NetDS: a Cytoscape plugin to analyze the robustness of dynamics and feedforward/feedback loop structures of biological networks (English)
- New search for: Le, D. H.
- New search for: Kwon, Y. K.
- New search for: Le, D. H.
- New search for: Kwon, Y. K.
In:
BIOINFORMATICS -OXFORD-
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27
, 19
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2767-2768
;
2011
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ISSN:
- Article (Journal) / Print
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Title:NetDS: a Cytoscape plugin to analyze the robustness of dynamics and feedforward/feedback loop structures of biological networks
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Contributors:Le, D. H. ( author ) / Kwon, Y. K. ( author )
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Published in:BIOINFORMATICS -OXFORD- ; 27, 19 ; 2767-2768
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Publisher:
- New search for: Oxford University Press
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Publication date:2011-01-01
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Size:2 pages
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ISSN:
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Type of media:Article (Journal)
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Type of material:Print
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Language:English
- New search for: 570
- Further information on Dewey Decimal Classification
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Classification:
DDC: 570 -
Source:
© Metadata Copyright the British Library Board and other contributors. All rights reserved.
Table of contents – Volume 27, Issue 19
The tables of contents are generated automatically and are based on the data records of the individual contributions available in the index of the TIB portal. The display of the Tables of Contents may therefore be incomplete.
- 2621
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A deeper look into transcription regulatory code by preferred pair distance templates for transcription factor binding sitesKulakovskiy, I. V. / Belostotsky, A. A. / Kasianov, A. S. / Esipova, N. G. / Medvedeva, Y. A. / Eliseeva, I. A. / Makeev, V. J. et al. | 2011
- 2625
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coMOTIF: a mixture framework for identifying transcription factor and a coregulator motif in ChIP-seq DataXu, Mengyuan / Weinberg, Clarice R. / Umbach, David M. / Li, Leping et al. | 2011
- 2633
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FDM: a graph-based statistical method to detect differential transcription using RNA-seq dataSingh, Darshan / Orellana, Christian F. / Hu, Yin / Jones, Corbin D. / Liu, Yufeng / Chiang, Derek Y. / Liu, Jinze / Prins, Jan F. et al. | 2011
- 2641
-
Tree-structured algorithm for long weak motif discoverySun, He Quan / Low, Malcolm Yoke Hean / Hsu, Wen Jing / Tan, Ching Wai / Rajapakse, Jagath C. et al. | 2011
- 2648
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Exome sequencing-based copy-number variation and loss of heterozygosity detection: ExomeCNVSathirapongsasuti, Jarupon Fah / Lee, Hane / Horst, Basil A. J. / Brunner, Georg / Cochran, Alistair J. / Binder, Scott / Quackenbush, John / Nelson, Stanley F. et al. | 2011
- 2655
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A phylogenetic mixture model for the identification of functionally divergent protein residuesGaston, Daniel / Susko, Edward / Roger, Andrew J. et al. | 2011
- 2664
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Reconstructing the architecture of the ancestral amniote genomeOuangraoua, Aïda / Tannier, Eric / Chauve, Cedric et al. | 2011
- 2672
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A powerful and flexible approach to the analysis of RNA sequence count dataZhou, Yi-Hui / Xia, Kai / Wright, Fred A. et al. | 2011
- 2679
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Penalized regression elucidates aberration hotspots mediating subtype-specific transcriptional responses in breast cancerYuan, Yinyin / Rueda, Oscar M. / Curtis, Christina / Markowetz, Florian et al. | 2011
- 2686
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Large-scale dynamic gene regulatory network inference combining differential equation models with local dynamic Bayesian network analysisLi, Zheng / Li, Ping / Krishnan, Arun / Liu, Jingdong et al. | 2011
- 2692
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Inferring disease and gene set associations with rank coherence in networksHwang, TaeHyun / Zhang, Wei / Xie, Maoqiang / Liu, Jinfeng / Kuang, Rui et al. | 2011
- 2700
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Robust synthetic gene network design via library-based search methodWu, Chih-Hung / Lee, Hsiao-Ching / Chen, Bor-Sen et al. | 2011
- 2707
-
Contextual analysis of RNAi-based functional screens using interaction networksGonzalez, Orland / Zimmer, Ralf et al. | 2011
- 2714
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Automatic detection of changes in the dynamics of delayed stochastic gene networks and in vivo production of RNA molecules in Escherichia coliMäkelä, Jarno / Huttunen, Heikki / Kandhavelu, Meenakshisundaram / Yli-Harja, Olli / Ribeiro, Andre S. et al. | 2011
- 2721
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OrganismTagger: detection, normalization and grounding of organism entities in biomedical documentsNaderi, Nona / Kappler, Thomas / Baker, Christopher J. O. / Witte, René et al. | 2011
- 2730
-
Automatic extraction of angiogenesis bioprocess from textWang, Xinglong / McKendrick, Iain / Barrett, Ian / Dix, Ian / French, Tim / Tsujii, Jun'ichi / Ananiadou, Sophia et al. | 2011
- 2738
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A biclustering algorithm for extracting bit-patterns from binary datasetsRodriguez-Baena, Domingo S. / Perez-Pulido, Antonio J. / Aguilar–Ruiz, Jesus S. et al. | 2011
- 2746
-
A framework for analytical characterization of monoclonal antibodies based on reactivity profiles in different tissuesRossin, Elizabeth / Lin, Tsung-I / Ho, Hsiu J. / Mentzer, Steven J. / Pyne, Saumyadipta et al. | 2011
- 2754
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Gee Fu: a sequence version and web-services database tool for genomic assembly, genome feature and NGS dataRamirez-Gonzalez, Ricardo / Caccamo, Mario / MacLean, Daniel et al. | 2011
- 2756
-
Mauve Assembly MetricsDarling, Aaron E. / Tritt, Andrew / Eisen, Jonathan A. / Facciotti, Marc T. et al. | 2011
- 2758
-
ReplacementMatrix: a web server for maximum-likelihood estimation of amino acid replacement rate matricesDang, Cuong Cao / Lefort, Vincent / Le, Vinh Sy / Le, Quang Si / Gascuel, Olivier et al. | 2011
- 2761
-
JMassBalance: mass-balanced randomization and analysis of metabolic networksBasler, Georg / Nikoloski, Zoran et al. | 2011
- 2763
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METANNOGEN: annotation of biological reaction networksGille, Christoph / Hübner, Katrin / Hoppe, Andreas / Holzhütter, Hermann–Georg et al. | 2011
- 2765
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GlobalMIT: learning globally optimal dynamic bayesian network with the mutual information test criterionVinh, Nguyen Xuan / Chetty, Madhu / Coppel, Ross / Wangikar, Pramod P. et al. | 2011
- 2767
-
NetDS: a Cytoscape plugin to analyze the robustness of dynamics and feedforward/feedback loop structures of biological networksLe, Duc-Hau / Kwon, Yung-Keun et al. | 2011
- 2769
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The GNAT library for local and remote gene mention normalizationHakenberg, Jörg / Gerner, Martin / Haeussler, Maximilian / Solt, Illés / Plake, Conrad / Schroeder, Michael / Gonzalez, Graciela / Nenadic, Goran / Bergman, Casey M. et al. | 2011
- 2772
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NeuroPedia: neuropeptide database and spectral libraryKim, Yoona / Bark, Steven / Hook, Vivian / Bandeira, Nuno et al. | 2011