Effective correction of experimental errors in quantitative proteomics using stable isotope labeling by amino acids in cell culture (SILAC) (English)
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In:
Journal of Proteomics
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75
, 12
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3720-3732
;
2012
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ISSN:
- Article (Journal) / Electronic Resource
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Title:Effective correction of experimental errors in quantitative proteomics using stable isotope labeling by amino acids in cell culture (SILAC)
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Contributors:Park, Sung-Soo ( author ) / Wu, Wells W. ( author ) / Zhou, Yu ( author ) / Shen, Rong-Fong ( author ) / Martin, Bronwen ( author ) / Maudsley, Stuart ( author )
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Published in:Journal of Proteomics ; 75, 12 ; 3720-3732
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Publisher:
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Publication date:2012-04-24
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Size:13 pages
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ISSN:
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DOI:
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Type of media:Article (Journal)
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Type of material:Electronic Resource
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Language:English
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Keywords:
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Source:
Table of contents – Volume 75, Issue 12
The tables of contents are generated automatically and are based on the data records of the individual contributions available in the index of the TIB portal. The display of the Tables of Contents may therefore be incomplete.
- 3381
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Special Issue “Genome Regulation”PhD Kussmann, Martin / PhD Affolter, Michael / PhD Panchaud, Alexandre et al. | 2012
- 3386
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MALDI-TOF mass spectrometry screening of cholelithiasis risk markers in the gene of HNF1alphaRichter, Dominique / Harsch, Simone / Strohmeyer, André / Hirobe-Jahn, Satoko / Schimmel, Silke / Renner, Olga / Müller, Oliver / Schäffeler, Elke / Kratzer, Wolfgang / Schwab, Matthias et al. | 2012
- 3400
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Phenotypic diversity and epigenomic variation – The utility of mass spectrometric analysis of DNA methylationMcLean, Cameron / Gluckman, Peter / Sheppard, Allan et al. | 2012
- 3410
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Epigenetic regulation of ABCG2 gene is associated with susceptibility to xenobiotic exposureBabu, Kavitha / Zhang, Jinbi / Moloney, Stephanie / Pleasants, Tony / McLean, Cameron A. / Phua, Sin H. / Sheppard, Allan M. et al. | 2012
- 3419
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Proteomics in chromatin biology and epigenetics: Elucidation of post-translational modifications of histone proteins by mass spectrometrySidoli, Simone / Cheng, Lei / Jensen, Ole N. et al. | 2011
- 3434
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Mass spectrometry in the biology of RNA and its modificationsGiessing, Anders M.B. / Kirpekar, Finn et al. | 2012
- 3450
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Global identification of transfer RNAs by liquid chromatography–mass spectrometry (LC–MS)Wetzel, Collin / Limbach, Patrick A. et al. | 2011
- 3465
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Phosphotyrosine mediated protein interactions of the discoidin domain receptor 1Lemeer, Simone / Bluwstein, Andrej / Wu, Zhixiang / Leberfinger, Julia / Müller, Konrad / Kramer, Karl / Kuster, Bernhard et al. | 2011
- 3478
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Investigation of protein–RNA interactions by mass spectrometry—Techniques and applicationsSchmidt, Carla / Kramer, Katharina / Urlaub, Henning et al. | 2012
- 3495
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Targeted proteome investigation via selected reaction monitoring mass spectrometryMaiolica, Alessio / Jünger, Martin A. / Ezkurdia, Iakes / Aebersold, Ruedi et al. | 2012
- 3514
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The use of multiplexed MRM for the discovery of biomarkers to differentiate iron-deficiency anemia from anemia of inflammationDomanski, Dominik / Cohen Freue, Gabriela V. / Sojo, Luis / Kuzyk, Michael A. / Ratkay, Leslie / Parker, Carol E. / Goldberg, Y. Paul / Borchers, Christoph H. et al. | 2011
- 3529
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Multiplexed quantification of 63 proteins in human urine by multiple reaction monitoring-based mass spectrometry for discovery of potential bladder cancer biomarkersChen, Yi-Ting / Chen, Hsiao-Wei / Domanski, Dominik / Smith, Derek S. / Liang, Kung-Hao / Wu, Chih-Ching / Chen, Chien-Lun / Chung, Ting / Chen, Min-Chi / Chang, Yu-Sun et al. | 2011
- 3546
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Mass spectrometry for nutritional peptidomics: How to analyze food bioactives and their health effectsPanchaud, Alexandre / Affolter, Michael / Kussmann, Martin et al. | 2011
- 3560
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Quantitative proteomic analysis of human osteoblast-like MG-63 cells in response to bioinert implant material titanium and polyetheretherketoneZhao, Minzhi / An, Mingrui / Wang, Qingsong / Liu, Xiaochen / Lai, Wenjia / Zhao, Xuyang / Wei, Shicheng / Ji, Jianguo et al. | 2012
- 3574
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Proteomic analysis of microvesicles from plasma of healthy donors reveals high individual variabilityBastos-Amador, Patricia / Royo, Felix / Gonzalez, Esperanza / Conde-Vancells, Javier / Palomo-Diez, Laura / Borras, Francesc E. / Falcon-Perez, Juan M. et al. | 2012
