ACTA CRYSTALLOGRAPHICA SECTION D
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Table of contents
- 1513
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Asymmetries in the nucleosome core particle at 2.5 Å resolutionHarp, Joel M. / Hanson, B. Leif / Timm, David E. et al. | 2000
- 1513
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Research papers - Asymmetries in the nucleosome core particle at 2.5 °A resolution - The structure of the nucleosome core particle at 2.5 °A resolution is presented. Asymmetries found in the structure are examined and discussed along with details of ion binding, hydration and lattice-packing interactions.Harp, J.M. et al. | 2000
- 1535
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Research papers - A systematic case study on using NMR models for molecular replacement: p53 tetramerization domain revisited - A systematic molecular-replacement case study revealed an approximate correlation between the accuracy of an NMR search model and the clarity and quality of the solution. Ensemble models were found to have a larger tolerance in inaccuracy than single averaged models and are more likely to lead to success.Chen, Y.W. et al. | 2000
- 1535
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A systematic case study on using NMR models for molecular replacement: p53 tetramerization domain revisitedChen, Yu Wai / Clore, G. Marius et al. | 2000
- 1541
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Research papers - R6 hexameric insulin complexed with m-cresol or resorcinol - The structures of three R6 hexameric insulin structures are reported, two of which are monoclinic and complexed with either m-cresol or resorcinol, and one rhombohedral complexed with m-cresol.Smith, G.D. et al. | 2000
- 1541
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R6 hexameric insulin complexed with m-cresol or resorcinolSmith, G. David / Ciszak, Ewa / Magrum, Lucy A. et al. | 2000
- 1549
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Research papers - The first protein crystal structure determined from high-resolution X-ray powder diffraction data: A variant of T3R3 human insulin-zinc complex produced by grinding - High-resolution synchrotron X-ray powder diffraction data have been used to solve the crystal structure of a new variant T3R3 human insulin-zinc complex produced by mechanical grinding of a polycrystalline sample.Dreele, R.B.Von et al. | 2000
- 1549
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The first protein crystal structure determined from high-resolution X-ray powder diffraction data: a variant of T3R3 human insulin–zinc complex produced by grindingVon Dreele, R. B. / Stephens, P. W. / Smith, G. D. et al. | 2000
- 1554
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Research papers - Ab initio phasing of a 4189-atom protein structure at 1.2 °A resolution - The phases have been determined directly of the 59 kDa protein OppA co-crystallized with uranyl ions.Tame, J.R.H. et al. | 2000
- 1554
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Ab initio phasing of a 4189-atom protein structure at 1.2 Å resolutionTame, Jeremy R. H. et al. | 2000
- 1560
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Research papers - Structure of a family IIIa scaffoldin CBD from the cellulosome of Clostridium cellulolyticum at 2.2 °A resolution - The crystal structure of the family IIIa cellulose-binding domain (CBD) from the cellulosomal scaffoldin subunit of C. cellulolyticum was determined. The structure proved very similar to the previously elucidated scaffoldin CBD from C thermocellum, which enabled comparative analysis of possible functional consequences in the shallow groove and cellulose-binding faces among various CBD families.Shimon, L.J.W. et al. | 2000
- 1560
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Structure of a family IIIa scaffoldin CBD from the cellulosome of Clostridium cellulolyticum at 2.2 Å resolutionShimon, Linda J. W. / Pagès, Sandrine / Belaich, Anne et al. | 2000
- 1569
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Research papers - Zinc-calcium- and cadmium-cadmium-substituted concanavalin A: Interplay of metal binding, pH and molecular packing - The crystal structures of ZnCa con A at pH 6.15 and CdCd con A at pH 5.0 reveal the role of the crystal environment in the structure of the protein surface. Alternative molecular packings of the con A subunits are established to satisfy the interdependent conditions of pH, quaternary structure and crystal packing. These packings are further stabilized by the formation of supplementary metal-binding sites, S3 and S4.Bouckaert, J. et al. | 2000
- 1569
