Extending Fragment Based Free Energy Calculations with Library Based Monte Carlo Simulation: Annealing in Interaction Space (English)
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Biophysical journal
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100
, 1
; 154a
;
2011
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ISSN:
- Article (Journal) / Print
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Title:Extending Fragment Based Free Energy Calculations with Library Based Monte Carlo Simulation: Annealing in Interaction Space
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Published in:Biophysical journal ; 100, 1 ; 154a
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- New search for: Biophysical Soc.
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Place of publication:Bethesda, Md.
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Publication date:2011
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Type of media:Article (Journal)
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Type of material:Print
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Language:English
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Table of contents – Volume 100, Issue 1
The tables of contents are generated automatically and are based on the data records of the individual contributions available in the index of the TIB portal. The display of the Tables of Contents may therefore be incomplete.
- 1
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Feed-Forward and Feed-Backward Amplification Model from Cochlear Cytoarchitecture: An Interspecies ComparisonYoon, Yong-Jin et al. | 2011
- 11
-
A Model of the Interaction between N-type and C-type Inactivation in Kv1.4 ChannelsBett, Glenna C.L. et al. | 2011
- 22
-
Protein Diffusion in the Periplasm of E. coli under Osmotic StressSochacki, Kem A. et al. | 2011
- 32
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Implications of Three-Step Swimming Patterns in Bacterial ChemotaxisAltindal, Tuba et al. | 2011
- 42
-
A Novel Mechanism of Modulation of 5-HT3A Receptors by HydrocortisoneCorradi, Jeremías et al. | 2011
- 52
-
Determination of the Na+/Glucose Cotransporter (SGLT1) Turnover Rate Using the Ion-Trap TechniqueLongpré, Jean-Philippe et al. | 2011
- 60
-
Mapping the Importance of Four Factors in Creating Monovalent Ion Selectivity in Biological MoleculesThomas, Michael et al. | 2011
- 70
-
Kinetics of K+ Occlusion by the Phosphoenzyme of the Na+,K+-ATPaseMyers, Sian L. et al. | 2011
- 80
-
Near-Critical Fluctuations and Cytoskeleton-Assisted Phase Separation Lead to Subdiffusion in Cell MembranesEhrig, Jens et al. | 2011
- 90
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Two Conserved Residues Are Important for Inducing Highly Ordered Membrane Domains by the Transmembrane Domain of Influenza HemagglutininGe, Mingtao et al. | 2011
- 98
-
Solid-State 2H NMR Shows Equivalence of Dehydration and Osmotic Pressures in Lipid Membrane DeformationMallikarjunaiah, K.J. et al. | 2011
- 108
-
Bacterial Lipopolysaccharide Promotes Destabilization of Lung Surfactant-Like FilmsCañadas, Olga et al. | 2011
- 117
-
Sequence-Specific Ultrasonic Cleavage of DNAGrokhovsky, Sergei L. et al. | 2011
- 126
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Roles of DNA Looping in Enhancer-Blocking ActivityTokuda, Naoko et al. | 2011
- 135
-
Efficient Light Harvesting in a Dark, Hot, Acidic Environment: The Structure and Function of PSI-LHCI from Galdieria sulphurariaThangaraj, Balakumar et al. | 2011
- 144
-
Allosteric Suppression of HIV-1 Reverse Transcriptase Structural Dynamics upon Inhibitor BindingSeckler, James M. et al. | 2011
- 154
-
Investigating the Refolding Pathway of Human Acidic Fibroblast Growth Factor (hFGF-1) from the Residual Structure(s) Obtained by Denatured-State Hydrogen/Deuterium ExchangeWang, Han-Min et al. | 2011
- 165
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Dissociation of Bimolecular αIIbβ3-Fibrinogen Complex under a Constant Tensile ForceLitvinov, Rustem I. et al. | 2011
- 165
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Dissociation of Bimolecular aIIbb3-Fibrinogen Complex under a Constant Tensile ForceLitvinov, R. I. / Barsegov, V. / Schissler, A. J. / Fisher, A. R. / Bennett, J. S. / Weisel, J. W. / Shuman, H. et al. | 2011
- 174
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Polymer-Based Catch-BondsChen, Hsieh et al. | 2011
- 183
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Stoichiometry and Affinity of the Human Serum Albumin-Alzheimers Ab Peptide InteractionsMilojevic, J. / Melacini, G. et al. | 2011
- 183
-
Stoichiometry and Affinity of the Human Serum Albumin-Alzheimer's Aβ Peptide InteractionsMilojevic, Julijana et al. | 2011
- 193
-
Structural and Mechanical Properties of TTR105-115 Amyloid Fibrils from Compression ExperimentsMeersman, Filip et al. | 2011
- 198
-
X-ray Diffraction from Membrane Protein NanocrystalsHunter, M.S. et al. | 2011
- 207
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Detection of Membrane Protein Two-Dimensional Crystals in Living CellsGualtieri, E.J. et al. | 2011
- 215
-
In Vivo NMR Metabolic Profiling of Fabrea salina Reveals Sequential Defense Mechanisms against Ultraviolet RadiationMarangoni, Roberto et al. | 2011
- 225
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Investigating Antibody Interactions with a Polar Liquid Using Terahertz Pulsed SpectroscopySun, Yiwen et al. | 2011
- 232
-
Second-Harmonic Generation Imaging of Membrane Potential with Retinal AnaloguesTheer, Patrick et al. | 2011
- 243
-
Antibody-Unfolding and Metastable-State Binding in Force Spectroscopy and Recognition ImagingKaur, Parminder et al. | 2011
- 251
-
Noninvasive Detection and Imaging of Molecular Markers in Live Cardiomyocytes Derived from Human Embryonic Stem CellsPascut, Flavius C. et al. | 2011
- 260
-
Excited-State Dynamics of Protochlorophyllide Revealed by Subpicosecond Infrared SpectroscopyColindres-Rojas, Miriam et al. | 2011
- 268
-
CorrectionPoh, Yeh-Chuin et al. | 2011
- L1
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Asymmetric GUVs Prepared by MbCD-Mediated Lipid Exchange: An FCS StudyChiantia, S. / Schwille, P. / Klymchenko, A. S. / London, E. et al. | 2011
-
Heterogeneous Immunosensors that Do not Require Protein ImmobilizationHeyduk, Ewa et al. | 2011
-
High Speed AFM Imaging of Glutamate Receptor ActivationRamanujan, Chandra et al. | 2011
-
Thermal, Chemical and Mechanical Stability of HPV L1 VLP Vaccines: A Multiscale All-Atom Simulation StudyJoshi, Harshad et al. | 2011
-
Double-Gap Omega-Currents in Shaker K-Channels used to Clarify the Activation Path of S4Greeff, Nikolaus G. et al. | 2011
-
Single Hemichannels Recorded in Lipid Bilayers and Artificial Gap Junction Formation with CellsKreir, Mohamed et al. | 2011
-
Transcriptional Suppression of Connexin 43 by Tbx18 Undermines Cell-Cell Electrical Coupling in Postnatal CardiomyocytesKapur, Nidhi et al. | 2011
-
Synthesis of 15 Amino Acid Gtp-Ase Binding Region of Tuberous Sclerosis 2 to Study its Interaction with the Ras Gtp-Ase RhebJohannesen, Sigrid L. et al. | 2011
-
Design of a Duet Expression Vector to Characterize Ligand-receptor InteractionsTingquist, Nicholas D. et al. | 2011
-
Mechanism for Selectivity-Inactivation Coupling in KcsA Potassium ChannelsMcCoy, Jason G. et al. | 2011
-
Calculating Conductance and Size of the Entrance to the Inner Cavity of BK Channels with Side-Chain Replacement and a Two-Resistor ModelGeng, Yanyan et al. | 2011
-
A Structural Based Design of a Novel Protein Affinity Tag for Purification of Recombinant ProteinsJayanthi, Srinivas et al. | 2011
-
Human ETHER-A-Go-Go-Related Gene (HERG) K+ Channel Inhibition by the Antidepressant ParoxetineHong, Hee-Kyung et al. | 2011
-
Plasticity in KCNQ1 Subcellular Distribution and Partnership with Different KCNE Subunits Contribute to Variations in IKs Channel Function in the HeartZankov, Dimitar P. et al. | 2011
-
Interaction of Diltiazem with an Intracellularly Accessible Binding Site on CaV1.2Beyl, Stanislav et al. | 2011
-
"Must Channels Open Before Inactivating?" ReduxFineberg, Jeffrey D. et al. | 2011
-
Sinoatrial Nodal (SAN) Cells from Center or Peripheral SAN Area are not Functionally DifferentYang, Dongmei et al. | 2011
-
Calcium-Dependent Operation of the Human BK Channel Gating Ring ApparatusYusifov, Taleh et al. | 2011
-
Voltage Sensor Deactivation Inhibits BK Channel Opening by Mg2+Chen, Ren-Shiang et al. | 2011
-
A New Poisson-Nernst-Planck Equation (PNP-FS-IF) for Charge Inversion Near WallsHyon, YunKyong et al. | 2011
-
Single Channel Measurements of N-Acetylneuraminic Acid-Inducible Channel (NANC) in E. coliGiri, Janhavi et al. | 2011
-
Blebbistatin Protects Rodent Myocytes from Death in Primary Culture via Inhibiting Na/Ca ExchangeGuan, Yinzheng et al. | 2011
