LMMO: A Large Margin Approach for Refining Regulatory Motifs (English)
- New search for: Lin Zhu,
- New search for: Hong-Bo Zhang,
- New search for: De-shuang Huang,
- New search for: Lin Zhu,
- New search for: Hong-Bo Zhang,
- New search for: De-shuang Huang,
In:
IEEE/ACM Transactions on Computational Biology and Bioinformatics
;
15
, 3
;
913-925
;
2018
- Article (Journal) / Electronic Resource
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Title:LMMO: A Large Margin Approach for Refining Regulatory Motifs
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Contributors:
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Published in:IEEE/ACM Transactions on Computational Biology and Bioinformatics ; 15, 3 ; 913-925
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Publisher:
- New search for: IEEE
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Publication date:2018-05-01
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Size:1236685 byte
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ISSN:
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DOI:
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Type of media:Article (Journal)
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Type of material:Electronic Resource
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Language:English
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Source:
Table of contents – Volume 15, Issue 3
The tables of contents are generated automatically and are based on the data records of the individual contributions available in the index of the TIB portal. The display of the Tables of Contents may therefore be incomplete.
- 688
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Advances in the Application and Development of Non-Linear Global Optimization Techniques in Computational Structural BiologyHandl, J. / Shehu, A. / Santos Reyes, Jose et al. | 2018
- 690
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A Memetic Algorithm for 3D Protein Structure Prediction ProblemCorrea, Leonardo / Borguesan, Bruno / Farfan, Camilo / Inostroza-Ponta, Mario / Dorn, Marcio et al. | 2018
- 705
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A Global Network Alignment Method Using Discrete Particle Swarm OptimizationJiaxiang Huang, / Maoguo Gong, / Lijia Ma, et al. | 2018
- 719
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From Optimization to Mapping: An Evolutionary Algorithm for Protein Energy LandscapesSapin, Emmanuel / De Jong, Kenneth A. / Shehu, Amarda et al. | 2018
- 732
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Conformational Sampling of a Biomolecular Rugged Energy LandscapeRydzewski, Jakub / Jakubowski, Rafal / Nicosia, Giuseppe / Nowak, Wieslaw et al. | 2018
- 740
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GPU-Based Point Cloud Superpositioning for Structural Comparisons of Protein Binding SitesLeinweber, Matthias / Fober, Thomas / Freisleben, Bernd et al. | 2018
- 753
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A Bipartite Network and Resource Transfer-Based Approach to Infer lncRNA-Environmental Factor AssociationsJie Zhou, / Yuan-Yuan Shi, et al. | 2018
- 760
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A Combined PLS and Negative Binomial Regression Model for Inferring Association Networks from Next-Generation Sequencing Count DataPesonen, Maiju / Nevalainen, Jaakko / Potter, Steven / Datta, Somnath / Datta, Susmita et al. | 2018
- 774
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A Comparative Study for Identifying the Chromosome-Wide Spatial Clusters from High-Throughput Chromatin Conformation Capture DataXiangtao Li, / Ka-Chun Wong, et al. | 2018
- 788
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A Just-in-Time Learning Based Monitoring and Classification Method for Hyper/Hypocalcemia DiagnosisXin Peng, / Yang Tang, / Wangli He, / Wenli Du, / Feng Qian, et al. | 2018
- 802
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A Spatial-Temporal Method to Detect Global Influenza Epidemics Using Heterogeneous Data Collected from the InternetXichuan Zhou, / Fan Yang, / Yujie Feng, / Qin Li, / Fang Tang, / Shengdong Hu, / Zhi Lin, / Lei Zhang, et al. | 2018
- 813
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Aggregation for Computing Multi-Modal Stationary Distributions in 1-D Gene Regulatory NetworksAvcu, Neslihan / Pekergin, Nihal / Pekergin, Ferhan / Guzelis, Cuneyt et al. | 2018
- 828
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An Organelle Correlation-Guided Feature Selection Approach for Classifying Multi-Label Subcellular Bio-ImagesWei Shao, / Mingxia Liu, / Ying-Ying Xu, / Hong-Bin Shen, / Daoqiang Zhang, et al. | 2018
- 839
