The Collaboratory for MS3D: A New Cyberinfrastructure for the Structural Elucidation of Biological Macromolecules and Their Assemblies Using Mass Spectrometry-Based Approaches (Unknown)
- New search for: Yu, Eizadora T.
- New search for: Hawkins, Arie
- New search for: Kuntz, Irwin D.
- New search for: Rahn, Larry A.
- New search for: Rothfuss, Andrew
- New search for: Sale, Kenneth
- New search for: Young, Malin M.
- New search for: Yang, Christine L.
- New search for: Pancerella, Carmen M.
- New search for: Fabris, Daniele
- New search for: Yu, Eizadora T.
- New search for: Hawkins, Arie
- New search for: Kuntz, Irwin D.
- New search for: Rahn, Larry A.
- New search for: Rothfuss, Andrew
- New search for: Sale, Kenneth
- New search for: Young, Malin M.
- New search for: Yang, Christine L.
- New search for: Pancerella, Carmen M.
- New search for: Fabris, Daniele
In:
Journal of Proteome Research
;
7
, 11
;
4848-4857
;
2008
- Article (Journal) / Electronic Resource
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Title:The Collaboratory for MS3D: A New Cyberinfrastructure for the Structural Elucidation of Biological Macromolecules and Their Assemblies Using Mass Spectrometry-Based Approaches
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Additional title:MS3D Cyberinfrastructure
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Contributors:Yu, Eizadora T. ( author ) / Hawkins, Arie ( author ) / Kuntz, Irwin D. ( author ) / Rahn, Larry A. ( author ) / Rothfuss, Andrew ( author ) / Sale, Kenneth ( author ) / Young, Malin M. ( author ) / Yang, Christine L. ( author ) / Pancerella, Carmen M. ( author ) / Fabris, Daniele ( author )
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Published in:Journal of Proteome Research ; 7, 11 ; 4848-4857
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Publisher:
- New search for: American Chemical Society
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Publication date:2008-11-07
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ISSN:
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Coden:
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DOI:
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Type of media:Article (Journal)
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Type of material:Electronic Resource
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Language:Unknown
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Keywords:
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Source:
Table of contents – Volume 7, Issue 11
The tables of contents are generated automatically and are based on the data records of the individual contributions available in the index of the TIB portal. The display of the Tables of Contents may therefore be incomplete.
- 4609
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International Summit on Proteomics Data Release and Sharing PolicyRodriguez, Henry et al. | 2008
- 4610
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Neuropeptidomics study profiles hypothalamic “nucleus”, individual cellsPerkel, Jeffrey M. et al. | 2008
- 4611
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How does the mammary gland proteome change during puberty?Cottingham, Katie et al. | 2008
- 4612
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Proteomics researchers now agree on some aspects of data sharingCottingham, Katie et al. | 2008
- 4613
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Calendar| 2008
- 4614
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A Spectral Clustering Approach to MS/MS Identification of Post-Translational ModificationsFalkner, Jayson A. / Falkner, Jarret W. / Yocum, Anastasia K. / Andrews, Philip C. et al. | 2008
- 4623
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Comparative Proteomic Analysis Provides New Insights into the Fiber Elongating Process in CottonYang, Yi-Wei / Bian, Shao-Min / Yao, Yuan / Liu, Jin-Yuan et al. | 2008
- 4638
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2D Difference Gel Electrophoresis of Prepubertal and Pubertal Rat Mammary Gland ProteomesKim, Helen / Cope, Mark B. / Herring, Richie / Robinson, Gloria / Wilson, Landon / Page, Grier P. / Barnes, Stephen et al. | 2008
