Nucleic acids research
The tables of contents are generated automatically and are based on the data records of the individual contributions available in the index of the TIB portal. The display of the Tables of Contents may therefore be incomplete.
Table of contents
- D1
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The 2012 Nucleic Acids Research Database Issue and the online Molecular Biology Database CollectionGalperin, Michael Y. / Fernández-Suárez, Xosé M. et al. | 2012
- D9
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Making your database available through Wikipedia: the pros and consFinn, Robert D. / Gardner, Paul P. / Bateman, Alex et al. | 2012
- D13
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Database resources of the National Center for Biotechnology InformationSayers, Eric W. / Barrett, Tanya / Benson, Dennis A. et al. | 2012
- D26
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The Genome Portal of the Department of Energy Joint Genome InstituteGrigoriev, Igor V. / Nordberg, Henrik / Shabalov, Igor et al. | 2012
- D33
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The International Nucleotide Sequence Database CollaborationKarsch-Mizrachi, Ilene / Nakamura, Yasukazu / Cochrane, Guy et al. | 2012
- D38
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The DNA Data Bank of Japan launches a new resource, the DDBJ Omics Archive of functional genomics experimentsKodama, Yuichi / Mashima, Jun / Kaminuma, Eli et al. | 2012
- D43
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Major submissions tool developments at the European nucleotide archiveAmid, Clara / Birney, Ewan / Bower, Lawrence et al. | 2012
- D48
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GenBankBenson, Dennis A. / Karsch-Mizrachi, Ilene / Clark, Karen et al. | 2012
- D54
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The sequence read archive: explosive growth of sequencing dataKodama, Yuichi / Shumway, Martin / Leinonen, Rasko et al. | 2012
- D57
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BioProject and BioSample databases at NCBI: facilitating capture and organization of metadataBarrett, Tanya / Clark, Karen / Gevorgyan, Robert et al. | 2012
- D64
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The BioSample Database (BioSD) at the European Bioinformatics InstituteGostev, Mikhail / Faulconbridge, Adam / Brandizi, Marco et al. | 2012
- D71
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Reorganizing the protein space at the Universal Protein Resource (UniProt)The UniProt Consortium, et al. | 2012
- D76
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neXtProt: a knowledge platform for human proteinsLane, Lydie / Argoud-Puy, Ghislaine / Britan, Aurore et al. | 2012
- D84
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Ensembl 2012Flicek, Paul / Amode, M. Ridwan / Barrell, Daniel et al. | 2012
- D91
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Ensembl Genomes: an integrative resource for genome-scale data from non-vertebrate speciesKersey, Paul J. / Staines, Daniel M. / Lawson, Daniel et al. | 2012
- D98
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GeneDB--an annotation database for pathogensLogan-Klumpler, Flora J. / De Silva, Nishadi / Boehme, Ulrike et al. | 2012
- D109
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KEGG for integration and interpretation of large-scale molecular data setsKanehisa, Minoru / Goto, Susumu / Sato, Yoko et al. | 2012
- D115
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IMG: the integrated microbial genomes database and comparative analysis systemMarkowitz, Victor M. / Chen, I-Min A. / Palaniappan, Krishna et al. | 2012
- D123
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IMG/M: the integrated metagenome data management and comparative analysis systemMarkowitz, Victor M. / Chen, I-Min A. / Chu, Ken et al. | 2012
- D130
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NCBI Reference Sequences (RefSeq): current status, new features and genome annotation policyPruitt, Kim D. / Tatusova, Tatiana / Brown, Garth R. et al. | 2012
- D136
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The NCBI Taxonomy databaseFederhen, Scott et al. | 2012
- D144
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AnimalTFDB: a comprehensive animal transcription factor databaseZhang, Hong-Mei / Chen, Hu / Liu, Wei et al. | 2012
- D150
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DBTSS: DataBase of Transcriptional Start Sites progress report in 2012Yamashita, Riu / Sugano, Sumio / Suzuki, Yutaka et al. | 2012
- D155
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The MAPPER2 Database: a multi-genome catalog of putative transcription factor binding sitesRiva, Alberto et al. | 2012
- D162
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ScerTF: a comprehensive database of benchmarked position weight matrices for Saccharomyces speciesSpivak, Aaron T. / Stormo, Gary D. et al. | 2012
- D169
