Survey of Differentially Expressed Proteins and Genes in Jasmonic Acid Treated Rice Seedling Shoot and Root at the Proteomics and Transcriptomics Levels (Unknown)
- New search for: Cho, Kyoungwon
- New search for: Agrawal, Ganesh Kumar
- New search for: Shibato, Junko
- New search for: Jung, Young-Ho
- New search for: Kim, Yeon-Ki
- New search for: Nahm, Baek Hie
- New search for: Jwa, Nam-Soo
- New search for: Tamogami, Shigeru
- New search for: Han, Oksoo
- New search for: Kohda, Kimiyoshi
- New search for: Iwahashi, Hitoshi
- New search for: Rakwal, Randeep
- New search for: Cho, Kyoungwon
- New search for: Agrawal, Ganesh Kumar
- New search for: Shibato, Junko
- New search for: Jung, Young-Ho
- New search for: Kim, Yeon-Ki
- New search for: Nahm, Baek Hie
- New search for: Jwa, Nam-Soo
- New search for: Tamogami, Shigeru
- New search for: Han, Oksoo
- New search for: Kohda, Kimiyoshi
- New search for: Iwahashi, Hitoshi
- New search for: Rakwal, Randeep
In:
Journal of Proteome Research
;
6
, 9
;
3581-3603
;
2007
- Article (Journal) / Electronic Resource
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Title:Survey of Differentially Expressed Proteins and Genes in Jasmonic Acid Treated Rice Seedling Shoot and Root at the Proteomics and Transcriptomics Levels
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Additional title:J. Proteome Res.
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Contributors:Cho, Kyoungwon ( author ) / Agrawal, Ganesh Kumar ( author ) / Shibato, Junko ( author ) / Jung, Young-Ho ( author ) / Kim, Yeon-Ki ( author ) / Nahm, Baek Hie ( author ) / Jwa, Nam-Soo ( author ) / Tamogami, Shigeru ( author ) / Han, Oksoo ( author ) / Kohda, Kimiyoshi ( author )
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Published in:Journal of Proteome Research ; 6, 9 ; 3581-3603
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Publisher:
- New search for: American Chemical Society
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Publication date:2007-09-07
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ISSN:
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Coden:
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DOI:
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Type of media:Article (Journal)
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Type of material:Electronic Resource
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Language:Unknown
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Source:
Table of contents – Volume 6, Issue 9
The tables of contents are generated automatically and are based on the data records of the individual contributions available in the index of the TIB portal. The display of the Tables of Contents may therefore be incomplete.
- 3362
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It Takes a Village To Develop BiomarkersHANASH, SAM et al. | 2007
- 3363
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Currents: Automated 2DE | Proteomics screen reveals in vivo kinase targets | Identifying lipid-protein interactions | Studying protein domains to discover binding specificities | Human liver proteome analysis | Fast microarray analysis with automated image detection | TOOLbox: Simulated shotgun experiments | BioText for searching figure captions | Hardklör for high-resolution MS/MS | Data dissemination with PrestOMIC| 2007
- 3366