-
N-Benzyl-P-Toluenesulfonamide (BTS) Traps the Myosin Head in a Conformation Associated with Strong Myosin Based Layer Lines and Weak, Rapidly Reversible Actin Binding even in the Absence of NucleotideKraft, Theresia et al. | 2011
-
A Reinvestigation of the Source of Compliance of Muscle Cross-BridgesReconditi, Massimo et al. | 2011
-
Nucleic Acid Stability in Glycine Betaine Solutions: Correlating Small Molecule Interactions with Nucleic Acid SurfacesSchwinefus, Jeffrey J. et al. | 2011
-
Sodium-Potassium ion Channel Selectivity can be Modeled by Thyrofluidic Channel GatingBarger, James P. et al. | 2011
-
Electrophysiological Analysis of Two Malignant Hyperthermia-Linked Mutations in the 1,4-Dihydropyridine Receptor α1S SubunitBannister, Roger A. et al. | 2011
-
Pathological RyR1 Mutations to Identify RyR1 Functional DomainsCacheux, Marine et al. | 2011
-
Tracking Bacterial Swimming Near a Solid or Air SurfaceNisimova, Liana et al. | 2011
-
Expression and Characterization of Full Length Nonmuscle Myosin IIsWang, Aibing et al. | 2011
-
Probing Single-Molecule Ion Channel Dynamics by Combined Patch-Clamp Single-Molecule Fret Imaging MicroscopyRajapaksha, Suneth et al. | 2011
-
Domain Structure of the Major Allergen Ovomucoid by Solution NMRStenzoski, Natalie E. et al. | 2011
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Lipid Trafficking in Neurons and Schwann CellsLove, James Matthew et al. | 2011
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Molecular Motors at the T Cell Immunological SynapseYu, Yan et al. | 2011
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Monte Carlo Simulations of Absolute Binding Free Energy of Targeted Nanocarriers to Cell SurfacesLiu, Jin et al. | 2011
-
Synergistic Folding and Binding of Two Intrinsically Disordered ProteinsGanguly, Debabani et al. | 2011
-
In Vivo Structure of the E. coli FtsZ-Ring Revealed by Photoactivated Localization Microscopy (PALM)Fu, Guo et al. | 2011
-
Unexpected Features of Polymer Partitioning from Semi-Dilute Mixtures Into Protein VoidsGurnev, Philip et al. | 2011
-
Prediction of Binding Sites on Intrinsically Disordered ProteinsGoodman, Russell C. et al. | 2011
-
Measurement of Platelet Activation with Anti-P-Selectin Coated Magnetic Microparticlesvan Zijp, Loes et al. | 2011
-
A Device to Measure Ligand- or Voltage-Gated Channels Simultanously in 384 WellsJiang, Xin et al. | 2011
-
Fluorinated Membrane Potential ProbesYan, Ping et al. | 2011
-
Zero-Mode Waveguides: A Powerful Tool for Single-Molecule Optical StudiesHuang, Zhuangxiong et al. | 2011
-
UV Laser Patterning of Various Polymers for Biocompatibility Control of Chondrocyte Adhesion and Differentiation GradeFahrner, Marc et al. | 2011
-
Dynamics of Red Blood Cells and Vesicles in Microchannels of Oscillating WidthFranke, Thomas et al. | 2011
-
Bioenergetics Explains the Structures of Membrane Lipids: Cholesterol, Plant Sterols, Unusual Fatty Acid Chains and PolyisoprenesHaines, Thomas H. et al. | 2011
-
In Vivo 2H-NMR Study of the Action of Antibacterial Agents on Escherichia Coli MembranesTardy-Laporte, Catherine et al. | 2011
-
Small-Angle Neutron Scattering Reveals Colicin N Inserts into Clefts on the Outside of the OmpF TrimerJohnson, Christopher L. et al. | 2011
-
Do Sphingolipids Control Viral Membrane Protein Activity?Sanderson, John M. et al. | 2011
-
Role of Phospholipid Head Groups in Silver Nanoparticles Interaction with MembranesParthasarathi, Ramakrishnan et al. | 2011
-
The Effects of Sustained Hydrostatic Pressure on Human Bladder Smooth Muscle Cells Grown on Polymer ScaffoldsAhvaz, Hana Hanaee et al. | 2011
-
Role of N-Myristoylation of Camp-Dependent Protein Kinase a in Recognition and Phosphorylation of Membrane-Bound SubstratesGaffarogullari, Ece C. et al. | 2011
-
Unraveling N-BAR Domain Initiated Membrane RemodelingLyman, Edward R. et al. | 2011
-
Organization and Dynamics of Cholesterol Crystalline Domains using EPR Spin-LabelingMainali, Laxman et al. | 2011
-
Relationships Between Bilayer Phase and Equilibration Rates of Patman and LaurdanFranchino, Hannabeth A. et al. | 2011
-
Amyloid Fiber Formation is a Special Colloidal PhenomenonXu, Shaohua et al. | 2011
-
Stretching Poly(A) to Investigate Elastic Behavior at Low Ionic StrengthKalafut, Bennett S. et al. | 2011
-
Depletion Effects Massively Change Chromatin Properties and Influence Genome FoldingDiesinger, Philipp M. et al. | 2011
-
Unzipping Single DNA Molecules to Study the Structure of the Yeast Centromeric NucleosomeLi, Ming et al. | 2011
-
Steady State Deflections Reveal New Bundle Dynamics of Hair CellsFredrickson, Lea et al. | 2011
-
Millisecond-Sub-Piconewton Force Steps Reveal the Kinetics of DNA OverstretchingBianco, Pasquale et al. | 2011
-
Overstretching DNA at 65 pN does Not Require Peeling from Free Ends or NicksPaik, Daniel H. et al. | 2011
-
Prediction of the Effect of Adaptation and Active HB Mechanics on Prestin-Based Amplification Using a Macroscopic Model of the CochleaMeaud, Julien et al. | 2011
-
Calcium Regulated Channels in the Tmem16 FamilyJan, Lily et al. | 2011
-
On Noise and Filtering in Adaptive Signaling NetworksTu, Yuhai et al. | 2011
-
Modelling Ion Channel Behaviour in ChondrocytesLewis, Rebecca et al. | 2011
-
Isoflurane Increases Mitochondrial Free Ca2+ by Enhancing Transport via the Ca2+ Uniporter Independent of ΔΨmAgarwal, Bhawana et al. | 2011
-
Functional and Molecular Characterization of Katp Channels in Fibroblasts from Normal and Infarcted HeartsBenamer, Najate et al. | 2011
-
Testing the PH Domain Sentry Glutamate Hypothesis: A New Molecular Mechanism of CarcinogenesisPilling, Carissa et al. | 2011
-
Essential Role of Store-Operated Calcium Entry in Urotensin-Ii Induced Vascular Smooth Muscle Cells ProliferationRodríguez-Moyano, María et al. | 2011
-
STIM1 Rearranges into an Extended Conformation upon Interaction with Orai1Muik, Martin et al. | 2011
-
Computational Investigation of the Mechanism Behind Sidearm-Mediated Neurofilament InteractionJayanthi, Lakshmi et al. | 2011
-
Towards Massively-Parallel Analytic Capabilities for Multielectrode RecordingsGardner, Daniel et al. | 2011
-
Resting-State Orai1 Diffuses as Homotetramer in the Plasma Membrane of Live Mammalian CellsMadl, Josef et al. | 2011
-
Optogenetic Stimulation Enhances Interleukin-1beta Levels in Cultured NeuronsSengupta, Parijat et al. | 2011
-
Calcium Imaging in Drosophila During Walking and Flight BehaviorSeelig, Johannes D. et al. | 2011
-
Probing Target Search Mechanisms of Transcription Factors in Human CellsNormanno, Davide et al. | 2011
-
Effect of Cytoskeleton on Cell Volume Regulation in Mdck CellsRahimzadeh, Jason et al. | 2011
-
PACAP-Evoked Adrenal Excitation is Due to Membrane Depolarization and Facilitation of an LVA Calcium ChannelTudor, Jacqueline Hill et al. | 2011
-
Pinpointing Calmodulin on Functioning KCNQ ChannelsMruk, Karen et al. | 2011
-
Analysis of the Functional Determinants of Cation Permeation Through TRPC3Poteser, Michael et al. | 2011
-
Half of IKso in Rat Cerebellar Granule Neurons is Held in Reserve by Sumo Suppression of Plasma Membrane Channels Containing K2P1Plant, Leigh D. et al. | 2011
-
Direct Activation of TRPV6 Channels by Phosphatidylinositol 4,5-BisphosphateZakharian, Eleonora et al. | 2011
-
Engineering Controllable Myosin Motors for Bidirectional TransportChen, Lu et al. | 2011
-
Kinetics of Smooth Muscle Acrylodan-Tropomyosin Transitions on ActinLutz, Evan et al. | 2011
-
Sub-Millisecond Time-Resolved 2-Dimensional X-Ray Diffraction Recording from Stretch-Activated Flight Muscle from BumblebeeIwamoto, Hiroyuki et al. | 2011
-
Reconstitution of Collective Transport by Defined Numbers of Kinesin-1 and Kinesin-14, Two Opposing Motor ProteinsFuruta, Ken'ya et al. | 2011
-
Neck-Linker-Length Dependence of Processive Kinesin-5 MotilityDüselder, André et al. | 2011
-
Inchworm-Like Stepping of Full Length Processive MyoVaArmstrong, Jessica M. et al. | 2011
-
How Varying the Processivity of Myosin V Affects its Motion in Cos-7 CellsLu, Hailong et al. | 2011
-
In Vivo Role of a Novel Kinesin-13 Microtubule Binding SiteAsenjo, Ana B. et al. | 2011
-
Quantification of Cross-Bridge Cycling between the Different Physicochemical Conformations by Optical MeansHarary, Tamar et al. | 2011
-
Processive Cargo Movement by Multiple Non-Processive Motors Bound to a Tetrameric Adapter ProteinKrementsova, Elena B. et al. | 2011
-
Deletion of 1- 43 Amino Acids from the N-terminus of Myosin Essential Light Chain in Transgenic Mice Decreases Force Production by Reducing the Number of Myosin Cross-BridgesMichael, John J. et al. | 2011
-
Functional Mutations in the Force Generation Region Destabilize the Relay Helix in MyosinAgafonov, Roman V. et al. | 2011
-
Development of Fluorescently Tagged BMP-2 analogAkkiraju, Hemanth et al. | 2011
-
Advances in Three Dimensional Super Resolution Fluorescence Localization MicroscopyMlodzianoski, Michael J. et al. | 2011
-
Sodium-Coupled Substrate Translocation Mechanism via the Sodium/Betaine SymporterMahinthichaichan, Paween et al. | 2011
-
Lipid Protein Interactions and Dynamical Properties of VDAC 1 channelBriones, Rodolfo et al. | 2011
-
Tracking Degradations of Single DNA and Protein Molecules in FluidOnoshima, Daisuke et al. | 2011
-
High-Throughput Single Molecule Measurements Confirm a Load-Dependent Association Rate for E-Selectin and Sialyl LewisaSnook, Jeremy H. et al. | 2011
-
The Structural, Dynamic, and Functional Changes in the KCNE1 Membrane Protein Between Detergent Micelles and Lipid BilayersCoey, Aaron T. et al. | 2011
-
In the Arms of EcoRI - probing the Binding Specificity of the Restriction Endonuclease Using Electron Spin ResonanceSarver, Jessica et al. | 2011
-
Single Molecule Myosin V Dynamics Using High Time Resolution Polarized TIRFBeausang, John F. et al. | 2011
-
Linear-Scaling Soft Core Scheme for Alchemical Free Energy CalculationsBuelens, Floris P. et al. | 2011
-
How do Sterols Determine the Antifungal Effect of Amphotericin B? free Energy of Binding Between the Drug and its Membrane TargetsNeumann, Anna et al. | 2011
-
A novel Brownian-Dynamics Algorithm for the Simulation of Ion Conduction Through Membrane PoresBerti, Claudio et al. | 2011
-
CHARMM-GUI: Brining Advanced Computational Techniques to Web InterfaceJo, Sunhwan et al. | 2011
-
Molecular Dynamics Simulation of Solid-Supported Lipid BilayersYeh, In-Chul et al. | 2011
-
Tracking Single Particles and Elongated Filaments with Nanometer PrecisionRuhnow, Felix et al. | 2011
-
Vibrational Modes and Absorption Spectra of Large Biomolecules in the Harmonic ApproximationThirumuruganandham, Saravana P. et al. | 2011
-
Single Molecule Study of Cis-Platin DNA InteractionDutta, Samrat et al. | 2011
-
Ultrathin Solid-State Nanopores as Biomolecular Discrimination ElementsWanunu, Meni et al. | 2011
-
Is Intracellular ph a Master Clock for the Events of Mitosis?Gagliardi, Lucian J. et al. | 2011
-
Transcription Activation via Transcriptional BurstingHensel, Zach et al. | 2011
-
The Photochemistry of Bacteriophytochrome: Key to its Use as a Deep-Tissue Fluorescence ProbeToh, K.C. et al. | 2011
-
Bcl-2 Family Proteins Regulate the Ability of Ceramide Channels to Permeabilize the Mitochondrial Outer Membrane to ProteinsColombini, Marco et al. | 2011
-
Structural Characterization of Torsional Destabilization in DNALionberger, Troy A. et al. | 2011
-
CRAC Channel Function Through ORAI1, STIM1 and STIM2 is Required for Proinflammatory Effector T Cell Function in AutoimmunityFeske, Stefan et al. | 2011
-
Fluorescence Imaging of Influenza Virus H1N1 mRNA in Living Infected Cells using Single Chromophore FIT-PNAKummer, Susann et al. | 2011
-
Quantitative TCSPC FRET-FLIM Applied to Donors Exhibiting Multi-Exponential Decays: Spatio-Temporal Interaction Between Calmodulin and the Kv7.2 Potassium Channel in Living CellsPadilla-Parra, Sergi et al. | 2011
-
Type III Restriction Enzymes Use 1D Diffusion to Communicate the Relative Orientation of their Distant Target SitesSchwarz, Friedrich W. et al. | 2011
-
The N-Terminal Disease Hot Spot of Ryanodine Receptors Forms a Cytoplasmic VestibuleVan Petegem, Filip et al. | 2011
-
Functional Expression and Subcellular Localization of f-Channels in Native Human and hESC-Derived CardiomyocytesSartiani, Laura et al. | 2011
-
Allostery and Folding Mechanisms of the N-Terminal Receiver Domain of Protein NTRCTripathi, Swarnendu et al. | 2011
-
Non-Esterified Fatty Acids (NEFAs) Generate Distinct Aβ42 Oligomers via Two Distinct Aggregation PathwaysKumar, Amit et al. | 2011
-
A general and Efficient All-Atom Simulation Method to Determine the Equilibrium Orientation of Transmembrane Proteins in MembranesKulleperuma, Kethika et al. | 2011
-
Multiscale Simulations of Lipid Interactions with Integral Membrane Proteins: AquaporinsStansfeld, Phillip J. et al. | 2011
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Comparative Neural Network and Alignment Study of AquaporinsBomholt, Julie et al. | 2011
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Stereochemistry and Protein Folding: Spectroscopic and Molecular Dynamics Studies of Homopolypeptides in DMSOSrivastava, Kinshuk R. et al. | 2011
-
Ion Pairs in the Hydrophobic Interior of a Protein: How Do Proteins Dissolve Salt in Oil?Robinson, Aaron et al. | 2011
-
Anomalies in the Vibrational Dynamics of Proteins are a Consequence of Fractal-Like StractureReuveni, Shlomi et al. | 2011
-
Loop Conformation Prediction through Saddle-Point Search Simulations using the Art Nouveau Method and OPEP Simplified PotentialSt-Pierre, Jean-Francois et al. | 2011
-
NMR Structure Determination by Conformational Space AnnealingLee, Jooyoung et al. | 2011
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Design and Analysis of De Novo Collagen-Like Heterotrimers using Charge Repulsion-Based Negative DesignJoshi, Mihir et al. | 2011
-
Interplay Between Ligand and Substrate Binding in Human Indoleamine 2,3-DioxygenaseYeh, Syun-Ru et al. | 2011
-
The 186 Bacteriophage Repressor as a Model System to Study Nucleosome Repositioning by Single Molecule MicroscopyWang, Haowei et al. | 2011
-
Biophysical Study of the G Quadruplex Formed by FMRP mRNA and of its Interactions with the FMRP RGG BoxBlice-Baum, Anna et al. | 2011
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Exploring the Folding Landscape of RNA in Crowded SolutionsKilburn, Duncan et al. | 2011
-
Structured Functional Domains of Myelin Basic Protein: Cross-Talk Between Actin Polymerization and Ca2+-Dependent Calmodulin InteractionBamm, Vladimir V. et al. | 2011
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Annealing Helicase HARP: A Single Molecule StudyDe Vlaminck, Iwijn et al. | 2011
-
Measuring the Dimensions of a Compact Kinetic Intermediate in the Folding Pathway of the GlmS RibozymeMeisburger, Steve et al. | 2011
-
Structure and Dynamics of “SWITCHING” RNAsDayie, T. Kwaku et al. | 2011
-
Exploring Wild-Type and Mutant E. coli Strains for the Synthesis of Site-Specific Labels to Study RNA Structure and Dynamics by NMRSama, Jacob N. et al. | 2011
-
Ligand Induced Conformational Changes of Riboswitches Probed by SAXS and NMR SpectroscopyChen, Bin et al. | 2011
-
Single-Molecule Studies of the Eukaryotic Replicative DNA Helicase MCM2-7Yardimci, Hasan et al. | 2011
-
A Microfluidic System for Electrophysiology in Artificial MembranesMartel, Anne et al. | 2011
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Proton Transport and Conformational Changes in H+/CL- ExchangersMalvezzi, Mattia et al. | 2011
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Fluorescence Correlation Spectroscopic Examination of Insulin and IGF1 Binding to Receptors on 2H3 Rat Basophilic Leukemia CellsWinter, Peter W. et al. | 2011
-
Monitoring Association of Membrane Proteins with Micro-Domains and Cytoskeleton in Live Cells During Signaling and PerturbationHuang, Heng et al. | 2011
-
Dynamics of the Outward and Inward Facing States of the Serotonin TransporterShaikh, Saher A. et al. | 2011
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Compartmentalized Membrane Proteins: MHC Class I as an Important ExampleGheber, Levi A. et al. | 2011
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Nuclear Export of mRNA in Living CellsGrünwald, David et al. | 2011
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Fluorescence Measurements of Integrin Cell Membrane Receptor Organization and Cellular Factors Altering Integrin ReorganizationSmith, Emily A. et al. | 2011
-
Structure & Mechanisms Underlying Heteromeric Glutamate Receptor AssemblyKumar, Janesh et al. | 2011
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Subunit Specific Impact of Lurcher Motif Residues on NMDA Receptor GatingMurthy, Swetha et al. | 2011
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A Hydrophobic Bundle Crossing Found in Glutamate Receptor and K+ channel Pore Helices Dominates the Conformational Free Energy LandscapeYonkunas, Michael J. et al. | 2011
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Structural Dynamics of a Signalosome: The Receptor-G protein ComplexHuber, Thomas et al. | 2011
-
Molecular Determinants of Ca2+ Binding in the Mthk K+ ChannelPau, Victor P.T. et al. | 2011
-
Single Molecule Fluorescence Imaging Reveals Monomeric Transforming Growth Factor-ΒETA ReceptorsZhang, Wei et al. | 2011
-
Potassium Channel Regulation of Thromboxane A2 Receptor FunctionDanesh, Shahab M. et al. | 2011
-
Polymer-Supported Membranes for Probing Transmembrane Protein Diffusion and Interaction by Single-Molecule TechniquesRoder, Friedrich et al. | 2011
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Allostery in an EnsembleHilser, Vincent J. et al. | 2011
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Regulation of Intercellular Regulation of Signaling via Gap JunctionChen, Yanyi et al. | 2011
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Deficiency in the Functional Activity of BK Channels Leads to Systemic, But Not Pulmonary, HypertensionZheng, Yun-Min et al. | 2011
-
Application of the Cytopatch Instrument for Compound Screening of Ligand-Gated ion ChannelsKnott, Thomas et al. | 2011
-
Yeast TRK Proteins Mediate Anion Conduction via Barrel-Stave PoresRivetta, Alberto et al. | 2011
-
Etomidate Binding Interactions in GABAA Receptor Defined with Cysteine SubstitutionsStewart, Deirdre S. et al. | 2011
-
The Hidden Energetics of Ligand-Binding and Activation in a Glutamate ReceptorLau, Albert Y. et al. | 2011
-
Membrane Induced Conformational Transitions in Alpha-Synuclein Aggregation and FunctionEliezer, David et al. | 2011
-
NMR Study of General Anesthetic Interactions with the Neuronal N-Acetylcholine Receptor Transmembrane DomainBondarenko, Vasyl et al. | 2011
-
Closed-State Inactivation of a Voltage-Gated Potassium Channel Involves Inter-Subunit InteractionsWollberg, Jessica et al. | 2011
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Identification of a KV4 Channel Hydrophobic Binding Pocket for the Inhibitory Effects of Polyunsaturated Fatty AcidsHeler, Robert et al. | 2011
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Transient NADH Responses to Cyanide Related to the Absorption Properties of Intact Cardiac TissueGhouri, Iffath A. et al. | 2011
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Temperature Dependence of the High-Pressure Denatured State of Lambda RepressorLiu, Yanxin et al. | 2011
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CVT Inhibits the Intralipid Rescue of Bupivacaine-Induced Cardiotoxicity in a Dose-Dependant MannerPartownavid, Parisa et al. | 2011
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Sex Differences in the Mechanical Properties of Rat Myocardium After Exposure to Simulated MicrogravityMitov, Mihail I. et al. | 2011
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Foxo1 Nuclear-Cytoplasmic Movement in Live Skeletal Muscle FiberSchachter, Tova Neustadt et al. | 2011
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Measurements of Power Output in Human MyocardiumShekar, Premi et al. | 2011
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The Differential Action of Cytocalasin D in T-tubular Remodelling of Ventricular MyocytesKaestner, Lars et al. | 2011
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Studying Protein DNA Binding with PELDORSchiemann, Olav et al. | 2011
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Probing F-actin Stability and Mechanics using Structure-Based Computational ModelingBransford, Philip et al. | 2011
-
Mechanism of Actin Nucleation by Arp2/3 Complex Visualized by Single Molecule FluorescenceSmith, Benjamin A. et al. | 2011
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Mechanical Characterization of Intracellular Structures using Fluorescently Labeled Substrates and 3D Image AnalysisAvalos, Paula Gonzalez et al. | 2011
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Multiresolution Molecular Dynamics Simulations of Crystalline NanofibrilsBellesia, Giovanni et al. | 2011
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Nonequilibrium Mechanics of the Mitotic Spindle Measured in Living CellsKilfoil, Maria et al. | 2011
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Regulation of Cell-Surface Adhesion During Amoeboid MigrationMcCann, Colin P. et al. | 2011
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Automated Real-Space Refinement of Protein Crystal Structures Using a Realistic Backbone Move SetHaddadian, Esmael J. et al. | 2011
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Drift-Oscillatory Steering with the Forward-Reverse Method for Calculating the Potential of Mean ForceHolland, Bryan W. et al. | 2011
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Effects of Mechanical Forces on the Cellular DynamicsPapi, Massimiliano et al. | 2011
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Low-Frequency Raman Spectroscopy of TrialanineStephenson, Rachel M. et al. | 2011
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Development of a Novel Algorithm for Identifying Transcription Factor Binding Motifs in the Genome DNA SequencesNakaki, Ryo et al. | 2011
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Photon Diffusion Attenuation Length in Tyrode and Blood-Perfused Myocardial TissueKanaporis, Giedrius et al. | 2011
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Single-Camera Multi-Parametric Optical Mapping During Local Excitation of Isolated Rat HeartLee, Peter et al. | 2011
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Fast Topology Changes During SNARE-Mediated Vesicle Fusion Observed in Supported Membranes by Polarized TirfmVolker, Kiessling et al. | 2011
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Effect of Octylglucoside on the Disk Phase of BicellesGarg, Daman et al. | 2011
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The Copolymer Surfactant P188 Reduces Tension in Permeabilized Cell MembranesOliveira, Juliana et al. | 2011
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Characterization of Lipid Asymmetry in Plasma Membrane-Derived VesiclesChen, Lirong et al. | 2011
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Multiple Actin Structures in Monomeric and Filamentous StatesMorimatsu, Masatoshi et al. | 2011
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First Step in Folding of Nonconstitutive Membrane Proteins: Spontaneous Insertion of a Polypeptide into a Lipid Bilayer and Formation of Helical StructureKarabadzhak, Alexander G. et al. | 2011
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A coarse-Grained Monte Carlo Model of Cytoskeletal Actin Filament Alignment under Cyclic StretchKang, John et al. | 2011
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Effect of Pressure on the Stability of Short DNA HairpinsMacgregor, Robert et al. | 2011
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Single-Molecule Counting with PalmRenz, Malte et al. | 2011
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Photon-By-Photon Analysis of Single Molecule Fluorescence Trajectories Determines an Upper Bound for the Transition Path Time in Protein FoldingChung, Hoi Sung et al. | 2011
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Calculation of pKa in Proteins with the MM_SCPShan, Jufang et al. | 2011
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Phospholipid Fatty Acid Structure and the Activity of Membrane-Active PeptidesPokorny, Antje et al. | 2011
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Lipid-Mediated Helix Gating in the GlpG Rhomboid Protease from Escherichia ColiWhite, Stephen H. et al. | 2011
-
Environmental Influences on the Conformational Dynamics of Tonb-Dependent Transporters: Molecular Dynamics Simulations of Complex Membrane ModelsPiggot, Thomas J. et al. | 2011
-
Architecture, Symmetry and Mechanism of Ionotropic Glutamate ReceptorsGouaux, Eric et al. | 2011
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Ionization Properties of Mixed Lipid Membranes: A Gouy-Chapman Model of the Electrostatic-Hydrogen Bond SwitchMengistu, Demmelash H. et al. | 2011
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3D Single Molecule Tracking in Thick Cellular Samples using Multifocal Plane MicroscopyRam, Sripad et al. | 2011
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Kinetic Analysis of Human α and β Cardiac Myosin Motor DomainsDeacon, John C. et al. | 2011
-
Pathway for Transmembrane Signaling in the Bacterial Ferric Citrate Transporter FecAMokdad, Audrey et al. | 2011
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Protein Kinase Cα Mediated Phosphorylation of Cardiac Troponin Reduces Maximal Force and Exerts Dual Effects on Ca2+-Sensitivity in Human CardiomyocytesKooij, Viola et al. | 2011
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Characterizing Order and Disorder of Protein Structural EnsemblesFisher, Charles K. et al. | 2011
-
Crystal Structures of the CusA Efflux Pump Suggest Methionine Mediated Metal TransportYu, Edward et al. | 2011
-
Multidomain Dynamics of a Fatty Acid β-Oxidation Multienzyme Complex Studied by Molecular Dynamics SimulationFuruta, Tadaomi et al. | 2011
-
Site-Directed EPR-Studies on the Effect of Bilayer Cholesterol Content on M2 Conformational EquilibriumSaotome, Kei et al. | 2011
-
Simulation Studies of the Outer Membrane Protein Chaperone SkpBond, Peter J. et al. | 2011
-
