Identification of new drug classification terms in textual resources (English)
- New search for: Kolárik, Corinna
- New search for: Kolárik, Corinna
- New search for: Hofmann-Apitius, Martin
- New search for: Zimmermann, Marc
- New search for: Fluck, Juliane
In:
Bioinformatics
;
23
, 13
; i264
;
2007
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ISSN:
- Article (Journal) / Print
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Title:Identification of new drug classification terms in textual resources
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Contributors:
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Published in:Bioinformatics ; 23, 13 ; i264
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Publisher:
- New search for: Oxford Univ. Press
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Place of publication:Oxford
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Publication date:2007
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ISSN:
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ZDBID:
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Type of media:Article (Journal)
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Type of material:Print
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Language:English
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Keywords:
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Classification:
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Source:
Table of contents – Volume 23, Issue 13
The tables of contents are generated automatically and are based on the data records of the individual contributions available in the index of the TIB portal. The display of the Tables of Contents may therefore be incomplete.
- 1573
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OSLay: optimal syntenic layout of unfinished assembliesRichter, Daniel C. et al. | 2007
- 1580
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iHMMune-align: hidden Markov model-based alignment and identification of germline genes in rearranged immunoglobulin gene sequencesGaëta, Bruno A. et al. | 2007
- 1588
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Murlet: a practical multiple alignment tool for structural RNA sequencesKiryu, Hisanori et al. | 2007
- 1599
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Meta-analysis of gene expression data: a predictor-based approachFishel, Irit et al. | 2007
- 1607
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Weighted rank aggregation of cluster validation measures: a Monte Carlo cross-entropy approachPihur, Vasyl et al. | 2007
- 1616
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A network-based method for target selection in metabolic networksGuimerà, R. et al. | 2007
- 1623
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Time-varying modeling of gene expression regulatory networks using the wavelet dynamic vector autoregressive methodFujita, A. et al. | 2007
- 1631
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Alignment of molecular networks by integer quadratic programmingZhenping, Li et al. | 2007
- 1640
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Comparing association network algorithms for reverse engineering of large-scale gene regulatory networks: synthetic versus real dataSoranzo, Nicola et al. | 2007
- 1648
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An efficient method for the detection and elimination of systematic error in high-throughput screeningMakarenkov, Vladimir et al. | 2007
- 1658
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A quantitative model for linking two disparate sets of articles in MEDLINETorvik, Vetle I. et al. | 2007
- 1666
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Phenotypic clustering of yeast mutants based on kinetochore microtubule dynamicsJaqaman, K. et al. | 2007
- 1674
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The qualitative and time-dependent character of spatial relations in biomedical ontologiesBittner, Thomas et al. | 2007
- 1683
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SciRoKo: a new tool for whole genome microsatellite search and investigationKofler, Robert et al. | 2007
- 1686
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CTX-BLAST: context sensitive version of protein BLASTGambin, Anna et al. | 2007
- 1689
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AutoCSA, an algorithm for high throughput DNA sequence variant detection in cancer genomesDicks, E. et al. | 2007
- 1692
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SNP detection exploiting multiple sources of redundancy in large EST collections improves validation ratesHayes, Ben J. et al. | 2007
- 1694
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TFmodeller: comparative modelling of protein DNA complexesContreras-Moreira, Bruno et al. | 2007
- 1697
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GAzer: gene set analyzerKim, Sang-Bae et al. | 2007
- 1700
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CALIB: a Bioconductor package for estimating absolute expression levels from two-color microarray dataZhao, Hui et al. | 2007
- 1702
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WilcoxCV: an R package for fast variable selection in cross-validationBoulesteix, Anne-Laure et al. | 2007
- 1705
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PQuad a visual analysis platform for proteomic data exploration of microbial organismsWebb-Robertson, Bobbie-Jo M. et al. | 2007
- 1708
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FASPAD: fast signaling pathway detectionHüffner, Falk et al. | 2007
- 1710
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DITOP: drug-induced toxicity related protein databaseZhang, Jing-Xian et al. | 2007
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Homology search for genesCui, Xuefeng et al. | 2007
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A graph-based approach to systematically reconstruct human transcriptional regulatory modulesYan, Xifeng et al. | 2007
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Functional annotation of regulatory pathwaysPandey, Jayesh et al. | 2013
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Inferring missing genotypes in large SNP panels using fast nearest-neighbor searches over sliding windowsRoberts, Adam et al. | 2013
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Reconstruction of highly heterogeneous gene-content evolution across the three domains of lifeIwasaki, Wataru et al. | 2013
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Computational prediction of host-pathogen protein protein interactionsDyer, Matthew D. et al. | 2007
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Adaptive torsion-angle quasi-statics: a general simulation method with applications to protein structure analysis and designRossi, Romain et al. | 2007
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Anisotropic fluctuations of amino acids in protein structures: insights from X-ray crystallography and elastic network modelsEyal, Eran et al. | 2007
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Kernel-based data fusion for gene prioritizationDe Bie, Tijl et al. | 2007
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Biases induced by pooling samples in microarray experimentsMary-Huard, Tristan et al. | 2013
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Towards realistic codon models: among site variability and dependency of synonymous and non-synonymous ratesMayrose, Itay et al. | 2013
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RankMotif++: a motif-search algorithm that accounts for relative ranks of K-mers in binding transcription factorsChen, Xiaoyu et al. | 2013
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A Chado case study: an ontology-based modular schema for representing genome-associated biological informationMungall, Christopher J. et al. | 2013
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Identification of functional modules from conserved ancestral protein protein interactionsDutkowski, Janusz et al. | 2013