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Assessment of Semantic Similarity between Proteins Using Information Content and Topological Properties of the Gene Ontology GraphDutta, Pritha / Basu, Subhadip / Kundu, Mahantapas et al. | 2018
- 850
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BRANE Clust: Cluster-Assisted Gene Regulatory Network Inference RefinementPirayre, Aurelie / Couprie, Camille / Duval, Laurent / Pesquet, Jean-Christophe et al. | 2018
- 861
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Comparison of Machine Learning Approaches for Prediction of Advanced Liver Fibrosis in Chronic Hepatitis C PatientsHashem, Somaya / Esmat, Gamal / Elakel, Wafaa / Habashy, Shahira / Raouf, Safaa Abdel / Elhefnawi, Mohamed / Eladawy, Mohamed I. / ElHefnawi, Mahmoud et al. | 2018
- 869
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Discovering Perturbation of Modular Structure in HIV Progression by Integrating Multiple Data Sources Through Non-Negative Matrix FactorizationRay, Sumanta / Maulik, Ujjwal et al. | 2018
- 878
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Dynamics in Epistasis AnalysisAwdeh, Aseel / Phenix, Hilary / Kaern, Mads / Perkins, Theodore J. et al. | 2018
- 892
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Evolutionary Graph Clustering for Protein Complex IdentificationTiantian He, / Chan, Keith C. C. et al. | 2018
- 905
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Investigating Correlation between Protein Sequence Similarity and Semantic Similarity Using Gene Ontology AnnotationsIkram, Najmul / Qadir, Muhammad Abdul / Afzal, Muhammad Tanvir et al. | 2018
- 913
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LMMO: A Large Margin Approach for Refining Regulatory MotifsLin Zhu, / Hong-Bo Zhang, / De-shuang Huang, et al. | 2018
- 926
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Multiple-Swarm Ensembles: Improving the Predictive Power and Robustness of Predictive Models and Its Use in Computational BiologyAlves, Pedro / Shuang Liu, / Daifeng Wang, / Gerstein, Mark et al. | 2018
- 934
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NAHAL-Flex: A Numerical and Alphabetical Hinge Detection Algorithm for Flexible Protein Structure AlignmentFotoohifiroozabadi, Samira / Mohamad, Mohd Saberi / Deris, Safaai et al. | 2018
- 944
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Network-Regularized Sparse Logistic Regression Models for Clinical Risk Prediction and Biomarker DiscoveryWenwen Min, / Juan Liu, / Shihua Zhang, et al. | 2018
- 954
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Novelty Indicator for Enhanced Prioritization of Predicted Gene Ontology AnnotationsChicco, Davide / Palluzzi, Fernando / Masseroli, Marco et al. | 2018
- 966
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Prediction of HIV Drug Resistance by Combining Sequence and Structural PropertiesKhalid, Zoya / Sezerman, Osman Ugur et al. | 2018
- 974
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Regularized Non-Negative Matrix Factorization for Identifying Differentially Expressed Genes and Clustering Samples: A SurveyJin-Xing Liu, / Dong Wang, / Ying-Lian Gao, / Chun-Hou Zheng, / Yong Xu, / Jiguo Yu, et al. | 2018
- 988
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The Discovery of Mutated Driver Pathways in Cancer: Models and AlgorithmsJunhua Zhang, / Shihua Zhang, et al. | 2018
- 999
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Constructing DNA Barcode Sets Based on Particle Swarm OptimizationBin Wang, / Xuedong Zheng, / Shihua Zhou, / Changjun Zhou, / Xiaopeng Wei, / Qiang Zhang, / Ziqi Wei, et al. | 2018
- 1003
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DNA Assembly with De Bruijn Graphs Using an FPGA PlatformPoirier, Carl / Gosselin, Benoit / Fortier, Paul et al. | 2018
- 1010
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Efficient Quartet Representations of Trees and Applications to Supertree and Summary MethodsDavidson, Ruth / Lawhorn, MaLyn / Rusinko, Joseph / Weber, Noah et al. | 2018
- 1016
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Optimization of Gene Set Annotations Using Robust Trace-Norm Multitask LearningXianpeng Liang, / Lin Zhu, / De-shuang Huang, et al. | 2018
- 1022
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PerPAS: Topology-Based Single Sample Pathway Analysis MethodChengyu Liu, / Lehtonen, Rainer / Hautaniemi, Sampsa et al. | 2018
- 1028
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Sparse Pathway-Induced Dynamic Network Biomarker Discovery for Early Warning Signal Detection in Complex DiseasesTorshizi, Abolfazl Doostparast / Petzold, Linda et al. | 2018
- 1035
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Correction to “Detecting Essential Proteins Based on Network Topology, Gene Expression Data, and Gene Ontology Information”Zhang, Wei / Xu, Jia / Li, Yuanyuan / Zou, Xiufen et al. | 2018