High-Throughput SISCAPA Quantitation of Peptides from Human Plasma Digests by Ultrafast, Liquid Chromatography-Free Mass Spectrometry (English)
- New search for: Razavi, Morteza
- New search for: Razavi, Morteza
- New search for: Frick, Lauren E.
- New search for: LaMarr, William A.
- New search for: Pope, Matthew E.
- New search for: Miller, Christine A.
- New search for: Anderson, N. Leigh
- New search for: Pearson, Terry W.
In:
Journal of proteome research
;
11
, 12
; 5642-5649
;
2012
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ISSN:
- Article (Journal) / Print
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Title:High-Throughput SISCAPA Quantitation of Peptides from Human Plasma Digests by Ultrafast, Liquid Chromatography-Free Mass Spectrometry
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Contributors:
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Published in:Journal of proteome research ; 11, 12 ; 5642-5649
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Publisher:
- New search for: American Chemical Society
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Place of publication:Washington, DC
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Publication date:2012
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ISSN:
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ZDBID:
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Type of media:Article (Journal)
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Type of material:Print
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Language:English
- New search for: 35.76 / 35.76 / 42.20 / 42.20
- Further information on Basic classification
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Source:
Table of contents – Volume 11, Issue 12
The tables of contents are generated automatically and are based on the data records of the individual contributions available in the index of the TIB portal. The display of the Tables of Contents may therefore be incomplete.
- 5573
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Gut Microbial Activity, Implications for Health and Disease: The Potential Role of Metabolite AnalysisNyangale, Edna. P. / Mottram, Donald. S. / Gibson, Glenn. R. et al. | 2012
- 5586
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Recognizing Uncertainty Increases Robustness and Reproducibility of Mass Spectrometry-based Protein InferencesSerang, Oliver / Moruz, Luminita / Hoopmann, Michael R. / Käll, Lukas et al. | 2012
- 5592
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Improving International Research with Clinical Specimens: 5 Achievable ObjectivesLaBaer, Joshua et al. | 2012
- 5602
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Metabolic Sequences of Anaerobic Fermentation on Glucose-Based Feeding Substrates Based on Correlation Analyses of Microbial and Metabolite ProfilingDate, Yasuhiro / Iikura, Tomohiro / Yamazawa, Akira / Moriya, Shigeharu / Kikuchi, Jun et al. | 2012
- 5611
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Comparative and Targeted Proteomic Analyses of Urinary Microparticles from Bladder Cancer and Hernia PatientsChen, Chien-Lun / Lai, Yue-Fan / Tang, Petrus / Chien, Kun-Yi / Yu, Jau-Song / Tsai, Cheng-Han / Chen, Hsiao-Wei / Wu, Chih-Ching / Chung, Ting / Hsu, Chia-Wei et al. | 2012
- 5630
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Identifying Novel Protein Complexes in Cancer Cells Using Epitope-Tagging of Endogenous Human Genes and Affinity-Purification Mass SpectrometrySong, Jing / Hao, Yujun / Du, Zhanwen / Wang, Zhenghe / Ewing, Rob M. et al. | 2012
- 5642
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High-Throughput SISCAPA Quantitation of Peptides from Human Plasma Digests by Ultrafast, Liquid Chromatography-Free Mass SpectrometryRazavi, Morteza / Frick, Lauren E. / LaMarr, William A. / Pope, Matthew E. / Miller, Christine A. / Anderson, N. Leigh / Pearson, Terry W. et al. | 2012
- 5650
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Urinary Proteome Analysis of Irritable Bowel Syndrome (IBS) Symptom SubgroupsGoo, Young Ah / Cain, Kevin / Jarrett, Monica / Smith, Lynne / Voss, Joachim / Tolentino, Ernie / Tsuji, Joyce / Tsai, Yihsuan S. / Panchaud, Alexandre / Goodlett, David R. et al. | 2012
- 5663
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Proteomic and Phosphoproteomic Analysis of Chicken Embryo Fibroblasts Infected with Cell Culture-Attenuated and Vaccine Strains of Marek’s Disease VirusChien, Ko-yi / Blackburn, Kevin / Liu, Hsiao-Ching / Goshe, Michael B. et al. | 2012
- 5678
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Extracellular Proteome of a Highly Invasive Multidrug-resistant Clinical Strain of Acinetobacter baumanniiMendez, Jose Antonio / Soares, Nelson C. / Mateos, Jesús / Gayoso, Carmen / Rumbo, Carlos / Aranda, Jesús / Tomas, Maria / Bou, Germán et al. | 2012
- 5695
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Automated Phosphopeptide Identification Using Multiple MS/MS Fragmentation ModesVandenbogaert, Mathias / Hourdel, Véronique / Jardin-Mathé, Olivia / Bigeard, Jean / Bonhomme, Ludovic / Legros, Véronique / Hirt, Heribert / Schwikowski, Benno / Pflieger, Delphine et al. | 2012
- 5704
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Plasmodium falciparum Endoplasmic Reticulum-Resident Calcium Binding Protein Is a Possible Target of Synthetic Antimalarial Endoperoxides, N‑89 and N‑251Morita, Masayuki / Sanai, Hitomi / Hiramoto, Akiko / Sato, Akira / Hiraoka, Osamu / Sakura, Takaya / Kaneko, Osamu / Masuyama, Araki / Nojima, Masatomo / Wataya, Yusuke et al. | 2012
- 5712
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Amino Termini of Many Yeast Proteins Map to Downstream Start CodonsFournier, Claire T. / Cherny, Justin J. / Truncali, Kris / Robbins-Pianka, Adam / Lin, Miin S. / Krizanc, Danny / Weir, Michael P. et al. | 2012
- 5712
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Amino Terminal of Many Yeast Proteins Map to Downstream Start CodonsFournier, C.T. / Cherny, J.J. / Truncali, K. / Robbins-Planka, A. / Lin, M.S. / Krizanc, D. / Weir, M.P. et al. | 2012
- 5720
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High-throughput Isolation and Characterization of Untagged Membrane Protein Complexes: Outer Membrane Complexes of Desulfovibrio vulgarisWalian, Peter J. / Allen, Simon / Shatsky, Maxim / Zeng, Lucy / Szakal, Evelin D. / Liu, Haichuan / Hall, Steven C. / Fisher, Susan J. / Lam, Bonita R. / Singer, Mary E. et al. | 2012
- 5736
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Discovery of SLC3A2 Cell Membrane Protein as a Potential Gastric Cancer Biomarker: Implications in Molecular ImagingYang, Yixuan / Toy, Weiyi / Choong, Lee Yee / Hou, Peiling / Ashktorab, Hassan / Smoot, Duane T / Yeoh, Khay Guan / Lim, Yoon Pin et al. | 2012
- 5748
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Variability of Protein and Phosphoprotein Levels in Clinical Tissue Specimens during the Preanalytical PhaseGündisch, Sibylle / Hauck, Stefanie / Sarioglu, Hakan / Schott, Christina / Viertler, Christian / Kap, Marcel / Schuster, Tibor / Reischauer, Bilge / Rosenberg, Robert / Verhoef, Cornelis et al. | 2012
- 5763
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Protein Profiling of Active Cysteine Cathepsins in Living Cells Using an Activity-Based Probe Containing a Cell-Penetrating PeptideFan, Fengkai / Nie, Si / Dammer, Eric B. / Duong, Duc M. / Pan, Deng / Ping, Lingyan / Zhai, Linhui / Wu, Junzhu / Hong, Xuechuan / Qin, Lingsong et al. | 2012
- 5773
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Unipept: Tryptic Peptide-Based Biodiversity Analysis of Metaproteome SamplesMesuere, Bart / Devreese, Bart / Debyser, Griet / Aerts, Maarten / Vandamme, Peter / Dawyndt, Peter et al. | 2012
- 5781
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An Extended Spectrum of Target Proteins and Modification Sites in the General O‑Linked Protein Glycosylation System in Neisseria gonorrhoeaeAnonsen, Jan Haug / Vik, Åshild / Egge-Jacobsen, Wolfgang / Koomey, Michael et al. | 2012
- 5794
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Proteomic Analysis of Alterations Induced by Perinatal Hypoxic–Ischemic Brain InjuryRosenkranz, Katja / May, Caroline / Meier, Carola / Marcus, Katrin et al. | 2012
- 5804
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Glycoproteomic Analysis of Human Fibrinogen Reveals Novel Regions of O‑GlycosylationZauner, Gerhild / Hoffmann, Marcus / Rapp, Erdmann / Koeleman, Carolien A. M. / Dragan, Irina / Deelder, André M. / Wuhrer, Manfred / Hensbergen, Paul J. et al. | 2012
- 5815
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Biochemical and Proteomic Analyses Reveal that Populus cathayana Males and Females Have Different Metabolic Activities under Chilling StressZhang, Sheng / Feng, Lihua / Jiang, Hao / Ma, Wujun / Korpelainen, Helena / Li, Chunyang et al. | 2012
- 5827
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In-Depth Analysis of the Magnaporthe oryzae Conidial ProteomeGokce, Emine / Franck, William L. / Oh, Yeonyee / Dean, Ralph A. / Muddiman, David C. et al. | 2012
- 5836
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Are Gastric Cancer Resection Margin Proteomic Profiles More Similar to Those from Controls or Tumors?Aquino, Priscila F. / Fischer, Juliana S. G. / Neves-Ferreira, Ana G. C. / Perales, Jonas / Domont, Gilberto B. / Araujo, Gabriel D. T. / Barbosa, Valmir C. / Viana, Jucilana / Chalub, Sidney R. S. / Lima de Souza, Antonia Q. et al. | 2012
- 5843
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Proteome Analysis of Cry4Ba Toxin-interacting Aedes aegypti Lipid Rafts using geLC–MS/MSBayyareddy, Krishnareddy / Zhu, Xiang / Orlando, Ron / Adang, Michael J. et al. | 2012
- 5856
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Metabolic Perturbance in Autism Spectrum Disorders: A Metabolomics StudyMing, Xue / Stein, T. Peter / Barnes, Virginia / Rhodes, Nelson / Guo, Lining et al. | 2012
- 5863
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Characterizing Kiwifruit Carbohydrate Utilization in vitro and its Consequences for Human Faecal MicrobiotaRosendale, Douglas I. / Blatchford, Paul A. / Sims, Ian M. / Parkar, Shanthi G. / Carnachan, Susan M. / Hedderley, Duncan / Ansell, Juliet et al. | 2012
- 5876
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Proteomics and in Silico Approaches To Extend Understanding of the Glutathione Transferase Superfamily of the Tropical Liver Fluke Fasciola giganticaMorphew, Russell M. / Eccleston, Neil / Wilkinson, Toby J. / McGarry, John / Perally, Samirah / Prescott, Mark / Ward, Deborah / Williams, Diana / Paterson, Steve / Raman, M. et al. | 2012
- 5890
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Proteomic Profiling of Breast Tissue Collagens and Site-specific Characterization of Hydroxyproline Residues of Collagen Alpha-1-(I)Montgomery, Helen / Rustogi, Nitin / Hadjisavvas, Andreas / Tanaka, Koichi / Kyriacou, Kyriacos / Sutton, Chris W. et al. | 2012
- 5890
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Proteomic Profiling of Breast Tissue Collagens and Site-specific Characterization of Hydroxyproline Residues of Collagen Alpa-1-(I)Montgomery, H. / Rustogi, N. / Hadjisavvas, A. / Tanaka, K. / Kyriacou, K. / Sutton, C.W. et al. | 2012
- 5903
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Metabonomic Profiling of TASTPM Transgenic Alzheimer’s Disease Mouse ModelHu, Ze-Ping / Browne, Edward R. / Liu, Tao / Angel, Thomas E / Ho, Paul C. / Chan, Eric Chun Yong et al. | 2012
- 5914
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LC–MS Based Serum Metabolomics for Identification of Hepatocellular Carcinoma Biomarkers in Egyptian CohortXiao, Jun Feng / Varghese, Rency S. / Zhou, Bin / Nezami Ranjbar, Mohammad R. / Zhao, Yi / Tsai, Tsung-Heng / Di Poto, Cristina / Wang, Jinlian / Goerlitz, David / Luo, Yue et al. | 2012
- 5924
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Effects of Dietary Fiber on the Feline Gastrointestinal MetagenomeBarry, Kathleen A. / Middelbos, Ingmar S. / Vester Boler, Brittany M. / Dowd, Scot E. / Suchodolski, Jan S. / Henrissat, Bernard / Coutinho, Pedro M. / White, Bryan A. / Fahey, George C. / Swanson, Kelly S. et al. | 2012
- 5934
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Metabolic Response to Oral Microcystin-LR Exposure in the Rat by NMR-Based Metabonomic StudyHe, Jun / Chen, Jun / Wu, Laiyan / Li, Guangyu / Xie, Ping et al. | 2012
- 5947
-
Assessment of Two Immunodepletion Methods: Off-Target Effects and Variations in Immunodepletion Efficiency May Confound Plasma ProteomicsPatel, Bhavinkumar B. / Barrero, Carlos A. / Braverman, Alan / Kim, Phillip D. / Jones, Kelly A. / Chen, Dian Er / Bowler, Russell P. / Merali, Salim / Kelsen, Steven G. / Yeung, Anthony T. et al. | 2012
- 5959
-
HILIC- and SCX-Based Quantitative Proteomics of Chlamydomonas reinhardtii during Nitrogen Starvation Induced Lipid and Carbohydrate AccumulationLongworth, Joseph / Noirel, Josselin / Pandhal, Jagroop / Wright, Phillip C. / Vaidyanathan, Seetharaman et al. | 2012
- 5959
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HILIC- and SCX-Based Quantitative Proteomics of Chiamydomonas reinhardtii during Nitrogen Starvation Induced Lipid and Carbohydrate AccumulationLongworth, J. / Noirel, J. / Pandhal, J. / Wright, P.C. / Vaidyanathan, S. et al. | 2012
- 5972
-
Self-assembled Protein Arrays from an Ornithodoros moubata Salivary Gland Expression LibraryManzano-Román, Raul / Díaz-Martín, Veronica / González-González, Maria / Matarraz, Sergio / Álvarez-Prado, Angel Francisco / LaBaer, Joshua / Orfao, Alberto / Pérez-Sánchez, Ricardo / Fuentes, Manuel et al. | 2012
- 5983
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Discrimination of Differentially Inhibited Cysteine Proteases by Activity-Based Profiling Using Cystatin Variants with Tailored SpecificitiesSainsbury, Frank / Rhéaume, Ann-Julie / Goulet, Marie-Claire / Vorster, Juan / Michaud, Dominique et al. | 2012
- 5994
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Mass Spectrometry-Based Identification of Native Cardiac Nav1.5 Channel α Subunit Phosphorylation SitesMarionneau, Céline / Lichti, Cheryl F. / Lindenbaum, Pierre / Charpentier, Flavien / Nerbonne, Jeanne M / Townsend, R. Reid / Mérot, Jean et al. | 2012
- 5994
-
Mass Spectrometry-Based Identification of Native Cardiac Nav1.5 Channel alpha Subunit Phosphorylation SitesMarionneau, C. / Lichti, C.F. / Lindenbaum, P. / Charpentier, F. / Nerbonne, J.M. / Townsend, R.R. / Merot, J. et al. | 2012
- 6008
-
Coupling a Detergent Lysis/Cleanup Methodology with Intact Protein Fractionation for Enhanced Proteome CharacterizationSharma, Ritin / Dill, Brian D. / Chourey, Karuna / Shah, Manesh / VerBerkmoes, Nathan C. / Hettich, Robert L. et al. | 2012
- 6019
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Identification of Potential Pathways Involved in Induction of Apoptosis by Butyrate and 4‑Benzoylbutyrate in HT29 Colorectal Cancer CellsFung, Kim Y. C. / Ooi, Cheng Cheng / Lewanowitsch, Tanya / Tan, Sandra / Tan, Hwee Tong / Lim, Teck Kwang / Lin, Qingsong / Williams, Desmond B. / Lockett, Trevor J. / Cosgrove, Leah J. et al. | 2012
- 6030
-
Extracting Time-dependent Obese-diabetic Specific Networks in Hepatic Proteome AnalysisMidha, Mukul K. / Tikoo, Kamiya / Sinha, Neeraj / Kaur, Simarjeet / Verma, Hirdya N. / Rao, Kanury V. S. / Chatterjee, Samrat / Manivel, Venkatasamy et al. | 2012
- 6044
-
Evaluation of Database Search Programs for Accurate Detection of Neuropeptides in Tandem Mass Spectrometry ExperimentsAkhtar, Malik N. / Southey, Bruce R. / Andrén, Per E. / Sweedler, Jonathan V. / Rodriguez-Zas, Sandra L. et al. | 2012
- 6056
-
EnzymePredictor: A Tool for Predicting and Visualizing Enzymatic Cleavages of Digested ProteinsVijayakumar, Vaishnavi / Guerrero, Andrés N. / Davey, Norman / Lebrilla, Carlito B. / Shields, Denis C. / Khaldi, Nora et al. | 2012
- 6066
-
Proteomics Reveals the Effects of Salicylic Acid on Growth and Tolerance to Subsequent Drought Stress in WheatKang, Guozhang / Li, Gezi / Xu, Wei / Peng, Xiaoqi / Han, Qiaoxia / Zhu, Yunji / Guo, Tiancai et al. | 2012
- 6066
-
Proteomics Reveals the Effects of Salicyclic Acid on Growth and Tolerance to Subsequent Drought Stress in WheatKang, G. / Li, G. / Xu, W. / Peng, X. / Han, Q. / Zhu, Y. / Guo, T. et al. | 2012
- 6080
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Spatial Distribution of Cellular Function: The Partitioning of Proteins between Mitochondria and the Nucleus in MCF7 Breast Cancer CellsQattan, Amal T. / Radulovic, Marko / Crawford, Mark / Godovac-Zimmermann, Jasminka et al. | 2012
- 6102
-
Ion Mobility-Mass Spectrometry Analysis of Serum N‑linked Glycans from Esophageal Adenocarcinoma PhenotypesGaye, M. M. / Valentine, S. J. / Hu, Y. / Mirjankar, N. / Hammoud, Z. T. / Mechref, Y. / Lavine, B. K. / Clemmer, D. E. et al. | 2012
- 6111
-
Proteomic Profile Identifies Dysregulated Pathways in Cornelia de Lange Syndrome Cells with Distinct Mutations in SMC1A and SMC3 GenesGimigliano, Anna / