Molecular characterization of geminivirus-derived small RNAs in different plant species (English)
- New search for: Akbergenov, Rashid
- New search for: Akbergenov, Rashid
- New search for: Si-Ammour, Azeddine
- New search for: Blevins, Todd
- New search for: Amin, Imran
- New search for: Kutter, Claudia
- New search for: Vanderschuren, Herve
- New search for: Zhang, Peng
- New search for: Gruissem, Wilhelm
- New search for: Meins, Frederick
In:
Nucleic acids research
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34
, 2
; 462-471
;
2006
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ISSN:
- Article (Journal) / Print
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Title:Molecular characterization of geminivirus-derived small RNAs in different plant species
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Contributors:Akbergenov, Rashid ( author ) / Si-Ammour, Azeddine / Blevins, Todd / Amin, Imran / Kutter, Claudia / Vanderschuren, Herve / Zhang, Peng / Gruissem, Wilhelm / Meins, Frederick
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Published in:Nucleic acids research ; 34, 2 ; 462-471
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Publisher:
- New search for: Oxford Univ. Press
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Place of publication:Oxford
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Publication date:2006
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ISSN:
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ZDBID:
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Type of media:Article (Journal)
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Type of material:Print
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Language:English
- New search for: 35.75
- Further information on Basic classification
- New search for: 275/3820
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Keywords:
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Classification:
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Source:
Table of contents – Volume 34, Issue 2
The tables of contents are generated automatically and are based on the data records of the individual contributions available in the index of the TIB portal. The display of the Tables of Contents may therefore be incomplete.
- 397
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p66[alpha] and p66b of the Mi-2-NuRD complex mediate MBD2 and histone interactionBrackertz, Marc et al. | 2006
- 397
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p66a and p66b of the Mi-2/NuRD complex mediate MBD2 and histone interactionBrackertz, M. / Gong, Z. / Leers, J. / Renkawitz, R. et al. | 2006
- 407
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Saccharomyces cerevisiae Est3p dimerizes in vitro and dimerization contributes to efficient telomere replication in vivoYang, Cui-Ping et al. | 2006
- 417
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Pol, Polz and Rev1 together are required for G to T transversion mutations induced by the (+)- and (-)-trans-anti-BPDE-N2-dG DNA adducts in yeast cellsZhao, B. / Wang, J. / Geacintov, N. E. / Wang, Z. et al. | 2006
- 417
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Pol, Pol[zeta] and Rev1 together are required for G to T transversion mutations induced by the (+)- and (-)-trans-anti-BPDE-N2-dG DNA adducts in yeast cellsZhao, Bo et al. | 2006
- 426
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Examination of an inverted repeat within the F factor origin of transfer: context dependence of F TraI relaxase DNA specificityWilliams, Sarah L. et al. | 2006
- 436
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Sub-plastidial localization of two different phage-type RNA polymerases in spinach chloroplastsAzevedo, Jacinthe et al. | 2006
- 445
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BAC to the future! or oligonucleotides: a perspective for micro array comparative genomic hybridization (array CGH)Ylstra, Bauke et al. | 2006
- 451
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2prime-Deoxy-2prime-fluoro-b-d-arabinonucleic acid (2primeF-ANA) modified oligonucleotides (ON) effect highly efficient, and persistent, gene silencingKalota, A. / Karabon, L. / Swider, C. R. / Viazovkina, E. / Elzagheid, M. / Damha, M. J. / Gewirtz, A. M. et al. | 2006
- 451
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2'-Deoxy-2'-fluoro-b-EM t="s">d-arabinonucleic acid (2'F-ANA) modified oligonucleotides (ON) effect highly efficient, and persistent, gene silencingKalota, A. et al. | 2006
- 462
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Molecular characterization of geminivirus-derived small RNAs in different plant speciesAkbergenov, Rashid et al. | 2006
- 472
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Complex interactions of HIV-1 nucleocapsid protein with oligonucleotidesFisher, Robert J. et al. | 2006
- 485
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Nucleolin links to arsenic-induced stabilization of GADD45[alpha] mRNAZhang, Yadong et al. | 2006
- 485
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Nucleolin links to arsenic-induced stabilization of GADD45a mRNAZhang, Y. / Bhatia, D. / Xia, H. / Castranova, V. / Shi, X. / Chen, F. et al. | 2006