Gold Nanoparticle Coupled with Dynamic Light Scattering for Protein Complex Detection and AnalysisHuo, Qun et al. | 2011
-
A New Class of Lipidic Immunomodulators that Activate TLR-Dependent Cascades and Cytokine SecretionLonez, Caroline et al. | 2011
-
Local Protein Surface Patch Method for Protein-Ligand Binding PredictionSael, Lee et al. | 2011
-
Structural Basis for Amyloid β-Protein Toxicity Inhibition: A Multiscale Computational StudyUrbanc, Brigita et al. | 2011
-
Mapping the Lengths of DNA Inside Partially Ejected Bacteriophage λThomas, David G. et al. | 2011
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In Vitro Interactions Between Model Proteins and Amyloid InhibitorsHorvath, Istvan et al. | 2011
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The Conformational Change of SNAP25 during the ExocytosisZhao, Ying et al. | 2011
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Engineering of Acid Insensitive ProteinsBell-Upp, Peregrine et al. | 2011
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On-Chip Electroporation Results in Calcium- and Chloride- Stimulated Exocytosis Assayed with Planar Electrochemical MicroelectrodesGhosh, Jaya et al. | 2011
-
Functional Characterization of Putative Synaptotagmin-Binding Interfaces in SNAP-25Mohrmann, Ralf et al. | 2011
-
Coarse-Grained Simulations of Membrane Remodeling by Bar DomainsCui, Haosheng et al. | 2011
-
Optically Probing Heterogeneous Synaptic Activities in Hair CellsWong, Aaron B. et al. | 2011
-
Rapamycin is a Deceptive Tool for Probing Functional Interactions Between FK506-Binding Proteins and Ryanodine ReceptorsVenturi, Elisa et al. | 2011
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Structure Formation in the Cell's Secretory PathwayWeiss, Matthias et al. | 2011
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Slow Diffusion Across Cell Membrane Delays Onset of RyR2-Channel Block and Ca Wave Suppression by Flecainide in Intact MyocytesHwang, Hyun Seok et al. | 2011
-
Celecoxib Blocks Cardiac Kv1.5, Kv4.3 and Kv7.1 (KCNQ1) Channels. Effects on Cardiac Action PotentialsMacias, Alvaro et al. | 2011
-
Membrane Lipid Composition Regulates Tubulin-VDAC InteractionRostovtseva, Tatiana K. et al. | 2011
-
Real-Time Dynamics of Ca2+, Phosphatidylserine, Caspase-3/7, and Morphological Changes in Apoptosis: Retinal Ganglion Cells Under Elevated PressureLu, Siyuan et al. | 2011
-
Endplate Na+ Channels Loss Impairs Neuromuscular Transmission in Myasthenia GravisRuff, Robert Louis et al. | 2011
-
A Similar Motif Shared by HIV-1 gp41 and TCRA Trans-Membrane Domains Exploited by the HIV Virus to Modulate T-Cell ProliferationShai, Yechiel et al. | 2011
-
Gating Current of the KCNQ1 Voltage-Gated Potassium ChannelRuscic, Katarina J. et al. | 2011
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Histidine 562 on S5 is a pH Sensor for HERG GatingBett, Glenna C.L. et al. | 2011
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Pore Determinants of KCNQ3 K+ Current ExpressionChoveau, Frank et al. | 2011
-
Y1767C, a Novel SCN5A Mutation Induces a Persistent Sodium Current and Potentiates Ranolazine Inhibition of NaV1.5 ChannelsHuang, Hai et al. | 2011
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The Selective Nav1.8 Sodium Channel Blocker A-803467 Affects Electrical Activity in Intracardiac Neurons, but not in CardiomyocytesVeldkamp, Marieke W. et al. | 2011
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Gating Modulation of KCNQ2/3 via N-C termini InteractionEtzioni, Adi et al. | 2011
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Activation of Kir4.2 by Extracellular PotassiumEdvinsson, Johan M. et al. | 2011
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DIII - DIV Linker Charge Mutations Differentially Affect Open and Closed State Fast Inactivation in Nav1.4Groome, James R. et al. | 2011
-
Models of Human Atrial Action Potential for Sinus Rhythm and Chronic Atrial FibrillationGrandi, Eleonora et al. | 2011
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Revisiting the Ionic Mechanisms of Early Afterdepolarizations in Cardiomyocytes: Predominant by Ca Waves or Ca Currents?Zhao, Zhenghang et al. | 2011
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Mechanics and Biochemistry of Matrix Assembly: Pulling it all TogetherLemmon, Chris A. et al. | 2011
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Ischemic Boundary as a Source of Scroll Waves: A Three-Dimensional ViewBiktashev, Vadim et al. | 2011
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Molecular-Detailed Modeling of Red Blood Cells in Stokes FlowPeng, Zhangli et al. | 2011
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Increased Cardiac O-GlcNAc Transferase and O-Glcnacase Association to Actin, Tropomyosin and MLC 1 in Diabetes: A Mechanism for O-GlcNAc Mediated Myofilament Calcium DesensitizationRamirez-Correa, Genaro A. et al. | 2011
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N-Terminal Truncated Cardiac TnI Extends Frank-Starling Response of the HeartFeng, Hanzhong et al. | 2011
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N-Terminal Truncated Cardiac TnI Improves Cardiac Function In Vivo and Rescues Restrictive CardiomyopathyJean-Charles, Pierre-Yves et al. | 2011
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Dose-Dependent Arrhythmia and Cardiac Dysfunction in Restrictive Cardiomyopathy Mice Due to Troponin MutationsLi, Yuejin et al. | 2011
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The Motif of Myosin Binding Protein-C is Mechanically Weak and ExtensibleKarsai, Arpad et al. | 2011
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Homeostasis of Mitochondrial Calcium in Alcoholic Liver DiseasesWang, Guoqiang et al. | 2011
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Mobility in Amorphous Biomaterials: Microstructure, Temperature, and Interaction Among ComponentsLiang, Jun et al. | 2011
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Translocation of Biopolymers Through Protein Nanopores: Mechanistic Insights from MD SimulationsGuy, Andrew T. et al. | 2011
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Nanomechanics of Canonical Double Stranded DNA Structures Probed with Single-Molecule Force SpectroscopyRabbi, Mahir et al. | 2011
-
Single-Molecule Studies of the Parallel Unfolding Pathways of Maltose Binding Protein (MBP)Aggarwal, Vasudha et al. | 2011
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Influence of Quantum Dot Labels on Single Molecule Movement in the Plasma MembraneClausen, Mathias P. et al. | 2011
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Photocontrol of Myosin V ATPase Activity using Calmodulin Modified with Photochromic CompoundShishido, Hideki et al. | 2011
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Atomic-Resolution Three Dimensional Structures and Membrane Locations of Antimicrobial Piscidin 1 and Piscidin 3 in Aligned Lipid Bilayers: A Solid-State NMR and Molecular Dynamics InvestigationCotten, Myriam et al. | 2011
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Platelet Adhesion to Keratin Biomaterial Hydrogels under Physiologic Flow ConditionsSigley, Justin L. et al. | 2011
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The use of Light-Induced lo Domains in Giant Unilamellar Vesicles to Mimick raft Dynamics: Application to the Effect of the Ganglioside GM1Staneva, Galya et al. | 2011
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rBPI21 Causes (HEMI)Fusion and Leakage of Membranes and Promotes Massive Lipopolysaccharide AggregationDomingues, Marco et al. | 2011
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Data Compression for Molecular SimulationsKumar, Anand et al. | 2011
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Interaction of Biologically-Relevant Peptides with Membrane Model SystemsBasso, Luis G. Mansor et al. | 2011
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Fenamates Alter Bilayer PropertiesSanford, R. Lea et al. | 2011
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Exchange of Gramicidin between Lipid Bilayers: Implications for the Mechanism of Channel Formation and GatingLum, Kevin et al. | 2011
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Anomalous Diffusion of Water Molecules in Hydrated Lipid BilayersDas, Jhuma et al. | 2011
-
Oligonucleotide-Based Amphiphilic Block Copolymers Interacting with Cell Membrane Models at the Air-Water InterfaceCaseli, Luciano et al. | 2011
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Probing the Membrane Potential of Liposomes with Impedance SpectroscopyRajapakshe, Kimal I. et al. | 2011
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Insights Into the Interaction of a Model Membrane Binding Protein, Annexin A5, with Calcium ion and Phospholipids Garnered via Isothermal Titration CalorimetryJaworski, Samantha R. et al. | 2011