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Research Profile: The complex composition of embryonic CSFCottingham, Katie et al. | 2007
- 3367
-
Research Profile: The proteomics of agingWillis, Randall C et al. | 2007
- 3369
-
Proteomics Projects: HUPO Proteome Biology of Stem Cells InitiativeCottingham, Katie et al. | 2007
- 3369
-
Government & Society: New cancer center will focus on proteomics and genomicsCottingham, Katie et al. | 2007
- 3370
-
New Products| 2007
- 3371
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How Shall We Use the Proteomics Toolbox for Biomarker Discovery?Lescuyer, Pierre / Hochstrasser, Denis / Rabilloud, Thierry et al. | 2007
- 3377
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Hard (Beta-)Keratins in the Epidermis of Reptiles: Composition, Sequence, and Molecular OrganizationToni, Mattia / Dalla Valle, Luisa / Alibardi, Lorenzo et al. | 2007
- 3393
-
Improving Sample Treatment for In-Solution Protein Identification by Peptide Mass Fingerprint Using Matrix-Assisted Laser Desorption/Ionization Time-of-Flight Mass SpectrometrySantos, H. M. / Rial-Otero, R. / Fernandes, L. / Vale, G. / Rivas, M. G. / Moura, I. / Capelo, J. L. et al. | 2007
- 3400
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Muscle Metabolic Modulation by Chronic HypoxiaGosker, Harry R. / Schols, Annemie M. W. J. et al. | 2007
- 3402
-
Proteomic Analysis of Peritoneal Fluid in Women with EndometriosisFerrero, Simone / Gillott, David J. / Remorgida, Valentino / Anserini, Paola / Leung, Kit-Yi / Ragni, Nicola / Grudzinskas, Jurgis G. et al. | 2007
- 3412
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Informatics Strategies for Large-Scale Novel Cross-Linking AnalysisAnderson, Gordon A. / Tolic, Nikola / Tang, Xiaoting / Zheng, Chunxiang / Bruce, James E. et al. | 2007
- 3422
-
The Optimization of Protocols for Proteome Difference Gel Electrophoresis (DiGE) Analysis of Preneoplastic SkinHannigan, Adele / Burchmore, Richard / Wilson, Joanna B. et al. | 2007
- 3433
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Proteomic Studies of PP2A-B56γ1 Phosphatase Complexes Reveal Phosphorylation-Regulated Partners in Cardiac Local SignalingZhou, Xing Wang / Mudannayake, Malkanthi / Green, Mariah / Gigena, Marisa S. / Wang, Guanghui / Shen, Rong-Fong / Rogers, Terry B. et al. | 2007
- 3433
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Proteomic Studies of PP2A-B56gamma1 Phosphatase Complexes Reveal Phosphorylation-Regulated Partners in Cardiac Local SignalingZhou, X. W. / Mudannayake, M. / Green, M. / Gigena, M. S. / Wang, G. / Shen, R.-F. / Rogers, T. B. et al. | 2007
- 3443
-
On the Predictability of Protein Database Search Complexity and Its Relevance to Optimization of Distributed SearchesDeciu, Cosmin / Sun, Jun / Wall, Mark A. et al. | 2007
- 3449
-
Metabolic Regulatory Network Alterations in Response to Acute Cold Stress and Ginsenoside InterventionWang, Xiaoyan / Su, Mingming / Qiu, Yunping / Ni, Yan / Zhao, Tie / Zhou, Mingmei / Zhao, Aihua / Yang, Shengli / Zhao, Liping / Jia, Wei et al. | 2007
- 3456
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An Inflammatory Arthritis-Associated Metabolite Biomarker Pattern Revealed by 1H NMR SpectroscopyWeljie, Aalim M. / Dowlatabadi, Reza / Miller, B. Joan / Vogel, Hans J. / Jirik, Frank R. et al. | 2007
- 3465
-