- 496
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The Plasmodium selenoproteomeLobanov, Alexey V. et al. | 2006
- 506
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Evidence that the S.cerevisiae Sgs1 protein facilitates recombinational repair of telomeres during senescenceAzam, Mahrukh et al. | 2006
- 517
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Structure-function analysis of the kinase-CPD domain of yeast tRNA ligase (Trl1) and requirements for complementation of tRNA splicing by a plant Trl1 homologWang, Li Kai et al. | 2006
- 528
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Microarray-based DNA methylation profiling: technology and applicationsSchumacher, Axel et al. | 2006
- 543
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Regulation of the human p21(waf1-cip1) gene promoter via multiple binding sites for p53 and the vitamin D3 receptorSaramäki, Anna et al. | 2006
- 555
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High throughput detection of M6P-IGF2R intronic hypermethylation and LOH in ovarian cancerHuang, Zhiqing et al. | 2006
- 564
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Base-stacking and base-pairing contributions into thermal stability of the DNA double helixYakovchuk, Peter et al. | 2006
- 575
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Engineered external guide sequences are highly effective in inducing RNase P for inhibition of gene expression and replication of human cytomegalovirusYang, Yong-Hua et al. | 2006
- 584
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Unbiased in vitro selection reveals the unique character of the self-cleaving antigenomic HDV RNA sequenceNehdi, Atef et al. | 2006
- 593
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Nucleic acid binding and chaperone properties of HIV-1 Gag and nucleocapsid proteinsCruceanu, Margareta et al. | 2006
- 606
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Induction of the lac promoter in the absence of DNA loops and the stoichiometry of inductionOehler, Stefan et al. | 2006
- 613
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Rampant polyuridylylation of plastid gene transcripts in the dinoflagellate LingulodiniumWang, Yunling et al. | 2006
- 620
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Deletion of the Tetrahymena thermophila rDNA replication fork barrier region disrupts macronuclear rDNA excision and creates a fragile site in the micronuclear genomeYakisich, J.S. et al. | 2006
- 635
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Experimental approaches to identify non-coding RNAsHüttenhofer, Alexander et al. | 2006
- 647
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Hierarchical clustering algorithm for comprehensive orthologous-domain classification in multiple genomesUchiyama, Ikuo et al. | 2006
- 659
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Degradation of RNA in bacteria: comparison of mRNA and stable RNADeutscher, Murray P. et al. | 2006
- 667
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HEN1 recognizes 21-24 nt small RNA duplexes and deposits a methyl group onto the 2' OH of the 3' terminal nucleotideYang, Zhiyong et al. | 2006
- 667
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HEN1 recognizes 21-24 nt small RNA duplexes and deposits a methyl group onto the 2prime OH of the 3prime terminal nucleotideYang, Z. / Ebright, Y. W. / Yu, B. / Chen, X. et al. | 2006
- 676
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Two conformational states in the crystal structure of the Homo sapiens cytoplasmic ribosomal decoding A siteKondo, Jiro et al. | 2006
- 686
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Similarities and differences in interaction of K+ and Na+ with condensed ordered DNA. A molecular dynamics computer simulation studyCheng, Yuhua et al. | 2006
- 697
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Molecular dynamics simulations of sarcin-ricin rRNA motifSpacková, Nad'a et al. | 2006
- 709
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Hfq variant with altered RNA binding functionsZiolkowska, Katarzyna et al. | 2006
- 721
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Post-transcriptional nucleotide modification and alternative folding of RNAHelm, Mark et al. | 2006
- 734
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Growth inhibition and apoptosis induced by daunomycin-conjugated triplex-forming oligonucleotides targeting the c-myc gene in prostate cancer cellsNapoli, Sara et al. | 2006
- 745
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The Werner syndrome protein operates in base excision repair and cooperates with DNA polymerase bHarrigan, Jeanine A. et al. | 2006
- 755
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Sequence effects of aminofluorene-modified DNA duplexes: thermodynamic and circular dichroism propertiesMeneni, Srinivasa Rao et al. | 2006
- 764
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The genetic map and comparative analysis with the physical map of Trypanosoma bruceiMacleod, Annette et al. | 2006
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Comparison of algorithms for the analysis of Affymetrix microarray data as evaluated by co-expression of genes in known operonsHarr, Bettina et al. | 2006