- 3585
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Accounting for biological variation in differential display two-dimensional electrophoresis experimentsValcu, Cristina-Maria / Reger, Katharina / Ebner, Johanna / Görlach, Agnes et al. | 2012
- 3592
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Concentration-dependent effects of the soy phytoestrogen genistein on the proteome of cultured cardiomyocytesSun, Zeyu / Biela, Laurie M. / Hamilton, Karyn L. / Reardon, Kenneth F. et al. | 2012
- 3605
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Tyrosine-dependent capture of CAP-Gly domain‐containing proteins in complex mixture by EB1 C-terminal peptidic probesCalligaris, David / Manatschal, Cristina / Marcellin, Marlène / Villard, Claude / Monsarrat, Bernard / Burlet-Schiltz, Odile / Steinmetz, Michel O. / Braguer, Diane / Lafitte, Daniel / Verdier-Pinard, Pascal et al. | 2012
- 3617
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Activity-dependent neuroprotector homeobox protein: A candidate protein identified in serum as diagnostic biomarker for Alzheimer's diseaseYang, Ming-Hui / Yang, Yuan-Han / Lu, Chi-Yu / Jong, Shiang-Bin / Chen, Li-Jhen / Lin, Yu-Fen / Wu, Shyh-Jong / Chu, Pei-Yu / Chung, Tze-Wen / Tyan, Yu-Chang et al. | 2012
- 3630
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Comparative proteomic analysis reveals that caspase-1 and serine protease may be involved in silkworm resistance to Bombyx mori nuclear polyhedrosis virusQin, Lvgao / Xia, Hengchuan / Shi, Haifeng / Zhou, Yajing / Chen, Liang / Yao, Qin / Liu, Xiaoyong / Feng, Fan / Yuan, Yi / Chen, Keping et al. | 2012
- 3639
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Comparative proteomic analysis for the insoluble fractions of colorectal cancer patientsYang, Hee-Young / Kwon, Joseph / Park, Hyang-Rim / Kwon, Sang-Oh / Park, Young-Kyu / Kim, Hyung-Seok / Chung, Yun-Jo / Chang, Yu-Jung / Choi, Hoon-In / Chung, Kyoung-Jin et al. | 2012
- 3654
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2D DIGE/MS to investigate the impact of slaughtering techniques on postmortem integrity of fish filet proteinsAddis, Maria Filippa / Pisanu, Salvatore / Preziosa, Elena / Bernardini, Giovanni / Pagnozzi, Daniela / Roggio, Tonina / Uzzau, Sergio / Saroglia, Marco / Terova, Genciana et al. | 2012
- 3665
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Human infant saliva peptidome is modified with age and diet transitionMorzel, Martine / Jeannin, Aline / Lucchi, Géraldine / Truntzer, Caroline / Pecqueur, Delphine / Nicklaus, Sophie / Chambon, Christophe / Ducoroy, Patrick et al. | 2012
- 3674
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Mapping cyclosporine-induced changes in protein secretion by renal cells using stable isotope labeling with amino acids in cell culture (SILAC)Lamoureux, F. / Gastinel, L.N. / Mestre, E. / Marquet, P. / Essig, M. et al. | 2012
- 3688
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Assessment of the floral origin of honey via proteomic toolsDi Girolamo, Francesco / D'Amato, Alfonsina / Righetti, Pier Giorgio et al. | 2012
- 3694
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Label free quantitative proteomic analysis of secretome by Thermobifida fusca on different lignocellulosic biomassAdav, Sunil S. / Cheow, Esther Sok Hwee / Ravindran, Anita / Dutta, Bamaprasad / Sze, Siu Kwan et al. | 2012
- 3707
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Comprehensive proteome analysis in Cenococcum geophilum Fr. as a tool to discover drought-related proteinsKerner, René / Delgado-Eckert, Edgar / Del Castillo, Estela / Müller-Starck, Gerhard / Peter, Martina / Kuster, Bernhard / Tisserant, Emilie / Pritsch, Karin et al. | 2012
- 3720
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Effective correction of experimental errors in quantitative proteomics using stable isotope labeling by amino acids in cell culture (SILAC)Park, Sung-Soo / Wu, Wells W. / Zhou, Yu / Shen, Rong-Fong / Martin, Bronwen / Maudsley, Stuart et al. | 2012
- 3733
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Another turn of the screw in shaving Gram-positive bacteria: Optimization of proteomics surface protein identification in Streptococcus pneumoniaeOlaya-Abril, Alfonso / Gómez-Gascón, Lidia / Jiménez-Munguía, Irene / Obando, Ignacio / Rodríguez-Ortega, Manuel J. et al. | 2012
- 3747
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Immunoassay-based proteome profiling of 24 pancreatic cancer cell linesAlhamdani, Mohamed Saiel Saeed / Youns, Mahmoud / Buchholz, Malte / Gress, Thomas M. / Beckers, Marie-Claire / Maréchal, Daniel / Bauer, Andrea / Schröder, Christoph / Hoheisel, Jörg D. et al. | 2012
- 3760
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Hemopexin is up-regulated in plasma from type 1 diabetes mellitus patients: Role of glucose-induced ROSChen, Chia-Ching / Lu, Ying-Chieh / Chen, Yi-Wen / Lee, Wen-Li / Lu, Chieh-Hsiang / Chen, You-Hsuan / Lee, Yun-Ching / Lin, Szu-Ting / Timms, John F. / Lee, Ying-Ray et al. | 2012
- 3778
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Analysis of oxidative stress-induced protein carbonylation using fluorescent hydrazidesTamarit, Jordi / de Hoogh, Anouk / Obis, Elia / Alsina, David / Cabiscol, Elisa / Ros, Joaquim et al. | 2012
- 3789
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Corrigendum to “SPIRE: Systematic Protein Investigative Research Environment” [J. Proteomics 75 (1) (2011) 122–126]Kolker, Eugene / Higdon, Roger / Welch, Dean / Bauman, Andrew / Stewart, Elizabeth / Haynes, Winston / Broomall, William / Kolker, Natali et al. | 2012
- IFC
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Editorial Board| 2012