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Zinc/calcium- and cadmium/cadmium-substituted concanavalin A: interplay of metal binding, pH and molecular packingBouckaert, Julie / Loris, Remy / Wyns, Lode et al. | 2000
- 1577
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Structure of cytochrome c6 from the red alga Porphyra yezoensis at 1.57 Å resolutionYamada, Seiji / Park, Sam Yong / Shimizu, Hideaki et al. | 2000
- 1577
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Research papers - Structure of cytochrome c6 from the red alga Porphyra yezoensis at 1.57 °A resolution - The crystal structure of cytochrome c6 from the red alga P. yezoensis has been determined at 1.57 °A resolution. The sequence and the structure of the eukaryotic red algal cytochrome c6 are very similar to those of a prokaryotic cyanobacterial cytochrome c6 rather than those of eukaryotic green algae c6 cytochromes.Yamada, S. et al. | 2000
- 1583
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Research papers - Characterization of crystal content by ESI-MS and MALDI-MS - A general approach based on mass spectrometry is described for the rapid identification of the content of macromolecular crystals.Potier, N. et al. | 2000
- 1583
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Characterization of crystal content by ESI–MS and MALDI–MSPotier, N. / Lamour, V. / Poterszman, A. et al. | 2000
- 1591
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Research papers - ConfMatch: Automating electron-density map interpretation by matching conformations - ConfMatch is a global real-space fitting procedure that builds a detailed protein model directly from the initial electron-density map. Experiments have shown that ConfMatch may be able to fully automate the interpretation of density maps of small proteins.Wang, C.E. et al. | 2000
- 1591
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ConfMatch: automating electron-density map interpretation by matching conformationsWang, Cheuksan Edward et al. | 2000
- 1612
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Research papers - General quadratic functions in real and reciprocal space and their application to likelihood phasing - The properties of a class of quadratic summations are examined under Fourier transformation of the working variables. The relationship with reciprocal-space (likelihood-based) solvent flattening is examined.Cowtan, K. et al. | 2000
- 1612
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General quadratic functions in real and reciprocal space and their application to likelihood phasingCowtan, Kevin et al. | 2000
- 1622
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An approach to multi-copy search in molecular replacementVagin, Alexei / Teplyakov, Alexei et al. | 2000
- 1622
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Research papers - An approach to multi-copy search in molecular replacement - The molecular-replacement method has been extended to a simultaneous search for multiple copies of the macromolecule in the unit cell using a special translation function.Vagin, A. et al. | 2000
- 1625
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Crystallization of an AMPA receptor binding domain without agonist: importance of carbohydrate content and flash-cooling conditionsFéthière, James / Andersson, Arnold / Keinänen, Kari et al. | 2000
- 1625
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Research papers - Crystallization of an AMPA receptor binding domain without agonist: Importance of carbohydrate content and flash-cooling conditions - Enzymatic deglycosylation and cryoprotection with MPD improved the resolution of agonist-free AMPA receptor ligand-binding domain crystals from 7 to 2.6 °A.Féthière, J. et al. | 2000
- 1630
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Crystallization of the cytotoxic domain of a ribosome-inactivating colicin in complex with its immunity proteinCarr, Stephen / Walker, Daniel / James, Richard et al. | 2000
- 1630
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Crystallization papers - Crystallization of the cytotoxic domain of a ribosome-inactivating colicin in complex with its immunity protein - The ribonuclease domain of the ribosome-inactivating colicin E3 in complex with its inhibitor immunity protein has been crystallized. The crystals belong to the space group P3t21 or its enantiomorph, with unit-cell parameters aCarr, S. et al. | 2000
- 1634
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Crystallization of the Mycobacterium tuberculosis cell-division protein FtsZLeung, Adelaine K. W. / White, E. Lucile / Ross, Larry J. et al. | 2000
- 1634
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Crystallization papers - Crystallization of the Mycobacterium tuberculosis cell-division protein FtsZ Several crystal forms of FtsZ, an essential cell-division protein of mycobacteria, are described, including that of a complex with a novel polymerization inhibitor, SRI-7614.Leung, A.K.W. et al. | 2000