- 4651
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Activated Epidermal Growth Factor Receptor as a Novel Target in Pancreatic Cancer TherapyHarsha, H. C. / Jimeno, Antonio / Molina, Henrik / Mihalas, Anca B. / Goggins, Michael G. / Hruban, Ralph H. / Schulick, Richard D. / Kamath, Ullas / Maitra, Anirban / Hidalgo, Manuel et al. | 2008
- 4659
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Impact of rpoS Deletion on the Proteome of Escherichia coli Grown Planktonically and as BiofilmCollet, Anthony / Cosette, Pascal / Beloin, Christophe / Ghigo, Jean-Marc / Rihouey, Christophe / Lerouge, Patrice / Junter, Guy-Alain / Jouenne, Thierry et al. | 2008
- 4670
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Differential Membrane Proteomics Using 18O-Labeling To Identify Biomarkers for CholangiocarcinomaKristiansen, Troels Zakarias / Harsha, H. C. / Grønborg, Mads / Maitra, Anirban / Pandey, Akhilesh et al. | 2008
- 4678
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Distinction between Human Cytochrome P450 (CYP) Isoforms and Identification of New Phosphorylation Sites by Mass SpectrometryRedlich, Gorden / Zanger, Ulrich M. / Riedmaier, Stephan / Bache, Nicolai / Giessing, Anders B. M. / Eisenacher, Martin / Stephan, Christian / Meyer, Helmut E. / Jensen, Ole N. / Marcus, Katrin et al. | 2008
- 4689
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Proteomic Analysis of Calcium Oxalate Monohydrate Crystal-Induced Cytotoxicity in Distal Renal Tubular CellsThongboonkerd, Visith / Semangoen, Theptida / Sinchaikul, Supachok / Chen, Shui-Tein et al. | 2008
- 4701
-
Differential Proteomic Screen To Evidence Proteins Ubiquitinated upon Mitotic Exit in Cell-Free Extract of Xenopus laevis EmbryosBazile, Franck / Gagné, Jean-Philippe / Mercier, Geneviève / Lo, Ken Sin / Pascal, Aude / Vasilescu, Julian / Figeys, Daniel / Poirier, Guy G. / Kubiak, Jacek Z. / Chesnel, Franck et al. | 2008
- 4715
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Screening for EphB Signaling Effectors Using SILAC with a Linear Ion Trap-Orbitrap Mass SpectrometerZhang, Guoan / Fenyö, David / Neubert, Thomas A. et al. | 2008
- 4727
-
Lamin A Ser404 Is a Nuclear Target of Akt Phosphorylation in C2C12 CellsCenni, Vittoria / Bertacchini, Jessika / Beretti, Francesca / Lattanzi, Giovanna / Bavelloni, Alberto / Riccio, Massimo / Ruzzene, Maria / Marin, Oriano / Arrigoni, Giorgio / Parnaik, Veena et al. | 2008
- 4736
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Studying Protein Phosphorylation in Low MW CSF Fractions with capLC−ICPMS and nanoLC−CHIP-ITMS for Identification of PhosphoproteinsEllis, Jenny / Grimm, Rudolf / Clark, Joseph F. / Pyne-Gaithman, Gail / Wilbur, Steve / Caruso, Joseph A. et al. | 2008
- 4743
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Quantitative Analysis of Brain Nuclear Phosphoproteins Identifies Developmentally Regulated Phosphorylation EventsLiao, Lujian / McClatchy, Daniel B. / Park, Sung Kyu / Xu, Tao / Lu, Bingwen / Yates, John R. et al. | 2008
- 4756
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The Impact of Peptide Abundance and Dynamic Range on Stable-Isotope-Based Quantitative Proteomic AnalysesBakalarski, Corey E. / Elias, Joshua E. / Villén, Judit / Haas, Wilhelm / Gerber, Scott A. / Everley, Patrick A. / Gygi, Steven P. et al. | 2008
- 4766
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The Proteomic Response of Saccharomyces cerevisiae in Very High Glucose Conditions with Amino Acid SupplementationPham, Trong Khoa / Wright, Phillip C. et al. | 2008
- 4775
-
Transcriptomic and Metabonomic Profilling of Obesity-Prone and Obesity-Resistant Rats under High Fat DietLi, H. / Xie, Z. / Lin, J. / Song, H. / Wang, Q. / Wang, K. / Su, M. / Qiu, Y. / Zhao, T. / Song, K. et al. | 2008
- 4775
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Transcriptomic and Metabonomic Profiling of Obesity-Prone and Obesity-Resistant Rats under High Fat DietLi, Houkai / Xie, Zuoquan / Lin, Jingchao / Song, Huaiguang / Wang, Qi / Wang, Ke / Su, Mingming / Qiu, Yunping / Zhao, Tie / Song, Kai et al. | 2008