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Reconstructing sibling relationships in wild populationsBerger-Wolf, Tanya Y. et al. | 2013
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Information theory applied to the sparse gene ontology annotation network to predict novel gene functionTao, Ying et al. | 2013
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Locomotif: from graphical motif description to RNA motif searchReeder, Janina et al. | 2007
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Nested effects models for high-dimensional phenotyping screensMarkowetz, Florian et al. | 2007
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A physical model for tiling array analysisChung, Ho-Ryun et al. | 2007
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A statistical method for alignment-free comparison of regulatory sequencesKantorovitz, Miriam R. et al. | 2007
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Prediction of DNA-binding residues from sequenceOfran, Yanay et al. | 2007
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Annotating gene function by combining expression data with a modular gene networkShiga, Motoki et al. | 2007
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From protein microarrays to diagnostic antigen discovery: a study of the pathogen Francisella tularensisSundaresh, Suman et al. | 2007
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Identification of new drug classification terms in textual resourcesKolárik, Corinna et al. | 2007
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SNP mining porcine ESTs with MAVIANT, a novel tool for SNP evaluation and annotationPanitz, Frank et al. | 2013
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Efficient parameter estimation for RNA secondary structure predictionAndronescu, Mirela et al. | 2013
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Systematic discovery of functional modules and context-specific functional annotation of human genomeHuang, Yu et al. | 2013
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Structural templates predict novel protein interactions and targets from pancreas tumour gene expression dataDawelbait, Gihan et al. | 2007
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Connecting quantitative regulatory-network models to the genomePan, Yue et al. | 2007
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Choosing where to look next in a mutation sequence space: Active Learning of informative p53 cancer rescue mutantsDanziger, Samuel A. et al. | 2007
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In search of lost intronsCsurös, Miklós et al. | 2013
-
Modeling recurrent DNA copy number alterations in array CGH dataShah, Sohrab P. et al. | 2013
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Spectrum: joint bayesian inference of population structure and recombination eventsSohn, Kyung-Ah et al. | 2013
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A geometric approach for the alignment of liquid chromatography mass spectrometry dataLange, Eva et al. | 2013
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Kinetics analysis methods for approximate folding landscapesTapia, Lydia et al. | 2013
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An ensemble framework for clustering protein protein interaction networksAsur, Sitaram et al. | 2007
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Comparative analysis of microarray normalization procedures: effects on reverse engineering gene networksLim, Wei Keat et al. | 2007
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Bayesian association of haplotypes and non-genetic factors to regulatory and phenotypic variation in human populationsHuang, Jim C. et al. | 2007
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Automated image analysis of protein localization in budding yeastChen, Shann-Ching et al. | 2007
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SPINE: a framework for signaling-regulatory pathway inference from cause-effect experimentsOurfali, Oved et al. | 2007
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Using dynamic programming to create isotopic distribution maps from mass spectraMcIlwain, Sean et al. | 2013
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Genomic characterization of perturbation sensitivityOhn, Jung Hun et al. | 2013
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Manual curation is not sufficient for annotation of genomic databasesBaumgartner, William A. et al. | 2013
-
Translation initiation site prediction on a genomic scale: beauty in simplicitySaeys, Yvan et al. | 2013
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Exploring the lipoprotein composition using Bayesian regression on serum lipidomic profilesSysi-Aho, Marko et al. | 2013
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Cotranslational protein folding fact or fiction?Deane, Charlotte M. et al. | 2013
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Learning to extract relations for protein annotationKim, Jee-Hyub et al. | 2007
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Different mechanistic requirements for prokaryotic and eukaryotic chaperonins: a lattice studyJacob, Etai et al. | 2007
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Nucleotide variation of regulatory motifs may lead to distinct expression patternsSegal, Liat et al. | 2007
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Negation of protein protein interactions: analysis and extractionSanchez-Graillet, Olivia et al. | 2007
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ISMB/ECCB 2007| 2013
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Co-occurrence analysis of insertional mutagenesis data reveals cooperating oncogenesde Ridder, Jeroen et al. | 2013
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Polyploids, genome halving and phylogenySankoff, David et al. | 2013
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Multiple alignment by aligning alignmentsWheeler, Travis J. et al. | 2007
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Continuous hidden process model for time series expression experimentsShi, Yanxin et al. | 2007
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Optimized design and assessment of whole genome tiling arraysGräf, Stefan et al. | 2007
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Probabilistic whole-genome alignments reveal high indel rates in the human and mouse genomesLunter, Gerton et al. | 2007
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Computational modeling of Caenorhabditis elegans vulval inductionSun, Xiaoyun et al. | 2007
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GPDTI: A Genetic Programming Decision Tree Induction method to find epistatic effects in common complex diseasesEstrada-Gil, Jesús K. et al. | 2013
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Using genome-context data to identify specific types of functional associations in pathway/genome databasesGreen, Michelle L. et al. | 2013
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ISMB/ECCB 2007 Organization| 2013
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Multiway analysis of epilepsy tensorsAcar, Evrim et al. | 2007
-
Gene selection via the BAHSIC family of algorithmsSong, Le et al. | 2007
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Semiparametric functional mapping of quantitative trait loci governing long-term HIV dynamicsWu, Song et al. | 2013
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Supervised reconstruction of biological networks with local modelsBleakley, Kevin et al. | 2013
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Dead-End Elimination with Backbone FlexibilityGeorgiev, Ivelin et al. | 2013
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Inferring protein DNA dependencies using motif alignments and mutual informationMahony, Shaun et al. | 2007
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Automatic genome-wide reconstruction of phylogenetic gene treesWapinski, Ilan et al. | 2007