- 1638
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A legume lectin from the bark of Robinia pseudoacacia crystallizes in two crystal forms: preliminary diffraction analysesRabijns, A. / Verboven, C. / Van Damme, E. J. M. et al. | 2000
- 1638
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Crystallization papers - A legume lectin from the bark of Robinia pseudoacacia crystallizes in two crystal forms: Preliminary diffraction analyses - Crystals suitable for structural analysis have been prepared from RPbAI, a legume lectin from R. pseudoacacia.Rabijns, A. et al. | 2000
- 1641
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Crystallization papers - Crystallization of retinol dehydratase from Spodoptera frugiperda: Improvement of crystal quality by modification by ethylmercurythiosalicylate - The quality of a crystal of retinol dehydratase is significantly improved with covalent modification of the protein by ethylmercury.Pakhomova, S. et al. | 2000
- 1641
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Crystallization of retinol dehydratase from Spodoptera frugiperda: improvement of crystal quality by modification by ethylmercurythiosalicylatePakhomova, Svetlana / Luz, John G. / Kobayashi, Mime et al. | 2000
- 1644
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Crystallization and preliminary analysis of neurolysinLian, Wei / Chen, Guojin / Wu, Donghai et al. | 2000
- 1644
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Crystallization papers - Crystallization and preliminary analysis of neurolysin - Crystals of the neuropeptidase neurolysin have been produced and shown to diffract to high resolution. Circular dichroism studies and sequence-based prediction indicate that the enzyme is primarily a-helical.Lian, W. et al. | 2000
- 1647
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Crystallization and preliminary X-ray analysis of tetracenomycin A2 oxygenase: a flavoprotein hydroxylase involved in polyketide biosynthesisBeynon, John / Rafanan Jr, Elpidio R. / Shen, Ben et al. | 2000
- 1647
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Crystallization papers - Crystallization and preliminary X-ray analysis of tetracenomycin A2 oxygenase: A flavoprotein hydroxylase involved in polyketide biosynthesis - Tetracenomycin A2 oxygenase catalyzes the final step in the biosynthesis of the polyketide natural product tetracenomycin C. Tetracenomycin A2 oxygenase, which contains an FAD cofactor, catalyzes a novel triple hydroxylation reaction.Beynon, J. et al. | 2000
- 1652
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Crystallization and preliminary X-ray diffraction analysis of MspI restriction endonuclease in complex with its cognate DNAO'Loughlin, Terence J. / Xu, Qian / Kucera, Rebecca B. et al. | 2000
- 1652
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Crystallization papers - Crystallization and preliminary X-ray diffraction analysis of MspI restriction endonuclease in complex with its cognate DNA - The crystallization and preliminary characterization of the MspI restriction endonuclease-DNA complex is reported. Crystals belong to the monoclinic space group and diffract to beyond 2.0 °A.O'Loughlin, T.J. et al. | 2000
- 1656
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Purification, crystallization and preliminary X-ray diffraction studies of xanthine dehydrogenase and xanthine oxidase isolated from bovine milkEger, Bryan T. / Okamoto, Ken / Enroth, Cristofer et al. | 2000
- 1656
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Crystallization papers - Purification, crystallization and preliminary X-ray diffraction studies of xanthine dehydrogenase and xanthine oxidase isolated from bovine milk - The structures of both the dehydrogenase and oxidase forms of xanthine oxidoreductase have been determined.Eger, B.T. et al. | 2000
- 1659
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Crystallization and preliminary X-ray analysis of earthworm fibrinolytic enzyme component A from Eisenia fetidaTang, Yong / Zhang, Jiping / Gui, Lulu et al. | 2000
- 1659
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Crystallization papers - Crystallization and preliminary X-ray analysis of earthworm fibrinolytic enzyme component A from Eisenia fetida - Earthworm fibrinolytic enzyme component A, a protein which functions both as a direct fibrinolytic enzyme and a plasminogen activator, has been crystallized in the orthorhombic space group P212121. The single crystals diffract to 1.95 °A resolution using synchrotron radiation.Tang, Y. et al. | 2000
- 1662