- 4784
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Proteome Analysis of Multidrug Resistance of Human Oral Squamous Carcinoma Cells Using CD147 SilencingKuang, Ye-Hong / Chen, Xiang / Su, Juan / Wu, Li-Sha / Li, Ji / Chang, Jing / Qiu, Ying / Chen, Zhe-Sheng / Kanekura, Takuro et al. | 2008
- 4792
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Differential Proteome Expression Associated with Urokinase Plasminogen Activator Receptor (uPAR) Suppression in Malignant Epithelial CancerSaldanha, Rohit G. / Xu, Ning / Molloy, Mark P. / Veal, Duncan A. / Baker, Mark S. et al. | 2008
- 4807
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Discovery, Identification, and Characterization of Candidate Pharmacodynamic Markers of Methionine Aminopeptidase-2 InhibitionWarder, Scott E. / Tucker, Lora A. / McLoughlin, Shaun M. / Strelitzer, Tamara J. / Meuth, Joseph L. / Zhang, Qian / Sheppard, George S. / Richardson, Paul L. / Lesniewski, Rick / Davidsen, Steven K. et al. | 2008
- 4821
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Protein Expression Profile of the Mouse Metaphase-II OocyteMa, Minyue / Guo, Xuejiang / Wang, Fuqiang / Zhao, Chun / Liu, Zichuan / Shi, Zhonghua / Wang, Yufeng / Zhang, Ping / Zhang, Kemei / Wang, Ningling et al. | 2008
- 4831
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Hybridization of Pulsed-Q Dissociation and Collision-Activated Dissociation in Linear Ion Trap Mass Spectrometer for iTRAQ QuantitationGuo, Tiannan / Gan, Chee Sian / Zhang, Huoming / Zhu, Yi / Kon, Oi Lian / Sze, Siu Kwan et al. | 2008
- 4841
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The Rate of False Positive Sequence Matches of Peptides Profiled by MALDI MS and Identified by MS/MSStoop, Marcel P. / Lamers, Robert-Jan A. N. / Burgers, Peter C. / Sillevis Smitt, Peter A. E. / Hintzen, Rogier Q. / Luider, Theo M. et al. | 2008
- 4848
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The Collaboratory for MS3D: A New Cyberinfrastructure for the Structural Elucidation of Biological Macromolecules and Their Assemblies Using Mass Spectrometry-Based ApproachesYu, Eizadora T. / Hawkins, Arie / Kuntz, Irwin D. / Rahn, Larry A. / Rothfuss, Andrew / Sale, Kenneth / Young, Malin M. / Yang, Christine L. / Pancerella, Carmen M. / Fabris, Daniele et al. | 2008
- 4858
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Proteome Analysis of Potato under Salt StressAghaei, Keyvan / Ehsanpour, Ali Akbar / Komatsu, Setsuko et al. | 2008
- 4869
-
A Comparative Study of Electrostatic Repulsion-Hydrophilic Interaction Chromatography (ERLIC) versus SCX-IMAC-Based Methods for Phosphopeptide Isolation/EnrichmentGan, Chee Sian / Guo, Tiannan / Zhang, Huoming / Lim, Sai Kiang / Sze, Siu Kwan et al. | 2008
- 4878
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Adaptive Discriminant Function Analysis and Reranking of MS/MS Database Search Results for Improved Peptide Identification in Shotgun ProteomicsDing, Ying / Choi, Hyungwon / Nesvizhskii, Alexey I. et al. | 2008
- 4890
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Different Residues in Channel Turret Determining the Selectivity of ADWX-1 Inhibitor Peptide between Kv1.1 and Kv1.3 ChannelsYin, Shi-Jin / Jiang, Ling / Yi, Hong / Han, Song / Yang, Dai-Wen / Liu, Mai-Li / Liu, Hui / Cao, Zhi-Jian / Wu, Ying-Liang / Li, Wen-Xin et al. | 2008
- 4898
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Enhanced Capacity of Antigen Presentation of HBc-VLP-Pulsed RAW264.7 Cells Revealed by Proteomics AnalysisYang, Fu / Wang, Fang / Guo, Yingjun / Zhou, Qi / Wang, Yue / Yin, Yixuan / Sun, Shuhan et al. | 2008
- 4904
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Proteomic Analysis of the Hyaloid Vascular System Regression during Ocular DevelopmentAlbè, Elena / Chang, Jin-Hong / Azar, Nathalie F. / Ivanov, Alexander R. / Azar, Dimitri T. et al. | 2008
- 4914
-
Characterization of the Human COP9 Signalosome Complex Using Affinity Purification and Mass SpectrometryFang, Lei / Wang, Xiaorong / Yamoah, Kosj / Chen, Phang-lang / Pan, Zhen-Qiang / Huang, Lan et al. | 2008
- 4926
