I‐TASSER: Fully automated protein structure prediction in CASP8 (Englisch)
- Neue Suche nach: Zhang, Yang
- Neue Suche nach: Zhang, Yang
In:
Proteins: Structure, Function, and Bioinformatics
;
77
, S9
;
100-113
;
2009
- Aufsatz (Zeitschrift) / Elektronische Ressource
-
Titel:I‐TASSER: Fully automated protein structure prediction in CASP8
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Beteiligte:Zhang, Yang ( Autor:in )
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Erschienen in:Proteins: Structure, Function, and Bioinformatics ; 77, S9 ; 100-113
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Verlag:
- Neue Suche nach: Wiley Subscription Services, Inc., A Wiley Company
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Erscheinungsdatum:01.01.2009
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Format / Umfang:14 pages
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ISSN:
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DOI:
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Medientyp:Aufsatz (Zeitschrift)
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Format:Elektronische Ressource
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Sprache:Englisch
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Schlagwörter:
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Datenquelle:
Inhaltsverzeichnis – Band 77, Ausgabe S9
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- 1
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Critical assessment of methods of protein structure prediction—Round VIIIMoult, John / Fidelis, Krzysztof / Kryshtafovych, Andriy / Rost, Burkhard / Tramontano, Anna et al. | 2009
- 5
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Protein structure prediction center in CASP8Kryshtafovych, Andriy / Krysko, Oleh / Daniluk, Pawel / Dmytriv, Zinovii / Fidelis, Krzysztof et al. | 2009
- 10
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Target domain definition and classification in CASP8Tress, Michael L. / Ezkurdia, Iakes / Richardson, Jane S. et al. | 2009
- 18
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Evaluation of template‐based models in CASP8 with standard measuresCozzetto, Domenico / Kryshtafovych, Andriy / Fidelis, Krzysztof / Moult, John / Rost, Burkhard / Tramontano, Anna et al. | 2009
- 29
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The other 90% of the protein: Assessment beyond the Cαs for CASP8 template‐based and high‐accuracy modelsKeedy, Daniel A. / Williams, Christopher J. / Headd, Jeffrey J. / Arendall, W. Bryan III / Chen, Vincent B. / Kapral, Gary J. / Gillespie, Robert A. / Block, Jeremy N. / Zemla, Adam / Richardson, David C. et al. | 2009
- 50
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Assessment of CASP8 structure predictions for template free targetsBen‐David, Moshe / Noivirt‐Brik, Orly / Paz, Aviv / Prilusky, Jaime / Sussman, Joel L. / Levy, Yaakov et al. | 2009
- 66
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Assessment of the protein‐structure refinement category in CASP8MacCallum, Justin L. / Hua, Lan / Schnieders, Michael J. / Pande, Vijay S. / Jacobson, Matthew P. / Dill, Ken A. et al. | 2009
- 81
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The use of automatic tools and human expertise in template‐based modeling of CASP8 target proteinsVenclovas, Česlovas / Margelevičius, Mindaugas et al. | 2009
- 89
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Structure prediction for CASP8 with all‐atom refinement using RosettaRaman, Srivatsan / Vernon, Robert / Thompson, James / Tyka, Michael / Sadreyev, Ruslan / Pei, Jimin / Kim, David / Kellogg, Elizabeth / DiMaio, Frank / Lange, Oliver et al. | 2009
- 100
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I‐TASSER: Fully automated protein structure prediction in CASP8Zhang, Yang et al. | 2009
- 114
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Improving physical realism, stereochemistry, and side‐chain accuracy in homology modeling: Four approaches that performed well in CASP8Krieger, Elmar / Joo, Keehyoung / Lee, Jinwoo / Lee, Jooyoung / Raman, Srivatsan / Thompson, James / Tyka, Mike / Baker, David / Karplus, Kevin et al. | 2009
- 123
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Performance of the Pro‐sp3‐TASSER server in CASP8Zhou, Hongyi / Pandit, Shashi B. / Skolnick, Jeffrey et al. | 2009
- 128
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Fast and accurate automatic structure prediction with HHpredHildebrand, Andrea / Remmert, Michael / Biegert, Andreas / Söding, Johannes et al. | 2009
- 133
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Template‐based and free modeling by RAPTOR++ in CASP8Xu, Jinbo / Peng, Jian / Zhao, Feng et al. | 2009
- 138
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Assessment of ligand binding residue predictions in CASP8López, Gonzalo / Ezkurdia, Iakes / Tress, Michael L. et al. | 2009
- 147
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Prediction of ligand binding sites using homologous structures and conservation at CASP8Wass, Mark N. / Sternberg, Michael J. E. et al. | 2009
- 152
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Protein‐binding site prediction based on three‐dimensional protein modelingOh, Mina / Joo, Keehyoung / Lee, Jooyoung et al. | 2009
- 157
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Evaluation of CASP8 model quality predictionsCozzetto, Domenico / Kryshtafovych, Andriy / Tramontano, Anna et al. | 2009
- 167
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Assessment of global and local model quality in CASP8 using Pcons and ProQLarsson, Per / Skwark, Marcin J. / Wallner, Björn / Elofsson, Arne et al. | 2009
- 173
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Global and local model quality estimation at CASP8 using the scoring functions QMEAN and QMEANclustBenkert, Pascal / Tosatto, Silvio C. E. / Schwede, Torsten et al. | 2009
- 181
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Prediction of global and local quality of CASP8 models by MULTICOM seriesCheng, Jianlin / Wang, Zheng / Tegge, Allison N. / Eickholt, Jesse et al. | 2009
- 185
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Prediction of global and local model quality in CASP8 using the ModFOLD serverMcGuffin, Liam J. et al. | 2009
- 191
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Applying Undertaker to quality assessmentArchie, John G. / Paluszewski, Martin / Karplus, Kevin et al. | 2009
- 196
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Assessment of domain boundary predictions and the prediction of intramolecular contacts in CASP8Ezkurdia, Iakes / Graña, Osvaldo / Izarzugaza, José M. G. / Tress, Michael L. et al. | 2009
- 210
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Assessment of disorder predictions in CASP8Noivirt‐Brik, Orly / Prilusky, Jaime / Sussman, Joel L. et al. | 2009
- 217
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CASP8 results in context of previous experimentsKryshtafovych, Andriy / Fidelis, Krzysztof / Moult, John et al. | 2009