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Crystallization of the catalytic domain of murine terminal deoxynucleotidyl transferaseSukumar, N. / Boulé, J. B. / Expert-Bezançon, N. et al. | 2000
- 1662
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Crystallization papers - Crystallization of the catalytic domain of murine terminal deoxynucleotidyl transferase - The catalytic domain of murine terminal deoxynucleotidyl transferase has been crystallized in its active form. The crystals diffract up to 2.4 °A resolution.Sukumar, N. et al. | 2000
- 1665
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Crystallization papers - Crystallization and preliminary crystallographic characterization of recombinant L-methionine-a-deamino-g-mercaptomethane lyase (methioninase) - Recombinant L-methionine-a-deamino-g-mercaptomethane lyase from P. putida has been crystallized. Native data have been collected to 2.68 °A resolution using synchrotron X-rays.Sridhar, V. et al. | 2000
- 1665
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Crystallization and preliminary crystallographic characterization of recombinant L-methionine-α-deamino-γ-mercaptomethane lyase (methioninase)Sridhar, Vandana / Xu, Mingxu / Han, Qinghong et al. | 2000
- 1668
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Crystallization papers - Crystallization and preliminary X-ray analysis of endopolygalacturonase SE1 from Trichosporon penicillatum - Endopolygalacturonase SE1 from T. penicillatum was crystallized and diffracted to 2.0 °A resolution. The crystals belong to the hexagonal space group P61 or P65, with unit-cell parameters aLu, C.-T. et al. | 2000
- 1668
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Crystallization and preliminary X-ray analysis of endopolygalacturonase SE1 from Trichosporon penicillatumLu, Chao Tsang / Tada, Toshiji / Nakamura, Yoshihiro et al. | 2000
- 1670
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Crystallization and preliminary X-ray analysis of a recombinant Fab fragment in complex with 17β-oestradiolLamminmäki, Urpo / Kankare, Jussi et al. | 2000
- 1670
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Crystallization papers - Crystallization and preliminary X-ray analysis of a recombinant Fab fragment in complex with 17 b-oestradiol - A recombinant anti-17b-oestradiol Fab fragment was over-expressed, purified and crystallized in the presence and absence of oestradiol using microseeding and co-crystallization. The crystals diffracted to 2.0 °A resolution and allowed high-resolution X-ray structure determination.Lamminmäki, U. et al. | 2000
- 1673
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Crystallization and preliminary X-ray analysis of adenylylsulfate reductase from Archaeoglobus fulgidusRoth, Annette / Fritz, Günter / Büchert, Thomas et al. | 2000
- 1673
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Crystallization papers - Crystallization and preliminary X-ray analysis of adenylylsulfate reductase from Archaeoglobus fulgidus - Adenylylsulfate reductase from A. fulgidus was purified and crystallized under anaerobic conditions. X-ray diffraction measurement revealed that the crystals diffract beyond 2.0 °A resolution.Roth, A. et al. | 2000
- 1676
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Crystallization papers - Overproduction, purification, crystallization and preliminary X-ray diffraction analysis of YopM, an essential virulence factor extruded by the plague bacterium Yersinia pestis - Crystals of the Y. pestis virulence factor YopM have been obtained by the vapor-diffusion method. The best crystals diffract to 2.4 °A resolution and belong to space group P4222.Evdokimov, A.G. et al. | 2000
- 1676
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Overproduction, purification, crystallization and preliminary X-ray diffraction analysis of YopM, an essential virulence factor extruded by the plague bacterium Yersinia pestisEvdokimov, Artem G. / Anderson, D. Eric / Routzahn, Karen M. et al. | 2000
- 1680
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Crystallization papers - Crystallization and preliminary characterization of crystals of human protein kinase CK2 - Tetrameric protein kinase CK2 holoenzyme from Homo sapiens was successfully crystallized for the first time. The crystals diffract X-rays to at least 3.5 °A resolution. -Niefind, K. et al. | 2000
- 1680
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Crystallization and preliminary characterization of crystals of human protein kinase CK2Niefind, Karsten / Guerra, Barbara / Ermakowa, Inessa et al. | 2000
- 1685