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MicroRNA expression profiling of single whole embryonic stem cellsTang, Fuchou et al. | 2006
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Genetic manipulation of an exogenous non-immunoglobulin protein by gene conversion machinery in a chicken B cell lineKanayama, Naoki et al. | 2006
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A simple and effective chromosome modification method for large-scale deletion of genome sequences and identification of essential genes in fission yeastHirashima, Kyotaro et al. | 2006
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Detection of rare mutant K-ras DNA in a single-tube reaction using peptide nucleic acid as both PCR clamp and sensor probeLuo, Ji-Dung et al. | 2006
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Thorough validation of siRNA-induced cell death phenotypes defines new anti-apoptotic proteinWu, Weilin et al. | 2006
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Sequence- and structural-selective nucleic acid binding revealed by the melting of mixturesShi, Xiaochun et al. | 2006
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A general method for manipulating DNA sequences from any organism with optical tweezersFuller, Derek N. et al. | 2006
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Therapeutic protein transduction of mammalian cells and mice by nucleic acid-free lentiviral nanoparticlesLink, Nils et al. | 2006
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EDITORIAL| 2006
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A compilation of molecular biology web servers: 2006 update on the Bioinformatics Links DirectoryFox, Joanne A. et al. | 2006
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BLAST: improvements for better sequence analysisYe, Jian et al. | 2006
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FISH-family identification of sequence homologues using structure anchored hidden Markov modelsTångrot, Jeanette et al. | 2006
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The MIGenAS integrated bioinformatics toolkit for web-based sequence analysisRampp, Markus et al. | 2006
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PAST: fast structure-based searching in the PDBTäubig, Hanjo et al. | 2006
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PreBI: prediction of biological interfaces of proteins in crystalsTsuchiya, Yuko et al. | 2006
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oGNM: online computation of structural dynamics using the Gaussian Network ModelYang, Lee-Wei et al. | 2006
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PROFEAT: a web server for computing structural and physicochemical features of proteins and peptides from amino acid sequenceLi, Z.R. et al. | 2006
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PDB_Hydro: incorporating dipolar solvents with variable density in the Poisson-Boltzmann treatment of macromolecule electrostaticsAzuara, Cyril et al. | 2006
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PHEPS: web-based pH-dependent Protein Electrostatics ServerKantardjiev, Alexander A. et al. | 2006
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pKD: re-designing protein pKa valuesTynan-Connolly, Barbara M. et al. | 2006
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NOMAD-Ref: visualization, deformation and refinement of macromolecular structures based on all-atom normal mode analysisLindahl, Erik et al. | 2006
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UMMS: constrained harmonic and anharmonic analyses of macromolecules based on elastic network modelsJang, Yunho et al. | 2006
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PREDITOR: a web server for predicting protein torsion angle restraintsBerjanskii, Mark V. et al. | 2006
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FOLD-RATE: prediction of protein folding rates from amino acid sequenceGromiha, M.Michael et al. | 2006
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Protein Peeling 2: a web server to convert protein structures into series of protein unitsGelly, J.-C. et al. | 2006
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ProSAT2-Protein Structure Annotation ServerGabdoulline, R.R. et al. | 2006
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FeatureMap3D-a tool to map protein features and sequence conservation onto homologous structures in the PDBWernersson, Rasmus et al. | 2006
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ProKware: integrated software for presenting protein structural properties in protein tertiary structuresHung, Jui-Hung et al. | 2006
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OPAAS: a web server for optimal, permuted, and other alternative alignments of protein structuresShih, Edward S.C. et al. | 2006
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Localizome: a server for identifying transmembrane topologies and TM helices of eukaryotic proteins utilizing domain informationLee, Sunghoon et al. | 2006