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Miscibility of Ternary Membranes Containing Charged Lipids and Confirmation of Membrane Composition by Mass SpectrometryBlosser, Matthew C. et al. | 2011
-
Non Invasive Inference of Chemotaxis Responses from Bacterial Trajectoriesmasson, jean-baptiste et al. | 2011
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Unraveling the Specific Interactions of Collectin with LipopolysaccharidesGourion-Arsiquaud, Samuel et al. | 2011
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Transient Protein-Protein Interactions in the IDP Alpha-Synuclein Detected by NMR: Implications for Protein AggregationWu, Kuen-Phon et al. | 2011
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TRPAI is a Co2 Sensor in NociceptorsWang, Yuanyuan et al. | 2011
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The Calcium Channel Single Channel Conductance Heirarchy is N>L>T at Physiological External Calcium: Implications for Presynaptic Transmitter Release Site GatingStanley, Elise F. et al. | 2011
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Towards Finding a Better Reaction Coordinate: NtrC and DIMSPerilla, Juan R. et al. | 2011
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Molecular and Structural Insight for the Role of Key Residues of Thrombospondin-1 and Calreticulin in Thrombospondin-1- Calreticulin BindingYan, Qi et al. | 2011
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Evolutionarily Conserved Linkage Between Enzyme Fold, Flexibility, and CatalysisAgarwal, Pratul K. et al. | 2011
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Synthetic Adhesion and Migration Models of Living CellsKreidler, Christian et al. | 2011
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Probing the Kinetic Network of Folding-Unfolding Transitions in ProteinsMurphy, Ronan D. et al. | 2011
-
The Characterization of the Binding of Opacity-Associated Proteins to Human Host Cell ReceptorsHodges, Jacqueline C. et al. | 2011
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Amyloid Aggregates Alter the Membrane Mobility of GM1 GangliosidesCalamai, Martino et al. | 2011
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Contributions of Structural t-Tubule Heterogeneities and Membrane Ca2+ Flux Localization to Local Ca2+ Signaling in Rabbit Ventricular MyocytesKekenes-Huskey, Peter M. et al. | 2011
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Voltage Sensing in CNG ChannelsMarchesi, Arin et al. | 2011
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Analysis and Minimization of Ligand Concentration Errors at the Internal Face of Excised PatchesKusch, Jana et al. | 2011
-
PI3 Kinase-Mediated Pathways Activate TRPC Channels in Vascular MyocytesAlbert, Anthony P. et al. | 2011
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The Ca/Mg Sites of Troponin C Can Modulate Crossbridge-Mediated Thin Filament Activation in Rat Cardiac MyofibrilsFuchs, Franklin et al. | 2011
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Function Control of Kinesin using Functionality Loop L5 of Kinesin Midified Photochromic MoleculeIshikawa, Kumiko et al. | 2011
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Dual Molecule Assay to Investigate the Mechanics of Homology Search and Recognition in RecombinationDe Vlaminck, Iwijn et al. | 2011
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Interaction and Regulation of Calcium Homeostasis by TRPV Channels and SPCA2 in Breast CancerCross, Brandie M. et al. | 2011
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On the Role of Src Family Kinases in Cyclic Strain Induced Cell ReorientationNiediek, Verena et al. | 2011
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The HCM-Linked Ala13thr Mutation in the Cardiac Myosin Regulatory Light Chain Increases Isometric Force ProductionKazmierczak, Katarzyna et al. | 2011
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Electrostatically Biased Binding of Kinesin to MicrotubulesGrant, Barry J. et al. | 2011
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Expression of Slow Tropomyosin (TM-) in Fast Fibers of Extraocular MusclesReiser, Peter J. et al. | 2011
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Acetylation of Alpha Tubulin Lysine-40 Alone is not Sufficient for Changes in Kinesin-1 MotilityKaul, Neha et al. | 2011
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The Switch II Region is Critical for the Formation of the Open Cleft Weak Binding Conformation in Myosin VTrivedi, Darshan V. et al. | 2011
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Biophysical Analysis of Microtubule Motor Traffic JamsConway, Leslie et al. | 2011
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Deducing Kinetochore Protein Distributions along and Around a Microtubule Plus-End from FRET MeasurementsLawrimore, Joshua et al. | 2011
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Chimeric Kinesin I/Eg5 Constructs Reveal Important Elements to Motor ActivityHesse, William R. et al. | 2011
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A model with Heterogeneous Half-Sarcomeres Exhibits Residual Force Enhancement After Active StretchCampbell, Stuart G. et al. | 2011
-
Altered Cross-Bridge Kinetics and Increased Force Production in Presence of a Myosin Heavy Chain IIb MutantLindqvist, Johan et al. | 2011
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Fiber Myosin Heavy Chain Polymorphism is Associated with a Heightened Susceptibility to Eccentric DamageChoi, SeungJun et al. | 2011
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Bovine Cytochrome Oxidase Structures Enable Molecular Oxygen Reduction without Formation of Active Oxygen Species, Providing a Proton Pumping GateYoshikawa, Shinya et al. | 2011
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Classifying Substrate Specificities of Membrane Transporters from Arabidopsis ThalianaSchaadt, Nadine S. et al. | 2011
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Transport of Small Molecules across the Bacterial Translocation Channel SecYEGKnyazev, Denis et al. | 2011
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Electron-Beam Fabrication of Micron-Scale Birefringent Quartz Particles for Optical Torque WrenchesHuang, Zhuangxiong et al. | 2011
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Analysis of Amino Acid Sidechain Chi1, Chi2 Conformational Properties Using Quantum Mechanical and Experimental Crystallographic Survey DataZhu, Xiao et al. | 2011
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Simultaneous AFM Force Spectroscopy and FRET Measurements on Single Biological MoleculesLi, Hui et al. | 2011
-
Probing the Structural and Dynamic Properties of KCNE1 Using Site-Directed Spin Labeling EPR SpectroscopyTroxel, Kaylee R. et al. | 2011
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Accommodating Drift in Hidden Markov Analysis of Single-Molecule DataEmanuel, George A. et al. | 2011
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Trauma-Induced Changes in Recombinant and Native Nav1.2 Channel KineticsMartina, Marzia et al. | 2011
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Ab-Initio Protein Folding and Small Molecule Dissociation by Potential Energy Based Biased Molecular DynamicsBascom, Gavin et al. | 2011
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Computational Studies of Interfacial Binding Dynamics of Phospholipase A2Manukyan, Anna et al. | 2011
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Structure Based Virtual Inhibitor Screening of Membrane Channel ProteinsWacker, Sören et al. | 2011
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A Novel United-Atom Force Field for PhosphatidylglycerolsMäättä, Jukka et al. | 2011
-
DNA Condensation Revisited: Spermidine-Induced Novel DNA Networks on Mica SurfacesChandran, Preethi et al. | 2011
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Computational Analysis of the TGF-Beta and BMP Signal Transduction PathwaysHo, Jonathan et al. | 2011
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Mathematical Analysis of Bursting Mechanisms in Pancreatic β-CellsCha, Chae Young et al. | 2011
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Dynasome: How Does Protein Structure and Function Relate to Dynamics?Hensen, Ulf et al. | 2011
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Global Order and Self-Organization in the Escherichia Coli Cell WallShaevitz, Joshua W. et al. | 2011
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A Comparative Molecular Dynamics Study of the Effect of Alpha-Tocopherol and Cholesterol on Phospholipid Bilayers having Different Levels of Acyl Chain UnsaturationGorman, James et al. | 2011