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Proteomic Comparison between Two Marine Snail Ecotypes Reveals Details about the Biochemistry of AdaptationMartínez-Fernández, Mónica / Rodríguez-Piñeiro, Ana M. / Oliveira, Eliandre / Páez de la Cadena, María / Rolán-Alvarez, Emilio et al. | 2008
- 4935
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Body Cooling Causes Normalization of Cardiac Protein Expression and Function in a Rat Heatstroke ModelCheng, Bor-Chih / Chang, Ching-Ping / Tsay, Yeou-Guang / Wu, Ting-Feng / Hsu, Chiung-Yueh / Lin, Mao-Tsun et al. | 2008
- 4946
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Genome-Based Analysis of Heme Biosynthesis and Uptake in Prokaryotic SystemsCavallaro, Gabriele / Decaria, Leonardo / Rosato, Antonio et al. | 2008
- 4955
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Proteomic Analysis of Oxidative Stress-Responsive Proteins in Human Pneumocytes: Insight into the Regulation of DJ-1 ExpressionDuan, Xunbao / Kelsen, Steven G. / Merali, Salim et al. | 2008
- 4962
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The Tandem PDZ Protein Syntenin Interacts with the Aminoacyl tRNA Synthetase Complex in a Lysyl-tRNA Synthetase-Dependent MannerMeerschaert, Kris / Remue, Eline / De Ganck, Ariane / Staes, An / Boucherie, Ciska / Gevaert, Kris / Vandekerckhove, Joël / Kleiman, Lawrence / Gettemans, Jan et al. | 2008
- 4974
-
A Combination of Immobilised pH Gradients Improves Membrane ProteomicsChick, J. M. / Haynes, P. A. / Bjellqvist, B. / Baker, M. S. et al. | 2008
- 4982
-
RPLC-Ion-Trap-FTMS Method for Lipid Profiling of Plasma: Method Validation and Application to p53 Mutant Mouse ModelHu, Chunxiu / van Dommelen, Judith / van der Heijden, Rob / Spijksma, Gerwin / Reijmers, Theo H. / Wang, Mei / Slee, Elizabeth / Lu, Xin / Xu, Guowang / van der Greef, Jan et al. | 2008
- 4992
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Neuropeptidomics of the Supraoptic Rat NucleusBora, Adriana / Annangudi, Suresh P. / Millet, Larry J. / Rubakhin, Stanislav S. / Forbes, Andrew J. / Kelleher, Neil L. / Gillette, Martha U. / Sweedler, Jonathan V. et al. | 2008
- 5004
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Proteomic Analysis of Left Ventricular Remodeling in an Experimental Model of Heart FailureCieniewski-Bernard, Caroline / Mulder, Paul / Henry, Jean-Paul / Drobecq, Hervé / Dubois, Emilie / Pottiez, Gwënaël / Thuillez, Christian / Amouyel, Philippe / Richard, Vincent / Pinet, Florence et al. | 2008
- 5017
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Analysis of the Human Casein Phosphoproteome by 2-D Electrophoresis and MALDI-TOF/TOF MS Reveals New PhosphoformsPoth, Aaron G. / Deeth, Hilton C. / Alewood, Paul F. / Holland, John W. et al. | 2008
- 5028
-
Detergent-Based but Gel-Free Method Allows Identification of Several Hundred Membrane Proteins in Single LC-MS RunsNagaraj, Nagarjuna / Lu, Aiping / Mann, Matthias / Wiśniewski, Jacek R. et al. | 2008
- 5033
-
Shotgun Proteomics of the Haloarchaeon Haloferax volcaniiKirkland, P. Aaron / Humbard, Matthew A. / Daniels, Charles J. / Maupin-Furlow, Julie A. et al. | 2008
- 5040
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Estrogen Regulation of Proteins in the Rat Ventromedial Nucleus of the Hypothalamusxref rid="afn1"->Mo, Bing et al. | 2008
- 5040
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Estrogen Regulation of Proteins in the Rat Ventromedial Nucleus of the HypothalamusMo, Bing / Callegari, Eduardo / Telefont, Martin / Renner, Kenneth J. et al. | 2008
- 5049
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Efficient Chymotryptic Proteolysis Enhanced by Infrared Radiation for Peptide MappingWang, Sheng / Liu, Ting / Zhang, Luyan / Chen, Gang et al. | 2008
- 5055
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High Quality Catalog of Proteotypic Peptides from Human HeartKline, Kelli G. / Frewen, Barbara / Bristow, Michael R. / MacCoss, Michael J. / Wu, Christine C. et al. | 2008
- 5062
-
An Optimized MALDI Mass Spectrometry Method for Improved Detection of Lysine/Arginine/Histidine Free PeptidesArgentini, Manuela / Strub, Jean-Marc / Carapito, Christine / Sanglier, Sarah / Van-Dorsselaer, Alain et al. | 2008