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TreeDomViewer: a tool for the visualization of phylogeny and protein domain structureAlako, Blaise T.F. et al. | 2006
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TreeDet: a web server to explore sequence spaceCarro, Angel et al. | 2006
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CASTp: computed atlas of surface topography of proteins with structural and topographical mapping of functionally annotated residuesDundas, Joe et al. | 2006
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Protein Block Expert (PBE): a web-based protein structure analysis server using a structural alphabetTyagi, M. et al. | 2006
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ReadOut: structure-based calculation of direct and indirect readout energies and specificities for protein-DNA recognitionAhmad, Shandar et al. | 2006
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3dSS: 3D structural superpositionSumathi, K. et al. | 2006
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MAVL-StickWRLD: analyzing structural constraints using interpositional dependencies in biomolecular sequence alignmentsOzer, Hatice Gulcin et al. | 2006
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HHrep: de novo protein repeat detection and the origin of TIM barrelsSöding, Johannes et al. | 2006
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Cascade PSI-BLAST web server: a remote homology search tool for relating protein domainsBhadra, R. et al. | 2006
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SABBAC: online Structural Alphabet-based protein BackBone reconstruction from Alpha-Carbon traceMaupetit, Julien et al. | 2006
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(PS)2: protein structure prediction serverChen, Chih-Chieh et al. | 2006
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KemaDom: a web server for domain prediction using kernel machine with local contextChen, Lusheng et al. | 2006
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Spritz: a server for the prediction of intrinsically disordered regions in protein sequences using kernel machinesVullo, Alessandro et al. | 2006
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PONGO: a web server for multiple predictions of all-alpha transmembrane proteinsAmico, Mauro et al. | 2006
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ArchPRED: a template based loop structure prediction serverFernandez-Fuentes, Narcis et al. | 2006
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DISULFIND: a disulfide bonding state and cysteine connectivity prediction serverCeroni, Alessio et al. | 2006
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DiANNA 1.1: an extension of the DiANNA web server for ternary cysteine classificationFerrè, F. et al. | 2006
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PROFtmb: a web server for predicting bacterial transmembrane beta barrel proteinsBigelow, Henry et al. | 2006
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transFold: a web server for predicting the structure and residue contacts of transmembrane beta-barrelsWaldispühl, J. et al. | 2006
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SVMHC: a server for prediction of MHC-binding peptidesDönnes, Pierre et al. | 2006
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REMUS: a tool for identification of unique peptide segments as epitopesPai, Tun-Wen et al. | 2006
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AlgPred: prediction of allergenic proteins and mapping of IgE epitopesSaha, Sudipto et al. | 2006
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pTARGET: a web server for predicting protein subcellular localizationGuda, Chittibabu et al. | 2006
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DOUTfinder-identification of distant domain outliers using subsignificant sequence similarityNovatchkova, Maria et al. | 2006
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TarFisDock: a web server for identifying drug targets with docking approachLi, Honglin et al. | 2006
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sgTarget: a target selection resource for structural genomicsRodrigues, Ana P.C. et al. | 2006
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HARMONY: a server for the assessment of protein structuresPugalenthi, G. et al. | 2006
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RosettaDesign server for protein designLiu, Yi et al. | 2006
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CUPSAT: prediction of protein stability upon point mutationsParthiban, Vijaya et al. | 2006
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BindN: a web-based tool for efficient prediction of DNA and RNA binding sites in amino acid sequencesWang, Liangjiang et al. | 2006
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MeMo: a web tool for prediction of protein methylation modificationsChen, Hu et al. | 2006
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SUMOsp: a web server for sumoylation site predictionXue, Yu et al. | 2006
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MODi: a powerful and convenient web server for identifying multiple post-translational peptide modifications from tandem mass spectraKim, Sangtae et al. | 2006