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Crystallization papers - Crystallization, preliminary X-ray analysis and molecular-replacement solution of the carboxy form of haemoglobin I from the fish Brycon cephalus - In this paper, the crystallization, preliminary X-ray analysis and molecular-replacement solution of the carboxy form of haemoglobin I from the fish B. cephalus are described.Honda, R.T. et al. | 2000
- 1685
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Crystallization, preliminary X-ray analysis and molecular-replacement solution of the carboxy form of haemoglobin I from the fish Brycon cephalusHonda, R. T. / Delatorre, P. / Fadel, V. et al. | 2000
- 1688
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Crystallization and preliminary crystallographic investigation of glycosomal pyruvate phosphate dikinase from Trypanosoma bruceiCosenza, Lawrence W. / Bringaud, Frédéric / Baltz, Théo et al. | 2000
- 1688
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Crystallization papers - Crystallization and preliminary crystallographic investigation of glycosomal pyruvate phosphate dikinase from Trypanosoma brucei - The glycosomal enzyme pyruvate phosphate dikinase from T. brucei has been crystallized in space group P21212. A 3.0 °A resolution native data set has been collected at 277 K using monochromatic synchrotron radiation.Cosenza, L.W. et al. | 2000
- 1691
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Crystals of GlpE, a 12 kDa sulfurtransferase from Escherichia coli, display 1.06 Å resolution diffraction: a preliminary reportBordo, Domenico / Larson, Timothy J. / Donahue, Janet L. et al. | 2000
- 1691
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Crystallization papers - Crystals of GipE, a 12 kDa sulfurtransferase from Escherichia coli, display 1.06 °A resolution diffraction: A preliminary report - GipE is the first sulfurtransferase composed of a single rhodanese-like domain to be crystallized. Crystals belong to the P31 (or P32) space group, with one molecule per asymmetric unit.Bordo, D. et al. | 2000
- 1694
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Crystallization and preliminary crystallographic study of b0220, an `ORFan' protein of unknown function from Escherichia coliAbergel, Chantal / Monchois, Vincent / Chenivesse, Sabine et al. | 2000
- 1694
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Crystallization papers - Crystallization and preliminary crystallographic study of b0220, an 'ORFan' protein of unknown function from Escherichia coli - The first E. coli ORFan gene product has been cloned, expressed, purified and crystallized. The MAD method using selenium has been used to solve the selenomethionine-substituted b0220 protein structure.Abergel, C. et al. | 2000
- 1696
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Crystallization and preliminary characterization of crystals of R-alcohol dehydrogenase from Lactobacillus brevisNiefind, Karsten / Riebel, Bettina / Müller, Jörg et al. | 2000
- 1696
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Crystallization papers - Crystallization and preliminary characterization of crystals of R-alcohol dehydrogenase from Lactobacillus brevis - The R-specific alcohol dehydrogenase from L. brevis was successfully crystallized. The crystals diffract X-rays to at least 1.8 °A resolution.Niefind, K. et al. | 2000
- 1699
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Crystallization and preliminary X-ray analysis of two pH-dependent forms of cytochrome c2 from Rhodopseudomonas palustrisGarau, Gianpiero / Geremia, Silvano / Randaccio, Lucio et al. | 2000
- 1699
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Short communications - Crystallization and preliminary X-ray analysis of two pH-dependent forms of cytochrome c2 from Rhodopseudomonas palustris - Cytochrome c2 from R. palustris has been crystallized in two different crystal forms: Monoclinic at pH 4.4 and trigonal at pH 9.0. The preliminary structures show an important change to the iron coordination environment in the trigonal form obtained at basic pH owing to the substitution of the Met ligand by an ammonia molecule.Carau, G. et al. | 2000
- 1702
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The atomic resolution structure of bucandin, a novel toxin isolated from the Malayan krait, determined by direct methods. ErratumKuhn, Peter / Deacon, Ashley M. / Comsa, Doina Silviana et al. | 2000
- 1702
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Addenda and errata - The atomic resolution structure of bucandin, a novel toxin isolated from the Malayan krait, determined by direct methods. Erratum - An erratum to the paper by Kuhn et al. (2000) Acta Cryst. D56, 1401-1407.Kuhn, P. et al. | 2000
- 1703
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Subject index| 2000
- 1710
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Author index| 2000