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YeTFaSCo: a database of evaluated yeast transcription factor sequence specificitiesde Boer, Carl G. / Hughes, Timothy R. et al. | 2012
- D180
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doRiNA: a database of RNA interactions in post-transcriptional regulationAnders, Gerd / Mackowiak, Sebastian D. / Jens, Marvin et al. | 2012
- D187
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Database for bacterial group II intronsCandales, Manuel A. / Duong, Adrian / Hood, Keyar S. et al. | 2012
- D191
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mirEX: a platform for comparative exploration of plant pri-miRNA expression dataBielewicz, Dawid / Dolata, Jakub / Zielezinski, Andrzej et al. | 2012
- D198
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miRNEST database: an integrative approach in microRNA search and annotationSzczesniak, Michal Wojciech / Deorowicz, Sebastian / Gapski, Jakub et al. | 2012
- D205
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NAPP: the Nucleic Acid Phylogenetic Profile DatabaseOtt, Alban / Idali, Anouar / Marchais, Antonin et al. | 2012
- D210
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NONCODE v3.0: integrative annotation of long noncoding RNAsBu, Dechao / Yu, Kuntao / Sun, Silong et al. | 2012
- D216
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PolymiRTS Database 2.0: linking polymorphisms in microRNA target sites with human diseases and complex traitsZiebarth, Jesse D. / Bhattacharya, Anindya / Chen, Anlong et al. | 2012
- D222
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TarBase 6.0: capturing the exponential growth of miRNA targets with experimental supportVergoulis, Thanasis / Vlachos, Ioannis S. / Alexiou, Panagiotis et al. | 2012
- D230
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VIRsiRNAdb: a curated database of experimentally validated viral siRNA/shRNAThakur, Nishant / Qureshi, Abid / Kumar, Manoj et al. | 2012
- D237
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CharProtDB: a database of experimentally characterized protein annotationsMadupu, Ramana / Richter, Alexander / Dodson, Robert J. et al. | 2012
- D242
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ELM--the database of eukaryotic linear motifsDinkel, Holger / Michael, Sushama / Weatheritt, Robert J. et al. | 2012
- D252
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Minimotif Miner 3.0: database expansion and significantly improved reduction of false-positive predictions from consensus sequencesMi, Tian / Merlin, Jerlin Camilus / Deverasetty, Sandeep et al. | 2012
- D261
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PhosphoSitePlus: a comprehensive resource for investigating the structure and function of experimentally determined post-translational modifications in man and mouseHornbeck, Peter V. / Kornhauser, Jon M. / Tkachev, Sasha et al. | 2012
- D271
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MimoDB 2.0: a mimotope database and beyondHuang, Jian / Ru, Beibei / Zhu, Ping et al. | 2012
- D278
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SitEx: a computer system for analysis of projections of protein functional sites on eukaryotic genesMedvedeva, Irina / Demenkov, Pavel / Kolchanov, Nikolay et al. | 2012
- D284
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eggNOG v3.0: orthologous groups covering 1133 organisms at 41 different taxonomic rangesPowell, Sean / Szklarczyk, Damian / Trachana, Kalliopi et al. | 2012
- D290
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The Pfam protein families databasePunta, Marco / Coggill, Penny C. / Eberhardt, Ruth Y. et al. | 2012
- D302
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SMART 7: recent updates to the protein domain annotation resourceLetunic, Ivica / Doerks, Tobias / Bork, Peer et al. | 2012
- D306
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InterPro in 2011: new developments in the family and domain prediction databaseHunter, Sarah / Jones, Philip / Mitchell, Alex et al. | 2012
- D313
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ProtoNet 6.0: organizing 10 million protein sequences in a compact hierarchical family treeRappoport, Nadav / Karsenty, Solange / Stern, Amos et al. | 2012
- D321
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BYKdb: the Bacterial protein tYrosine Kinase databaseJadeau, Fanny / Grangeasse, Christophe / Shi, Lei et al. | 2012
- D325
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ConoServer: updated content, knowledge, and discovery tools in the conopeptide databaseKaas, Quentin / Yu, Rilei / Jin, Ai-Hua et al. | 2012
- D331
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A comprehensive manually curated protein-protein interaction database for the Death Domain superfamilyKwon, Dongseop / Yoon, Jong Hwan / Shin, Soo-Yong et al. | 2012
- D337