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DyNAVacS: an integrative tool for optimized DNA vaccine designHarish, Nagarajan et al. | 2006
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NeuroPred: a tool to predict cleavage sites in neuropeptide precursors and provide the masses of the resulting peptidesSouthey, Bruce R. et al. | 2006
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BAGEL: a web-based bacteriocin genome mining toolde Jong, Anne et al. | 2006
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GeneAlign: a coding exon prediction tool based on phylogenetical comparisonsHsieh, Shu Ju et al. | 2006
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TOM: a web-based integrated approach for identification of candidate disease genesRossi, Simona et al. | 2006
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WEGO: a web tool for plotting GO annotationsYe, Jia et al. | 2006
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APID: Agile Protein Interaction DataAnalyzerPrieto, Carlos et al. | 2006
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Protemot: prediction of protein binding sites with automatically extracted geometrical templatesChang, Darby Tien-Hao et al. | 2006
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GRAMM-X public web server for protein-protein dockingTovchigrechko, Andrey et al. | 2006
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TSEMA: interactive prediction of protein pairings between interacting familiesIzarzugaza, José M.G. et al. | 2006
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kinDOCK: a tool for comparative docking of protein kinase ligandsMartin, Laetitia et al. | 2006
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YOGY: a web-based, integrated database to retrieve protein orthologs and associated Gene Ontology termsPenkett, Christopher J. et al. | 2006
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The MPI Bioinformatics Toolkit for protein sequence analysisBiegert, Andreas et al. | 2006
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VIRGO: computational prediction of gene functionsMassjouni, Naveed et al. | 2006
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TACT: Transcriptome Auto-annotation Conducting Tool of H-InvDBYamasaki, Chisato et al. | 2006
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DILIMOT: discovery of linear motifs in proteinsNeduva, Victor et al. | 2006
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MAGIIC-PRO: detecting functional signatures by efficient discovery of long patterns in protein sequencesHsu, Chen-Ming et al. | 2006
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ScanProsite: detection of PROSITE signature matches and ProRule-associated functional and structural residues in proteinsde Castro, Edouard et al. | 2006
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MicroFootPrinter: a tool for phylogenetic footprinting in prokaryotic genomesNeph, Shane et al. | 2006
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MEME: discovering and analyzing DNA and protein sequence motifsBailey, Timothy L. et al. | 2006
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HHsenser: exhaustive transitive profile search using HMM-HMM comparisonSöding, Johannes et al. | 2006
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JAFA: a protein function annotation meta-serverFriedberg, Iddo et al. | 2006
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SWAKK: a web server for detecting positive selection in proteins using a sliding window substitution rate analysisLiang, Han et al. | 2006
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Virtual Ribosome-a comprehensive DNA translation tool with support for integration of sequence feature annotationWernersson, Rasmus et al. | 2006
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GenDecoder: genetic code prediction for metazoan mitochondriaAbascal, Federico et al. | 2006
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NAST: a multiple sequence alignment server for comparative analysis of 16S rRNA genesDesantis, T.Z. et al. | 2006
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CrossLink: visualization and exploration of sequence relationships between (micro) RNAsDezulian, Tobias et al. | 2006
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CorreLogo: an online server for 3D sequence logos of RNA and DNA alignmentsBindewald, Eckart et al. | 2006
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The ARTS web server for aligning RNA tertiary structuresDror, Oranit et al. | 2006
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PseudoViewer: web application and web service for visualizing RNA pseudoknots and secondary structuresByun, Yanga et al. | 2006
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RNAMST: efficient and flexible approach for identifying RNA structural homologsChang, Tzu-Hao et al. | 2006
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RegRNA: an integrated web server for identifying regulatory RNA motifs and elementsHuang, Hsi-Yuan et al. | 2006
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AUGUSTUS: ab initio prediction of alternative transcriptsStanke, Mario et al. | 2006