Exploring Novel Function of Yeast Ssa1/2p by Quantitative Profiling Proteomics Using NanoESI-LC−MS/MSMatsumoto, Rena / Nam, Hyung Wook / Agrawal, Ganesh Kumar / Kim, Yu Sam / Iwahashi, Hitoshi / Rakwal, Randeep et al. | 2007
- 3475
-
Comparative Profiling of Serum Glycoproteome by Sequential Purification of Glycoproteins and 2-Nitrobenzenesulfenyl (NBS) Stable Isotope Labeling: A New Approach for the Novel Biomarker Discovery for CancerUeda, Koji / Katagiri, Toyomasa / Shimada, Takashi / Irie, Shinji / Sato, Taka-Aki / Nakamura, Yusuke / Daigo, Yataro et al. | 2007
- 3475
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Comparative Profiling of Serum Glycoproteome by Sequential Purification of Glycoproteins and 2-Nitrobenzensulfenyl (NBS) Stable Isotope Labeling: A New Approach for the Novel Biomarker Discovery for CancerUeda, K. et al. | 2007
- 3484
-
Proteome Cataloging and Relative Quantification of Francisella tularensis tularensis Strain Schu4 in 2D PAGE Using Preparative Isoelectric FocusingWaldo, Robert H. / Cummings, Edwin D. / Sarva, Siva T. / Brown, Janet M. / Lauriano, Crystal M. / Rose, Lorne A. / Belland, Robert J. / Klose, Karl E. / Hilliard, George M. et al. | 2007
- 3491
-
14-3-3 Expression in Denervated Hippocampus after Entorhinal Cortex Lesion Assessed by Culture-Derived Isotope Tags in Quantitative ProteomicsSihlbom, Carina / Wilhelmsson, Ulrika / Li, Lizhen / Nilsson, Carol L. / Pekny, Milos et al. | 2007
- 3501
-
An Automated Platform for Analysis of Phosphoproteomic Datasets: Application to Kidney Collecting Duct PhosphoproteinsHoffert, Jason D. / Wang, Guanghui / Pisitkun, Trairak / Shen, Rong-Fong / Knepper, Mark A. et al. | 2007
- 3509
-
Proteomic Analysis of a Membrane Skeleton Fraction from Human LiverHe, Jintang / Liu, Yashu / He, Sizhi / Wang, Qingsong / Pu, Hai / Ji, Jianguo et al. | 2007
- 3519
-
Dehydration Propensity of Order−Disorder Intermediate Regions in Soluble ProteinsPietrosemoli, Natalia / Crespo, Alejandro / Fernández, Ariel et al. | 2007
- 3527
-
Design of Recombinant Antibody Microarrays for Serum Protein Profiling: Targeting of Complement ProteinsIngvarsson, Johan / Larsson, Anette / Sjöholm, Anders G. / Truedsson, Lennart / Jansson, Bo / Borrebaeck, Carl A. K. / Wingren, Christer et al. | 2007
- 3537
-
A Comparative Proteomic Analysis of Human and Rat Embryonic Cerebrospinal FluidZappaterra, Mauro D. / Lisgo, Steven N. / Lindsay, Susan / Gygi, Steven P. / Walsh, Christopher A. / Ballif, Bryan A. et al. | 2007
- 3549
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Proteomic Parsimony through Bipartite Graph Analysis Improves Accuracy and TransparencyZhang, Bing / Chambers, Matthew C. / Tabb, David L. et al. | 2007
- 3558
-
Contribution of Protein Fractionation to Depth of Analysis of the Serum and Plasma ProteomesFaca, Vitor / Pitteri, Sharon J. / Newcomb, Lisa / Glukhova, Veronika / Phanstiel, Doug / Krasnoselsky, Alexei / Zhang, Qing / Struthers, Jason / Wang, Hong / Eng, Jimmy et al. | 2007
- 3566
-
Proteomic Analysis of Cell Envelope from Staphylococcus xylosus C2a, a Coagulase-Negative StaphylococcusPlanchon, Stella / Chambon, Christophe / Desvaux, Mickaël / Chafsey, Ingrid / Leroy, Sabine / Talon, Régine / Hébraud, Michel et al. | 2007
- 3581
-
Survey of Differentially Expressed Proteins and Genes in Jasmonic Acid Treated Rice Seedling Shoot and Root at the Proteomics and Transcriptomics LevelsCho, Kyoungwon / Agrawal, Ganesh Kumar / Shibato, Junko / Jung, Young-Ho / Kim, Yeon-Ki / Nahm, Baek Hie / Jwa, Nam-Soo / Tamogami, Shigeru / Han, Oksoo / Kohda, Kimiyoshi et al. | 2007