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HIstome--a relational knowledgebase of human histone proteins and histone modifying enzymesKhare, Satyajeet P. / Habib, Farhat / Sharma, Rahul et al. | 2012
- D343
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MEROPS: the database of proteolytic enzymes, their substrates and inhibitorsRawlings, Neil D. / Barrett, Alan J. / Bateman, Alex et al. | 2012
- D351
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TopFIND 2.0--linking protein termini with proteolytic processing and modifications altering protein functionLange, Philipp F. / Huesgen, Pitter F. / Overall, Christopher M. et al. | 2012
- D362
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MIPModDB: a central resource for the superfamily of major intrinsic proteinsGupta, Anjali Bansal / Verma, Ravi Kumar / Agarwal, Vatsal et al. | 2012
- D370
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OPM database and PPM web server: resources for positioning of proteins in membranesLomize, Mikhail A. / Pogozheva, Irina D. / Joo, Hyeon et al. | 2012
- D377
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NucleaRDB: information system for nuclear receptorsVroling, Bas / Thorne, David / McDermott, Philip et al. | 2012
- D381
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Polbase: a repository of biochemical, genetic and structural information about DNA polymerasesLanghorst, Bradley W. / Jack, William E. / Reha-Krantz, Linda et al. | 2012
- D388
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ProGlycProt: a repository of experimentally characterized prokaryotic glycoproteinsBhat, Aadil H. / Mondal, Homchoru / Chauhan, Jagat S. et al. | 2012
- D394
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ProRepeat: an integrated repository for studying amino acid tandem repeats in proteinsLuo, Hong / Lin, Ke / David, Audrey et al. | 2012
- D400
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PubChem's BioAssay DatabaseWang, Yanli / Xiao, Jewen / Suzek, Tugba O. et al. | 2012
- D413
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BitterDB: a database of bitter compoundsWiener, Ayana / Shudler, Marina / Levit, Anat et al. | 2012
- D420
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Crystallography Open Database (COD): an open-access collection of crystal structures and platform for world-wide collaborationGrazulis, Saulius / Daskevic, Adriana / Merkys, Andrius et al. | 2012
- D428
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SCRIPDB: a portal for easy access to syntheses, chemicals and reactions in patentsHeifets, Abraham / Jurisica, Igor et al. | 2012
- D434
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MINAS--a database of Metal Ions in Nucleic AcidSSchnabl, Joachim / Suter, Pascal / Sigel, Roland K. O. et al. | 2012
- D439
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RNA CoSSMos: Characterization of Secondary Structure Motifs--a searchable database of secondary structure motifs in RNA three-dimensional structuresVanegas, Pamela L. / Hudson, Graham A. / Davis, Amber R. et al. | 2012
- D445
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PDBe: Protein Data Bank in EuropeVelankar, S. / Alhroub, Y. / Best, C. et al. | 2012
- D453
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Protein Data Bank Japan (PDBj): maintaining a structural data archive and resource description framework formatKinjo, Akira R. / Suzuki, Hirofumi / Yamashita, Reiko et al. | 2012
- D461
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MMDB: 3D structures and macromolecular interactionsMadej, Thomas / Addess, Kenneth J. / Fong, Jessica H. et al. | 2012
- D465
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Gene3D: a domain-based resource for comparative genomics, functional annotation and protein network analysisLees, Jonathan / Yeats, Corin / Perkins, James et al. | 2012
- D472
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AH-DB: collecting protein structure pairs before and after bindingChang, Darby Tien-Hao / Yao, Tsung-Ju / Fan, Chen-Yu et al. | 2012
- D479
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CAPS-DB: a structural classification of helix-capping motifsSegura, Joan / Oliva, Baldomero / Fernandez-Fuentes, Narcis et al. | 2012
- D486
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ccPDB: compilation and creation of data sets from Protein Data BankSingh, Harinder / Chauhan, Jagat Singh / Gromiha, M. Michael et al. | 2012
- D490
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Cube-DB: detection of functional divergence in human protein familiesZhang, Zong Hong / Bharatham, Kavitha / Chee, Sharon M. Q. et al. | 2012
- D495
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The DARC site: a database of aligned ribosomal complexesJarasch, Alexander / Dziuk, Philipp / Becker, Thomas et al. | 2012
- D501
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DOMMINO: a database of macromolecular interactionsKuang, Xingyan / Han, Jing Ginger / Zhao, Nan et al. | 2012
- D507