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ASPIC: a web resource for alternative splicing prediction and transcript isoforms characterizationCastrignan`o, Tiziana et al. | 2006
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ASGS: an alternative splicing graph web serviceBollina, Durgaprasad et al. | 2006
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siVirus: web-based antiviral siRNA design software for highly divergent viral sequencesNaito, Yuki et al. | 2006
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RNAhybrid: microRNA target prediction easy, fast and flexibleKrüger, Jan et al. | 2006
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ProMiR II: a web server for the probabilistic prediction of clustered, nonclustered, conserved and nonconserved microRNAsNam, Jin-Wu et al. | 2006
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EGassembler: online bioinformatics service for large-scale processing, clustering and assembling ESTs and genomic DNA fragmentsMasoudi-Nejad, Ali et al. | 2006
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jpHMM at GOBICS: a web server to detect genomic recombinations in HIV-1Zhang, Ming et al. | 2006
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BiologicalNetworks: visualization and analysis tool for systems biologyBaitaluk, Michael et al. | 2006
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BABELOMICS: a systems biology perspective in the functional annotation of genome-scale experimentsAl-Shahrour, Fátima et al. | 2006
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CAPweb: a bioinformatics CGH array Analysis PlatformLiva, Stéphane et al. | 2006
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BTW: a web server for Boltzmann time warping of gene expression time seriesFerrè, F. et al. | 2006
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Next station in microarray data analysis: GEPASMontaner, David et al. | 2006
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GEPS: the Gene Expression Pattern ScannerWang, Yu-Peng et al. | 2006
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CARMAweb: comprehensive R- and bioconductor-based web service for microarray data analysisRainer, Johannes et al. | 2006
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Arabidopsis Co-expression Tool (ACT): web server tools for microarray-based gene expression analysisManfield, Iain W. et al. | 2006
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JProGO: a novel tool for the functional interpretation of prokaryotic microarray data using Gene Ontology informationScheer, Maurice et al. | 2006
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Zinc Finger Tools: custom DNA-binding domains for transcription factors and nucleasesMandell, Jeffrey G. et al. | 2006
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TFBScluster web server for the identification of mammalian composite regulatory elementsDonaldson, Ian J. et al. | 2006
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VOMBAT: prediction of transcription factor binding sites using variable order Bayesian treesGrau, Jan et al. | 2006
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POXO: a web-enabled tool series to discover transcription factor binding sitesKankainen, Matti et al. | 2006
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Composite Module Analyst: identification of transcription factor binding site combinations using genetic algorithmWaleev, T. et al. | 2006
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jPREdictor: a versatile tool for the prediction of cis-regulatory elementsFiedler, Thomas et al. | 2006
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CEAS: cis-regulatory element annotation systemJi, Xuwo et al. | 2006
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Stubb: a program for discovery and analysis of cis-regulatory modulesSinha, Saurabh et al. | 2006
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NXSensor web tool for evaluating DNA for nucleosome exclusion sequences and accessibility to binding factorsLuykx, Peter et al. | 2006
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MoD Tools: regulatory motif discovery in nucleotide sequences from co-regulated or homologous genesPavesi, Giulio et al. | 2006
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CRSD: a comprehensive web server for composite regulatory signature discoveryLiu, Chun-Chi et al. | 2006
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PromAn: an integrated knowledge-based web server dedicated to promoter analysisLardenois, Aurélie et al. | 2006
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iCR: a web tool to identify conserved targets of a regulatory protein across the multiple related prokaryotic speciesRanjan, Sarita et al. | 2006
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TICO: a tool for postprocessing the predictions of prokaryotic translation initiation sitesTech, M. et al. | 2006
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FeatureScan: revealing property-dependent similarity of nucleotide sequencesDeyneko, Igor V. et al. | 2006
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Kalign, Kalignvu and Mumsa: web servers for multiple sequence alignmentLassmann, Timo et al. | 2006