- 3604
-
Amphibian Skin Secretomics: Application of Parallel Quadrupole Time-of-Flight Mass Spectrometry and Peptide Precursor cDNA Cloning to Rapidly Characterize the Skin Secretory Peptidome of Phyllomedusa hypochondrialis azurea: Discovery of a Novel Peptide Family, the HyposinsThompson, Alan Hunter / Bjourson, Anthony John / Orr, David Francis / Shaw, Chris / McClean, Stephen et al. | 2007
- 3614
-
Identification of Proteins Involved in Microglial Endocytosis of alpha-SynucleinLiu, J. / Zhou, Y. / Wang, Y. / Fong, H. / Murray, T. M. / Zhang, J. et al. | 2007
- 3614
-
Identification of Proteins Involved in Microglial Endocytosis of α-SynucleinLiu, Jun / Zhou, Yong / Wang, Yan / Fong, Hanson / Murray, Thomas M. / Zhang, Jing et al. | 2007
- 3628
-
Identification and Antibody-Therapeutic Targeting of Chloramphenicol-Resistant Outer Membrane Proteins in Escherichia coliLi, Hui / Lin, Xiang-min / Wang, San-ying / Peng, Xuan-xian et al. | 2007
- 3637
-
Examining the Proteome of Drosophila Across Organism LifespanSowell, Renã A. / Hersberger, Katherine E. / Kaufman, Thomas C. / Clemmer, David E. et al. | 2007
- 3648
-
Fesselin is a Natively Unfolded ProteinKhaymina, Svetlana S. / Kenney, John M. / Schroeter, Mechthild M. / Chalovich, Joseph M. et al. | 2007
- 3655
-
Characterization of Post-Translational Modifications of Histone H2B-Variants Isolated from Arabidopsis thalianaBergmüller, Eveline / Gehrig, Peter M. / Gruissem, Wilhelm et al. | 2007
- 3669
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Serum Proteome of Leprosy Patients Undergoing Erythema Nodosum Leprosum Reaction: Regulation of Expression of the Isoforms of HaptoglobinGupta, Nishma / Shankernarayan, Nallakandy P. / Dharmalingam, Kuppamuthu et al. | 2007
- 3680
-
In-Depth Proteomic Profiling of the Normal Human Kidney Glomerulus Using Two-Dimensional Protein Prefractionation in Combination with Liquid Chromatography-Tandem Mass SpectrometryMiyamoto, Masahito / Yoshida, Yutaka / Taguchi, Izumi / Nagasaka, Yoshimi / Tasaki, Masayuki / Zhang, Ying / Xu, Bo / Nameta, Masaaki / Sezaki, Hiroshi / Cuellar, Lino M. et al. | 2007
- 3691
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Intestinal Epithelial Cell Proteome in IL-10 Deficient Mice and IL-10 Receptor Reconstituted Epithelial Cells: Impact on Chronic InflammationWerner, Tanja / Shkoda, Anna / Haller, Dirk et al. | 2007
- 3705
-
Bioinformatics Processing of Protein and Transcript Profiles of Normal and Transformed Cell Lines Indicates Functional Impairment of Transcriptional Regulators in Buccal CarcinomaStaab, Claudia A. / Ceder, Rebecca / Jägerbrink, Theres / Nilsson, Jan-Anders / Roberg, Karin / Jörnvall, Hans / Höög, Jan-Olov / Grafström, Roland C. et al. | 2007
- 3718
-
Proteomic and Biochemical Studies of Calcium- and Phosphorylation-Dependent Calmodulin Complexes in Mammalian CellsJang, Deok-Jin / Guo, Mingquan / Wang, Daojing et al. | 2007
- 3729
-
Lifetime Proteomic Profiling of an A30P α-Synuclein Drosophila Model of Parkinson's DiseaseXun, Zhiyin / Sowell, Renã A. / Kaufman, Thomas C. / Clemmer, David E. et al. | 2007
- 3729
-
Lifetime Proteomic Profiling of an A30P alpha-Synuclein Drosophila Model of Parkinson's DiseaseXun, Z. / Sowell, R. A. / Kaufman, T. C. / Clemmer, D. E. et al. | 2007