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IDEAL: Intrinsically Disordered proteins with Extensive Annotations and LiteratureFukuchi, Satoshi / Sakamoto, Shigetaka / Nobe, Yukiko et al. | 2012
- D512
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IndelFR: a database of indels in protein structures and their flanking regionsZhang, Zheng / Xing, Cheng / Wang, Lushan et al. | 2012
- D519
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NRG-CING: integrated validation reports of remediated experimental biomolecular NMR data and coordinates in wwPDBDoreleijers, Jurgen F. / Vranken, Wim F. / Schulte, Christopher et al. | 2012
- D525
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STAP Refinement of the NMR database: a database of 2405 refined solution NMR structuresYang, Joshua SungWoo / Kim, Ji-han / Oh, Sangho et al. | 2012
- D531
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PASS2 version 4: An update to the database of structure-based sequence alignments of structural domain superfamiliesGandhimathi, A. / Nair, Anu G. / Sowdhamini, R. et al. | 2012
- D535
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Pocketome: an encyclopedia of small-molecule binding sites in 4DKufareva, Irina / Ilatovskiy, Andrey V. / Abagyan, Ruben et al. | 2012
- D541
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PoSSuM: a database of similar protein-ligand binding and putative pocketsIto, Jun-Ichi / Tabei, Yasuo / Shimizu, Kana et al. | 2012
- D549
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ProtChemSI: a network of protein-chemical structural interactionsKalinina, Olga V. / Wichmann, Oliver / Apic, Gordana et al. | 2012
- D554
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PSCDB: a database for protein structural change upon ligand bindingAmemiya, Takayuki / Koike, Ryotaro / Kidera, Akinori et al. | 2012
- D559
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The Gene Ontology: enhancements for 2011The Gene Ontology Consortium, et al. | 2012
- D565
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The UniProt-GO Annotation database in 2011Dimmer, Emily C. / Huntley, Rachael P. / Alam-Faruque, Yasmin et al. | 2012
- D571
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The Genomes OnLine Database (GOLD) v.4: status of genomic and metagenomic projects and their associated metadataPagani, Ioanna / Liolios, Konstantinos / Jansson, Jakob et al. | 2012
- D580
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Identifiers.org and MIRIAM Registry: community resources to provide persistent identificationJuty, Nick / Le Novère, Nicolas / Laibe, Camille et al. | 2012
- D587
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The LANL hemorrhagic fever virus database, a new platform for analyzing biothreat virusesKuiken, Carla / Thurmond, Jim / Dimitrijevic, Mira et al. | 2012
- D593
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ViPR: an open bioinformatics database and analysis resource for virology researchPickett, Brett E. / Sadat, Eva L. / Zhang, Yun et al. | 2012
- D599
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BacMap: an up-to-date electronic atlas of annotated bacterial genomesCruz, Joseph / Liu, Yifeng / Liang, Yongjie et al. | 2012
- D605
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B{mu}G@Sbase--a microbial gene expression and comparative genomic databaseWitney, Adam A. / Waldron, Denise E. / Brooks, Lucy A. et al. | 2012
- D610
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CoryneRegNet 6.0--Updated database content, new analysis methods and novel features focusing on community demandsPauling, Josch / Röttger, Richard / Tauch, Andreas et al. | 2012
- D615
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DBETH: A Database of Bacterial Exotoxins for HumanChakraborty, Abhijit / Ghosh, Sudeshna / Chowdhary, Garisha et al. | 2012
- D621
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ICEberg: a web-based resource for integrative and conjugative elements found in BacteriaBi, Dexi / Xu, Zhen / Harrison, Ewan M. et al. | 2012
- D627
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ProOpDB: Prokaryotic Operon DataBaseTaboada, Blanca / Ciria, Ricardo / Martinez-Guerrero, Cristian E. et al. | 2012
- D632
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ProPortal: a resource for integrated systems biology of Prochlorococcus and its phageKelly, Libusha / Huang, Katherine H. / Ding, Huiming et al. | 2012
- D641
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VFDB 2012 update: toward the genetic diversity and molecular evolution of bacterial virulence factorsChen, Lihong / Xiong, Zhaohui / Sun, Lilian et al. | 2012
- D646
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The UCSC Archaeal Genome Browser: 2012 updateChan, Patricia P. / Holmes, Andrew D. / Smith, Andrew M. et al. | 2012
- D653
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The Aspergillus Genome Database (AspGD): recent developments in comprehensive multispecies curation, comparative genomics and community resourcesArnaud, Martha B. / Cerqueira, Gustavo C. / Inglis, Diane O. et al. | 2012