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PROTOGENE: turning amino acid alignments into bona fide CDS nucleotide alignmentsMoretti, Sébastien et al. | 2006
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Expresso: automatic incorporation of structural information in multiple sequence alignments using 3D-CoffeeArmougom, Fabrice et al. | 2006
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PAL2NAL: robust conversion of protein sequence alignments into the corresponding codon alignmentsSuyama, Mikita et al. | 2006
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AliWABA: alignment on the web through an A-Bruijn approachJones, Neil C. et al. | 2006
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FootPrinter3: phylogenetic footprinting in partially alignable sequencesFang, Fei et al. | 2006
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PupaSuite: finding functional single nucleotide polymorphisms for large-scale genotyping purposesConde, Lucia et al. | 2006
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New Onto-Tools: Promoter-Express, nsSNPCounter and Onto-TranslateKhatri, Purvesh et al. | 2006
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PDA v.2: improving the exploration and estimation of nucleotide polymorphism in large datasets of heterogeneous DNACasillas, S`onia et al. | 2006
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FASTSNP: an always up-to-date and extendable service for SNP function analysis and prioritizationYuan, Hsiang-Yu et al. | 2006
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SNP@Domain: a web resource of single nucleotide polymorphisms (SNPs) within protein domain structures and sequencesHan, Areum et al. | 2006
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SNPmasker: automatic masking of SNPs and repeats across eukaryotic genomesAndreson, Reidar et al. | 2006
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SSRPrimer and SSR Taxonomy Tree: Biome SSR discoveryJewell, Erica et al. | 2006
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MutScreener: primer design tool for PCR-direct sequencingYao, Fengxia et al. | 2006
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PrimerStation: a highly specific multiplex genomic PCR primer design server for the human genomeYamada, Tomoyuki et al. | 2006
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GeMprospector-online design of cross-species genetic marker candidates in legumes and grassesFredslund, Jakob et al. | 2006
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QGRS Mapper: a web-based server for predicting G-quadruplexes in nucleotide sequencesKikin, Oleg et al. | 2006
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Quadfinder: server for identification and analysis of quadruplex-forming motifs in nucleotide sequencesScaria, Vinod et al. | 2006
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GC-Profile: a web-based tool for visualizing and analyzing the variation of GC content in genomic sequencesGao, Feng et al. | 2006
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CorGen-measuring and generating long-range correlations for DNA sequence analysisMesser, Philipp W. et al. | 2006
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SPRING: a tool for the analysis of genome rearrangement using reversals and block-interchangesLin, Ying Chih et al. | 2006
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ModelTest Server: a web-based tool for the statistical selection of models of nucleotide substitution onlinePosada, David et al. | 2006
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The internal transcribed spacer 2 database-a web server for (not only) low level phylogenetic analysesSchultz, Jörg et al. | 2006
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PLOTREP: a web tool for defragmentation and visual analysis of dispersed genomic repeatsToth, Gábor et al. | 2006
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The Path-A metabolic pathway prediction web serverPireddu, Luca et al. | 2006
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KOBAS server: a web-based platform for automated annotation and pathway identificationWu, Jianmin et al. | 2006
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metaSHARK: a WWW platform for interactive exploration of metabolic networksHyland, Christopher et al. | 2006
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Taverna: a tool for building and running workflows of servicesHull, Duncan et al. | 2006
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GlyNest and CASPER: two independent approaches to estimate 1H and 13C NMR shifts of glycans available through a common web-interfaceLoß, Alexander et al. | 2006
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FAF-Drugs: free ADME-tox filtering of compound collectionsMiteva, Maria A. et al. | 2006
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HubMed: a web-based biomedical literature search interfaceEaton, Alfred D. et al. | 2006
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botXminer: mining biomedical literature with a new web-based applicationMudunuri, Uma et al. | 2006