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A Microfluidic Cell Sorter for Directed Evolution of Fluorescent Proteins Based on Dark-State Conversion and PhotobleachingLubbeck, Jennifer L. et al. | 2011
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Two Distinct Overstretched DNA StatesFu, Hongxia et al. | 2011
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Homo- and Hetero-FRET Imaging of Membrane Proteins in Live CellsLo, Jocelyn R. et al. | 2011
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AFM Stiffness Nanotomography of Normal, Metaplastic and Dysplastic Human Esophageal CellsStaunton, Jack R. et al. | 2011
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Probing T-Tubular Electrophysiology by Random Access Two-Photon Microscopy in Cardiac MyocytesSacconi, Leonardo et al. | 2011
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A general Approach to Measure Three-Dimensional Forces from CellsLegant, Wesley R. et al. | 2011
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N-Way FRET Microscopy for Imaging Multiple Protein Interactions Within a Single Living CellHoppe, Adam D. et al. | 2011
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In Vivo Identification of Changes in Metabolic State as Stem Cells Differentiate, by Phasor Analysis of Fluorescence Lifetime ImagingStringari, Chiara et al. | 2011
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Multiplexed Time Lapse Fluorescence Lifetime Readouts in an Optically Sectioning Time-Gated Imaging MicroscopeMargineanu, Anca et al. | 2011
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Apocynin Induces Rapid Inhibition and Slow Facilitation of I Ca,L and Decrease and Increase of Reactive Oxygen Species in Rat Ventricular MyocytesOchi, Rikuo et al. | 2011
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TrbB from Conjugative Plasmid F: A Representative of a New Class of Dsbd-Dependent Disulfide IsomerasesHemmis, Casey et al. | 2011
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Single-Molecule Enzymology: Studies on Glutathione-S-TransferasesNath, Abhinav et al. | 2011
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Bind’NGO: Flexible Docking Model for Multiprotein Complexes with Intrinsically Disordered SegmentsKim, Youngchan et al. | 2011
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Human Myoglobin: Two Isoforms that Differ at Single Residue. Their Different Dynamics Suggest Distinct and Complementary RoleScorciapino, Mariano A. et al. | 2011
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Protein Flexibility and Energy Flow During Enzyme CatalysisRamanathan, Arvind et al. | 2011
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Structural Consequences of Epitaxial Assembly Constraints Imposed on Amyloid ß25-35 FibrilsMurvai, Ünige et al. | 2011
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Lipid Bilayer Insertion of OmpA from E. coli Requires the Association of Neighboring β-Strands, Revealed by Intramolecular Site Directed Fluorescence QuenchingKleinschmidt, Joerg H. et al. | 2011
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The Holding and Folding Chaperone Properties of Two Small Heat-Shock Pair Proteins IbpA and IbPB of Escherichia ColiAsrafuzzaman, Syed et al. | 2011
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A structural Role for Serotonin Transporter Terminal Domains in Uptake RegulationFenollar-Ferrer, Cristina et al. | 2011
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Early-Aggregation Studies of Diabetic Amyloid in Solution and MembranesSingh, Sadanand et al. | 2011
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Cytoskeletal Control of Receptor Diffusion in Membrane Promotes CD36 Function and SignalingJaqaman, Khuloud et al. | 2011
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Biophysical Approaches to Discovery of Novel Antibacterial LeadsSanyal, Gautam et al. | 2011
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Cyanylated Cysteine used to Characterize Binding Interfaces of Calcium Binding ProteinsDalton, Shannon R. et al. | 2011
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Total Synthesis of Moscatilines and Wedelolactones as Potential Inhibitors of Anti-Metastic Agents in MDA-MB-231 CellsLee, Yean-Jang et al. | 2011
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Making Substrates Out of Inhibitors: Distal Cavity Mutations in Dehaloperoxidase from Amphitrite OrnataPlummer, Ashlee M. et al. | 2011
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Modes of SH3-Domain Interactions of 18.5 kDa Myelin Basic Protein IN Vitro and in OligodendrocytesDe Avila, Miguel et al. | 2011
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Empirical Method For Calculation of Pka Values of Internal Ionizable Groups in ProteinsFitch, Carolyn A. et al. | 2011
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Dynamic Competition for the Proximal RNA Binding Site of Hfq Drives Efficient Annealing of Small Noncoding RNA and mRNAHwang, Wonseok et al. | 2011
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DNA Unwinding Mechanism of a RecQ Helicase from Arabidopsis Thaliana Investigated with Magnetic TweezersKlaue, Daniel et al. | 2011
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Probing the RNA Binding Surface of the HIV-1 Nucleocapsid Protein by Site-Directed MutagenesisOuyang, Wei et al. | 2011
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Reconstitution of Bacterial Plasmid Segregation and its Dynamic Pattern FormationHwang, Ling Chin et al. | 2011
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The Involvement of DNA Mismatch in Repair of DSBs with Non-Cohesive DNA Ends by the Pol I DNA Polymerases from Escherichia coli and Thermus aquaticusYang, Yanling et al. | 2011
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Investigation of the Binding Interaction of S. cerevisiae MutS Homologs MSH2-MSH6 and MSH4-MSH5 with Holliday JunctionsLi, Yan et al. | 2011
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Identification of P-Type ATPases in a Cell Line of AEDES Albolpicture C6/36Gamez, Adriana D. et al. | 2011
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Capturing Large-Scale Conformational Dynamics of P-Glycoprotein by MD SimulationsWen, Po-Chao et al. | 2011
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High-Speed Single Quantum Dot Imaging of in Live Cells Reveal Hop DiffusionLagerholm, Christoffer et al. | 2011
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Membrane Cholesterol Strongly Influences Hop-Diffusion of PrestinKamar, Ramsey I. et al. | 2011
-
Binding of GlyH-101 in the Pore of the CFTR Chloride ChannelNorimatsu, Yohei et al. | 2011
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Angiotensin II Type 1 receptor Associates with Maxik Channel Alpha Subunit and Inhibits its ActivityZhang, Zhu et al. | 2011
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On the Mechanism Underlying the Irreversible Desensitization of Human Ganglionic Nicotinic ReceptorsPapke, David et al. | 2011
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Higher Order Structure of TMEM16a/Anoctamin-1 as Compared to Other Chloride-Conducting ChannelsFallah, Ghada et al. | 2011
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Functional Effects of Cornichon Proteins on Homomeric Glua1 AMPAR Single-ChannelsShelley, Christopher et al. | 2011
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Channel-Opening Kinetic Mechanism for Human Wild-Type Gluk2 and the M867i Mutant Kainate ReceptorHan, Yan et al. | 2011
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Mscl Channels as Nanovales for the Controlled Release of Liposome-Encapsulated CompoundsFoo, Alexander F.-W. et al. | 2011
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Potent and Selective Inhibition of the Open-Channel Conformation of AMPA Receptors by an RNA AptamerHuang, Zhen et al. | 2011
-
Outward Currents Through “low” Conductance Non-Mechanosensitive Channels in Escherichia Coli MembranesCox, Charles D. et al. | 2011
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Nicotinic Receptors Investigated Using a Next Generation Automated Patch Clamp SystemJohnson, Juliette et al. | 2011
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Contributions of Carboxy-Terminal Domains to NMDA Receptor GatingMaki, Bruce E. et al. | 2011
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Altered Force Development in Response to Calcium and Isopreterenol in Cardiac Muscle from Gravin Knock-Out (AKAP12) MiceGao, Wei Dong et al. | 2011
-
Gsk Mediates Rapid Estrogen-Induced Cardioprotection Without Akt Activation After Ischemia/ReperfusionBopassa, Jean Chrisostome et al. | 2011
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Unzip Single Protein Zippers using Optical TweezersZhang, Yongli et al. | 2011