- D660
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CADRE: the Central Aspergillus Data REpository 2012Mabey Gilsenan, Jane / Cooley, John / Bowyer, Paul et al. | 2012
- D667
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The Candida genome database incorporates multiple Candida species: multispecies search and analysis tools with curated gene and protein information for Candida albicans and Candida glabrataInglis, Diane O. / Arnaud, Martha B. / Binkley, Jonathan et al. | 2012
- D675
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FungiDB: an integrated functional genomics database for fungiStajich, Jason E. / Harris, Todd / Brunk, Brian P. et al. | 2012
- D682
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OriDB, the DNA replication origin database updated and extendedSiow, Cheuk C. / Nieduszynska, Sian R. / Müller, Carolin A. et al. | 2012
- D687
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PhenoM: a database of morphological phenotypes caused by mutation of essential genes in Saccharomyces cerevisiaeJin, Ke / Li, Jingjing / Vizeacoumar, Frederick S. et al. | 2012
- D695
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PomBase: a comprehensive online resource for fission yeastWood, Valerie / Harris, Midori A. / McDowall, Mark D. et al. | 2012
- D700
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Saccharomyces Genome Database: the genomics resource of budding yeastCherry, J. Michael / Hong, Eurie L. / Amundsen, Craig et al. | 2012
- D706
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FlyBase 101 - the basics of navigating FlyBaseMcQuilton, Peter / St. Pierre, Susan E. / Thurmond, Jim et al. | 2012
- D715
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FlyRNAi.org--the database of the Drosophila RNAi screening center: 2012 updateFlockhart, Ian T. / Booker, Matthew / Hu, Yanhui et al. | 2012
- D720
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Nematode.net update 2011: addition of data sets and tools featuring next-generation sequencing dataMartin, John / Abubucker, Sahar / Heizer, Esley et al. | 2012
- D729
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VectorBase: improvements to a bioinformatics resource for invertebrate vector genomicsMegy, Karine / Emrich, Scott J. / Lawson, Daniel et al. | 2012
- D735
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WormBase 2012: more genomes, more data, new websiteYook, Karen / Harris, Todd W. / Bieri, Tamberlyn et al. | 2012
- D742
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The MetaCyc database of metabolic pathways and enzymes and the BioCyc collection of pathway/genome databasesCaspi, Ron / Altman, Tomer / Dreher, Kate et al. | 2012
- D754
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Rhea--a manually curated resource of biochemical reactionsAlcántara, Rafael / Axelsen, Kristian B. / Morgat, Anne et al. | 2012
- D761
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UniPathway: a resource for the exploration and annotation of metabolic pathwaysMorgat, Anne / Coissac, Eric / Coudert, Elisabeth et al. | 2012
- D770
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eQuilibrator--the biochemical thermodynamics calculatorFlamholz, Avi / Noor, Elad / Bar-Even, Arren et al. | 2012
- D776
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FunTree: a resource for exploring the functional evolution of structurally defined enzyme superfamiliesFurnham, Nicholas / Sillitoe, Ian / Holliday, Gemma L. et al. | 2012
- D783
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MACiE: exploring the diversity of biochemical reactionsHolliday, Gemma L. / Andreini, Claudia / Fischer, Julia D. et al. | 2012
- D790
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SABIO-RK--database for biochemical reaction kineticsWittig, Ulrike / Kania, Renate / Golebiewski, Martin et al. | 2012
- D797
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hiPathDB: a human-integrated pathway database with facile visualizationYu, Namhee / Seo, Jihae / Rho, Kyoohyoung et al. | 2012
- D803
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IPAVS: Integrated Pathway Resources, Analysis and Visualization SystemSreenivasaiah, Pradeep Kumar / Rani, Shilpa / Cayetano, Joseph et al. | 2012
- D809
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MMMDB: Mouse Multiple Tissue Metabolome DatabaseSugimoto, Masahiro / Ikeda, Satsuki / Niigata, Kanako et al. | 2012
- D815
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YMDB: the Yeast Metabolome DatabaseJewison, Timothy / Knox, Craig / Neveu, Vanessa et al. | 2012
- D821
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Comparative interactomics with Funcoup 2.0Alexeyenko, Andrey / Schmitt, Thomas / Tjärnberg, Andreas et al. | 2012
- D829
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HotRegion: a database of predicted hot spot clustersCukuroglu, Engin / Gursoy, Attila / Keskin, Ozlem et al. | 2012
