Imelfort, M. / Batley, J. / Edwards, D. et al. | 2009
- D954
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GabiPD: the GABI primary database—a plant integrative ‘omics’ databaseRiañ / o-Pachó / n, D. M. / Nagel, A. / Neigenfind, J. / Wagner, R. / Basekow, R. / Weber, E. / Mueller-Roeber, B. / Diehl, S. et al. | 2009
- D960
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P3DB: a plant protein phosphorylation databaseGao, J. / Agrawal, G. K. / Thelen, J. J. / Xu, D. et al. | 2009
- D963
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PhytAMP: a database dedicated to antimicrobial plant peptidesHammami, R. / Ben Hamida, J. / Vergoten, G. x. / Fliss, I. et al. | 2009
- D969
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PPDB, the Plant Proteomics Database at CornellSun, Q. / Zybailov, B. / Majeran, W. / Friso, G. / Olinares, P. D. / van Wijk, K. J. et al. | 2009
- D975
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Arabidopsis Hormone Database: a comprehensive genetic and phenotypic information database for plant hormone research in ArabidopsisPeng, Z. y. / Zhou, X. / Li, L. / Yu, X. / Li, H. / Jiang, Z. / Cao, G. / Bai, M. / Wang, X. / Jiang, C. et al. | 2009
- D983
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AthaMap, integrating transcriptional and post-transcriptional dataBü / low, L. / Engelmann, S. / Schindler, M. / Hehl, R. et al. | 2009
- D987
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ATTED-II provides coexpressed gene networks for ArabidopsisObayashi, T. / Hayashi, S. / Saeki, M. / Ohta, H. / Kinoshita, K. et al. | 2009
- D992
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OryGenesDB 2008 update: database interoperability for functional genomics of riceDroc, G. x. / Pé / rin, C. / Fromentin, S. x. / Larmande, P. et al. | 2009
- D996
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RiceGeneThresher: a web-based application for mining genes underlying QTL in rice genomeThongjuea, S. / Ruanjaichon, V. / Bruskiewich, R. / Vanavichit, A. et al. | 2009
- D1001
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Update of the Diatom EST Database: a new tool for digital transcriptomicsMaheswari, U. / Mock, T. / Armbrust, E. V. / Bowler, C. et al. | 2009
- D1006
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IMGT, the international ImMunoGeneTics information systemLefranc, M. P. / Giudicelli, V. / Ginestoux, C. / Jabado-Michaloud, J. / Folch, G. / Bellahcene, F. / Wu, Y. / Gemrot, E. / Brochet, X. / Lane, J. et al. | 2009
- D1013
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The IMGT/HLA databaseRobinson, J. / Waller, M. J. / Fail, S. C. / McWilliam, H. / Lopez, R. / Parham, P. / Marsh, S. G. et al. | 2009
- D1018
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The HuRef Browser: a web resource for individual human genomicsAxelrod, N. / Lin, Y. / Ng, P. C. / Stockwell, T. B. / Crabtree, J. / Huang, J. / Kirkness, E. / Strausberg, R. L. / Frazier, M. E. / Venter, J. C. et al. | 2009
- D1025
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The YH database: the first Asian diploid genome databaseLi, G. / Ma, L. / Song, C. / Yang, Z. / Wang, X. / Huang, H. / Li, Y. / Li, R. / Zhang, X. / Yang, H. et al. | 2009
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