- 3739
-
Assessment Approach for Evaluating High Abundance Protein Depletion Methods for Cerebrospinal Fluid (CSF) Proteomic AnalysisShores, Kevin S. / Knapp, Daniel R. et al. | 2007
- 3752
-
Proteomic Analysis of Peripheral Blood Mononuclear Cells: Selective Protein Processing Observed in Patients with Rheumatoid ArthritisSchulz, Martin / Dotzlaw, Helmut / Mikkat, Stefan / Eggert, Martin / Neeck, Gunther et al. | 2007
- 3760
-
Evaluation of Tubulointerstitial Lesions' Severity in Patients with Glomerulonephritides: An NMR-Based Metabonomic StudyPsihogios, Nikolaos G. / Kalaitzidis, Rigas G. / Dimou, Sofia / Seferiadis, Konstantin I. / Siamopoulos, Kostas C. / Bairaktari, Eleni T. et al. | 2007
- 3771
-
The Glycine max Xylem Sap and Apoplast ProteomeDjordjevic, Michael A. / Oakes, Marie / Li, Dong Xue / Hwang, Cheol Ho / Hocart, Charles H. / Gresshoff, Peter M. et al. | 2007
- 3780
-
Microscale Solution Isoelectric Focusing as an Effective Strategy Enabling Containment of Hemeoglobin-Derived Products for High-Resolution Gel-Based Analysis of the Plasmodium falciparum ProteomeNirmalan, Niroshini / Flett, Fiona / Skinner, Tom / Hyde, John E. / Sims, Paul F. G. et al. | 2007
- 3788
-
Statistically Inferring Protein−Protein Associations with Affinity Isolation LC−MS/MS AssaysSharp, Julia L. / Anderson, Kevin K. / Hurst, Gregory B. / Daly, Don S. / Pelletier, Dale A. / Cannon, William R. / Auberry, Deanna L. / Schmoyer, Denise D. / Hayes McDonald, W. / White, Amanda M. et al. | 2007
- 3796
-
Identification of Potential Pluripotency Determinants for Human Embryonic Stem Cells Following Proteomic Analysis of Human and Mouse Fibroblast Conditioned MediaProwse, Andrew B. J. / McQuade, Leon R. / Bryant, Katherine J. / Marcal, Helder / Gray, Peter P. et al. | 2007
- 3808
-
Subcellular Proteome Analysis of Camptothecin Analogue NSC606985-Treated Acute Myeloid Leukemic CellsYu, Yun / Wang, Li-Shun / Shen, Shao-Ming / Xia, Li / Zhang, Lei / Zhu, Yuan-Shan / Chen, Guo-Qiang et al. | 2007
- 3819
-
Reliable Detection of Deamidated Peptides from Lens Crystallin Proteins Using Changes in Reversed-Phase Elution Times and Parent Ion MassesDasari, Surendra / Wilmarth, Phillip A. / Rustvold, D. Leif / Riviere, Michael A. / Nagalla, Srinivasa R. / David, Larry L. et al. | 2007
- 3827
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Selective Enrichment of Tryptophan-Containing Peptides from Protein Digests Employing a Reversible Derivatization with Malondialdehyde and Solid-Phase Capture on Hydrazide BeadsFoettinger, Alexandra / Leitner, Alexander / Lindner, Wolfgang et al. | 2007
- 3835
-
Selective Modification of Trp19 in beta-Lactoglobulin by a New Diazo Fluorescence ProbeBao, Z. / Wang, S. / Shi, W. / Dong, S. / Ma, H. et al. | 2007
- 3835
-
Selective Modification of Trp19 in β-Lactoglobulin by a New Diazo Fluorescence ProbeBao, Zhijuan / Wang, Shujuan / Shi, Wen / Dong, Suying / Ma, Huimin et al. | 2007
- 3842
-
Metal-Chelating Plastic MALDI (pMALDI) Chips for the Enhancement of Phosphorylated-Peptide/Protein SignalsIbáñez, Alfredo J. / Muck, Alexander / Svatoš, Aleš et al. | 2007
- 3849
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Immobilization of Trypsin on Superparamagnetic Nanoparticles for Rapid and Effective ProteolysisLi, Yan / Xu, Xiuqing / Deng, Chunhui / Yang, Pengyuan / Zhang, Xiangmin et al. | 2007