- D834
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IBIS (Inferred Biomolecular Interaction Server) reports, predicts and integrates multiple types of conserved interactions for proteinsShoemaker, Benjamin A. / Zhang, Dachuan / Tyagi, Manoj et al. | 2012
- D841
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The IntAct molecular interaction database in 2012Kerrien, Samuel / Aranda, Bruno / Breuza, Lionel et al. | 2012
- D847
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InterEvol database: exploring the structure and evolution of protein complex interfacesFaure, Guilhem / Andreani, Jessica / Guerois, Raphaël et al. | 2012
- D857
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MINT, the molecular interaction database: 2012 updateLicata, Luana / Briganti, Leonardo / Peluso, Daniele et al. | 2012
- D862
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PINA v2.0: mining interactome modulesCowley, Mark J. / Pinese, Mark / Kassahn, Karin S. et al. | 2012
- D866
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Predictive networks: a flexible, open source, web application for integration and analysis of human gene networksHaibe-Kains, Benjamin / Olsen, Catharina / Djebbari, Amira et al. | 2012
- D876
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STITCH 3: zooming in on protein-chemical interactionsKuhn, Michael / Szklarczyk, Damian / Franceschini, Andrea et al. | 2012
- D881
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The Mouse Genome Database (MGD): comprehensive resource for genetics and genomics of the laboratory mouseEppig, Janan T. / Blake, Judith A. / Bult, Carol J. et al. | 2012
- D887
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Mouse Phenome Database (MPD)Maddatu, Terry P. / Grubb, Stephen C. / Bult, Carol J. et al. | 2012
- D895
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Newt-omics: a comprehensive repository for omics data from the newt Notophthalmus viridescensBruckskotten, Marc / Looso, Mario / Reinhardt, Richard et al. | 2012
- D901
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OGEE: an online gene essentiality databaseChen, Wei-Hua / Minguez, Pablo / Lercher, Martin J. et al. | 2012
- D907
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zfishbook: connecting you to a world of zebrafish revertible mutantsClark, Karl J. / Argue, David P. / Petzold, Andrew M. et al. | 2012
- D912
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ENCODE whole-genome data in the UCSC Genome Browser: update 2012Rosenbloom, Kate R. / Dreszer, Timothy R. / Long, Jeffrey C. et al. | 2012
- D918
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The UCSC Genome Browser database: extensions and updates 2011Dreszer, Timothy R. / Karolchik, Donna / Zweig, Ann S. et al. | 2012
- D924
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HGPD: Human Gene and Protein Database, 2012 updateMaruyama, Yukio / Kawamura, Yoshifumi / Nishikawa, Tetsuo et al. | 2012
- D930
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HaploReg: a resource for exploring chromatin states, conservation, and regulatory motif alterations within sets of genetically linked variantsWard, Lucas D. / Kellis, Manolis et al. | 2012
- D935
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SNPeffect 4.0: on-line prediction of molecular and structural effects of protein-coding variantsDe Baets, Greet / Van Durme, Joost / Reumers, Joke et al. | 2012
- D940
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Disease Ontology: a backbone for disease semantic integrationSchriml, Lynn Marie / Arze, Cesar / Nadendla, Suvarna et al. | 2012
- D947
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canSAR: an integrated cancer public translational research and drug discovery resourceHalling-Brown, Mark D. / Bulusu, Krishna C. / Patel, Mishal et al. | 2012
- D957
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COLT-Cancer: functional genetic screening resource for essential genes in human cancer cell linesKoh, Judice L. Y. / Brown, Kevin R. / Sayad, Azin et al. | 2012
- D964
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dbDEPC 2.0: updated database of differentially expressed proteins in human cancersHe, Ying / Zhang, Menghuan / Ju, Yuanhu et al. | 2012
- D972
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IGDB.NSCLC: integrated genomic database of non-small cell lung cancerKao, Sen / Shiau, Cheng-Kai / Gu, De-Leung et al. | 2012
- D978
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Network of Cancer Genes (NCG 3.0): integration and analysis of genetic and network properties of cancer genesD'Antonio, Matteo / Pendino, Vera / Sinha, Shruti et al. | 2012
- D984
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The Stem Cell Discovery Engine: an integrated repository and analysis system for cancer stem cell comparisonsHo Sui, Shannan J. / Begley, Kimberly / Reilly, Dorothy et al. | 2012
- D992
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Description and analysis of genetic variants in French hereditary breast and ovarian cancer families recorded in the UMD-BRCA1/BRCA2 databasesCaputo, Sandrine / Benboudjema, Louisa / Sinilnikova, Olga et al. | 2012
- D1003
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ADHDgene: a genetic database for attention deficit hyperactivity disorderZhang, Liuyan / Chang, Suhua / Li, Zhao et al. | 2012
- D1010
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ALFRED: an allele frequency resource for research and teachingRajeevan, Haseena / Soundararajan, Usha / Kidd, Judith R. et al. | 2012
- D1016
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AutismKB: an evidence-based knowledgebase of autism geneticsXu, Li-Ming / Li, Jia-Rui / Huang, Yue et al. | 2012
- D1023
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BGMUT: NCBI dbRBC database of allelic variations of genes encoding antigens of blood group systemsPatnaik, Santosh Kumar / Helmberg, Wolfgang / Blumenfeld, Olga O. et al. | 2012
- D1030
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DiseaseMeth: a human disease methylation databaseLv, Jie / Liu, Hongbo / Su, Jianzhong et al. | 2012
- D1036
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DistiLD Database: diseases and traits in linkage disequilibrium blocksPallejà, Albert / Horn, Heiko / Eliasson, Sabrina et al. | 2012
- D1041
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Dr.VIS: a database of human disease-related viral integration sitesZhao, Xin / Liu, Qi / Cai, Qingqing et al. | 2012
- D1047
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GWASdb: a database for human genetic variants identified by genome-wide association studiesLi, Mulin Jun / Wang, Panwen / Liu, Xiaorong et al. | 2012
- D1055
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SpliceDisease database: linking RNA splicing and diseaseWang, Juan / Zhang, Jie / Li, Kaibo et al. | 2012
- D1060
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GeneSigDB: a manually curated database and resource for analysis of gene expression signaturesCulhane, Aedín C. / Schröder, Markus S. / Sultana, Razvan et al. | 2012
- D1067
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GeneWeaver: a web-based system for integrative functional genomicsBaker, Erich J. / Jay, Jeremy J. / Bubier, Jason A. et al. | 2012
- D1077
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Gene Expression Atlas update--a value-added database of microarray and sequencing-based functional genomics experimentsKapushesky, Misha / Adamusiak, Tomasz / Burdett, Tony et al. | 2012
- D1082
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modMine: flexible access to modENCODE dataContrino, Sergio / Smith, Richard N. / Butano, Daniela et al. | 2012
- D1089
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RecountDB: a database of mapped and count corrected transcribed sequencesWijaya, Edward / Frith, Martin C. / Asai, Kiyoshi et al. | 2012
- D1093
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MOPED: Model Organism Protein Expression DatabaseKolker, Eugene / Higdon, Roger / Haynes, Winston et al. | 2012
- D1100
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ChEMBL: a large-scale bioactivity database for drug discoveryGaulton, Anna / Bellis, Louisa J. / Bento, A. Patricia et al. | 2012
- D1108
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DAMPD: a manually curated antimicrobial peptide databaseSeshadri Sundararajan, Vijayaraghava / Gabere, Musa Nur / Pretorius, Ashley et al. | 2012
- D1113
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SuperTarget goes quantitative: update on drug-target interactionsHecker, Nikolai / Ahmed, Jessica / von Eichborn, Joachim et al. | 2012
- D1118
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TDR Targets: a chemogenomics resource for neglected diseasesMagariños, María P. / Carmona, Santiago J. / Crowther, Gregory J. et al. | 2012
- D1128
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Therapeutic target database update 2012: a resource for facilitating target-oriented drug discoveryZhu, Feng / Shi, Zhe / Qin, Chu et al. | 2012
- D1137
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The Human OligoGenome Resource: a database of oligonucleotide capture probes for resequencing target regions across the human genomeNewburger, Daniel E. / Natsoulis, Georges / Grimes, Sue et al. | 2012
- D1144
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PrimerBank: a PCR primer database for quantitative gene expression analysis, 2012 updateWang, Xiaowei / Spandidos, Athanasia / Wang, Huajun et al. | 2012
- D1150
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HmtDB, a genomic resource for mitochondrion-based human variability studiesRubino, Francesco / Piredda, Roberta / Calabrese, Francesco Maria et al. | 2012
- D1160
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MitoMiner: a data warehouse for mitochondrial proteomics dataSmith, Anthony C. / Blackshaw, James A. / Robinson, Alan J. et al. | 2012
- D1168
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MitoZoa 2.0: a database resource and search tools for comparative and evolutionary analyses of mitochondrial genomes in MetazoaD'Onorio de Meo, Paolo / D'Antonio, Mattia / Griggio, Francesca et al. | 2012
- D1173
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MetaCrop 2.0: managing and exploring information about crop plant metabolismSchreiber, Falk / Colmsee, Christian / Czauderna, Tobias et al. | 2012
- D1178
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Phytozome: a comparative platform for green plant genomicsGoodstein, David M. / Shu, Shengqiang / Howson, Russell et al. | 2012
- D1187
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PlantNATsDB: a comprehensive database of plant natural antisense transcriptsChen, Dijun / Yuan, Chunhui / Zhang, Jian et al. | 2012
- D1194
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PLEXdb: gene expression resources for plants and plant pathogensDash, Sudhansu / Van Hemert, John / Hong, Lu et al. | 2012
- D1202
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The Arabidopsis Information Resource (TAIR): improved gene annotation and new toolsLamesch, Philippe / Berardini, Tanya Z. / Li, Donghui et al. | 2012
- D1211
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GABI-Kat SimpleSearch: new features of the Arabidopsis thaliana T-DNA mutant databaseKleinboelting, Nils / Huep, Gunnar / Kloetgen, Andreas et al. | 2012
- D1216
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Plantmetabolomics.org: mass spectrometry-based Arabidopsis metabolomics--database and tools updateBais, Preeti / Moon-Quanbeck, Stephanie M. / Nikolau, Basil J. et al. | 2012
- D1221
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LegumeIP: an integrative database for comparative genomics and transcriptomics of model legumesLi, Jun / Dai, Xinbin / Liu, Tingsong et al. | 2012
- D1230
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A database of immunoglobulins with integrated tools: DIGITChailyan, Anna / Tramontano, Anna / Marcatili, Paolo et al. | 2012
- D1235
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DNAtraffic--a new database for systems biology of DNA dynamics during the cell lifeKuchta, Krzysztof / Barszcz, Daniela / Grzesiuk, Elzbieta et al. | 2012
- D1241
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ExoCarta 2012: database of exosomal proteins, RNA and lipidsMathivanan, Suresh / Fahner, Cassie J. / Reid, Gavin E. et al. | 2012
- D1245
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MethylomeDB: a database of DNA methylation profiles of the brainXin, Yurong / Chanrion, Benjamin / O'Donnell, Anne H. et al. | 2012
- D1250
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MetaBase--the wiki-database of biological databasesBolser, Dan M. / Chibon, Pierre-Yves / Palopoli, Nicolas et al. | 2012
- D1255
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The Gene Wiki in 2011: community intelligence applied to human gene annotationGood, Benjamin M. / Clarke, Erik L. / de Alfaro, Luca et al. | 2012
- D1262
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GONUTS: the Gene Ontology Normal Usage Tracking SystemRenfro, Daniel P. / McIntosh, Brenley K. / Venkatraman, Anand et al. | 2012
- D1270
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EcoliWiki: a wiki-based community resource for Escherichia coliMcIntosh, Brenley K. / Renfro, Daniel P. / Knapp, Gwendowlyn S. et al. | 2012
- D1278
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SubtiWiki--a comprehensive community resource for the model organism Bacillus subtilisMäder, Ulrike / Schmeisky, Arne G. / Flórez, Lope A. et al. | 2012
- D1288
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Xanthusbase after five years expands to become OpenmodsPratt-Szeliga, Philip C. / Skewes, Aaron D. / Yan, Jinyuan et al. | 2012
- D1295
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959 Nematode Genomes: a semantic wiki for coordinating sequencing projectsKumar, Sujai / Schiffer, Philipp H. / Blaxter, Mark et al. | 2012
- D1301
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WikiPathways: building research communities on biological pathwaysKelder, Thomas / van Iersel, Martijn P. / Hanspers, Kristina et al. | 2012
- D1308
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SNPedia: a wiki supporting personal genome annotation, interpretation and analysisCariaso, Michael / Lennon, Greg et al. | 2012
- D1313
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The SEQanswers wiki: a wiki database of tools for high-throughput sequencing analysisLi, Jing-Woei / Robison, Keith / Martin, Marcel et al. | 2012
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Nucleic Acids Research: VOLUME 40 DATABASE ISSUE JANUARY 1, 2012| 2012
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Nucleic Acids Research - Editorial Board| 2012
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Subscriptions| 2012