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Elasticity of Developing Cardiac Tissue and Influence on Early Cardiomyocyte BeatingMajkut, Stephanie F. et al. | 2011
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Dynamic Skeletal Muscle Exercise and Fatigue Development in Post Infarction Heart Failure Rats and Effect of Warm-UpHortemo, Kristin H. et al. | 2011
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Actin Filament Patterning by Myosin MotorsMolloy, Justin E. et al. | 2011
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A new Role for the Dynamin Gtpase as a timer that Controls Fusion Pore ExpansionAnantharam, Arun et al. | 2011
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Cell Motility on Varying Substrate StiffnessHoffman, Joshua et al. | 2011
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Structural Dynamics of the Actin-Binding Domains in Dystrophin and UtrophinLin, Ava Y. et al. | 2011
-
The Interplay of Nonlinearity and Architecture in Cytoskeletal MechanicsWang, Shenshen et al. | 2011
-
Observations of X-Ray Radiation Pressure Force Using High-Speed Diffracted X-Ray TrackingSasaki, Yuji C. et al. | 2011
-
Dynamics of the Drosophila Circadian Clock: Theoretical Anti-Jitter Network and Controlled ChaosFathallah-Shaykh, Hassan M. et al. | 2011
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Conformational Relaxation and Water Penetration Triggered by the Ionization of Internal Groups in ProteinsDamjanovic, Ana et al. | 2011
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Orientation-Independent DIC Microscopy with Fast Switching Shear Direction and its ApplicationsShribak, Michael et al. | 2011
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Helex: an Evolutionary Tabu Search Strategy for the Identification of Helical Regions in cryo-Electron Microscopy ReconstructionsRusu, Mirabela et al. | 2011
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Assessing the Metabolic State of Cultured Cells and the Intact Cochlea by Two-Photon Fluorescence Intensity and Lifetime ImagingNichols, Michael G. et al. | 2011
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Quantifying the Effect of Detergent on Interactions between Nanoparticles and a Model Cell MembraneMeredyth, Nicole A. et al. | 2011
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Graduate Program in Cell Analysis and ModelingWolgemuth, Charles W. et al. | 2011
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Formation of Tethered Bilayer Lipid Membranes(TBLM) from Mixed Lipid-Detergent MicellesGoh, Haw Zan et al. | 2011
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Interdisciplinary Learning Experience in BiophotonicsGleeson, James T. et al. | 2011
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The Transmembrane Domain (TMD)AS a Candidate for the Voltage Sensor in Fusion Mediated by Class II and Class III Viral Fusion ProteinsMarkosyan, Ruben et al. | 2011
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Incorporation of Membrane Proteins and Electrodes into a Suspended Lipid Bilayer PlatformHughes, Laura D. et al. | 2011
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Phosphatidyl Serine Containing Liposomes on Titania: Phase Behaviour, Bilayer Formation, and Lipid AsymmetryCamarero, Sandra et al. | 2011
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Elucidation of Carbohydrate-Phospholipid Interactions - a Quantum Chemical StudyParthasarathi, Ramakrishnan et al. | 2011
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A study of Functional ion Transport Using Tethered MembranesCornell, Bruce A. et al. | 2011
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Molecular Dynamics Simulation Studies of Cardiolipin BilayersSong, Kevin C. et al. | 2011
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Molecular Modeling of Domain Formation upon Protein Adsorption in Lipid BilayersGrillo, Doris M. et al. | 2011
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Visualisation of the Cytoskeleton in Cardiac Myocytes from a Model of Atrial FibrillationLipp, Peter et al. | 2011
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Protective Bacterial Toxin TisB Produces Well-Defined Anion-Selective Pores in Planar Lipid BilayersGurnev, Philip A. et al. | 2011
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Proton Transfer via Protein Bound Water MoleculesGerwert, Klaus et al. | 2011
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Correlative Microscopy of Living Cells between Fluorescence and Quantitative Phase Imaging with a High Resolution Wavefront SensorSavatier, Julien et al. | 2011
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Stability of the Cytoplasmic Dimer Assembly Regulates the Thermosensitive Gating of the Voltage-Gated H+ ChannelFujiwara, Yuichiro et al. | 2011
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Partial Single Base Flipping is Sufficient to Enable Strand Slippage at DNA Duplex TerminiBanavali, Nilesh K. et al. | 2011
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Insertion of Amphipathic Helices into Membranes Depends on the Spontaneous Curvature of the Lipid SystemStrandberg, Erik et al. | 2011
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Resolution of Sample Heterogeneity in Solid-State NMR Dipolar Recoupling and Magic Angle Spinning Sideband AnalysesGehman, John D. et al. | 2011
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Conformational Space and Dynamics of Sodium-Coupled SymportersBeckstein, Oliver et al. | 2011
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A versatile Bilayer Phase for the Studies of Transmembrane Proteins’ AssociationRayan, Gamal et al. | 2011
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pH Dependence of the Adhesion Property of Lipid Bilayers and a Method of Measuring the Adhesion EnergySun, Yen et al. | 2011
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Kinesin-1/Hsc70-Dependent Mechanism of Slow Axonal Transport and its Relation to Fast Axonal TransportTerada, Sumio et al. | 2011
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Design, Function and Structure of a Monomeric CLC TransporterRobertson, Janice et al. | 2011
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Growing Electrical Connections in Living CellsJensen, Heather M. et al. | 2011
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Mode Shift of the Voltage Sensors in Shaker K+ Channels is Caused by Energetic Coupling to the Pore DomainHaddad, Georges A. et al. | 2011
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Monitoring of Protein Conformational Changes Upon Interaction with Low Molecular Weight Compounds by QCM-D and its Application to Drug DiscoveryNilebäck, Erik et al. | 2011
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Molecular Replacement for Multi-Domain Structures Using Packing ModelsYan, Yan et al. | 2011
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The Structure of Atp Synthase from Bovine Heart Mitochondria by Single Particle Electron CryomicroscopyBaker, Lindsay A. et al. | 2011
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Orchestrating Population Shifts of Native Proteins in Different EnvironmentsAtilgan, AliRana et al. | 2011
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New Tools to Peek and Poke at Rapid Signaling in Living SystemsHahn, Klaus et al. | 2011
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Mechanism of Flexibility Control for ATP Access of Hepatitis C Virus NS3 HelicasePalla, Mirko et al. | 2011
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Novel Amphiphilic Molecules Mediate Membrane Protein Crystal ContactsZhang, Qinghai et al. | 2011
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Structural Properties of Syntaxin-1A and its Changes Following Binding of Munc-18Dawidowski, Damian et al. | 2011
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Investigation of the Three-Dimensional Structure of the Caveolin-1 membrane Interacting DomainLee, Jinwoo et al. | 2011
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Specific Basic and Aromatic Residues Optimize the Nucleic Acid Chaperone Activity of HIV-1 Nucleocapsid ProteinWu, Hao et al. | 2011
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Effect of Ribosomal Surface on Nascent Chain DynamicsZou, Taisong et al. | 2011
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Resolving Stability Contributions in the Consensus Tetratricopeptide RepeatMarold, Jacob D. et al. | 2011
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Rational Design of Early Premortem Alzheimer's Disease Diagnostic AgentsCisek, Katryna K. et al. | 2011
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Direct Observation of Torsional Motion of Group II ChaperoninSekiguchi, Hiroshi et al. | 2011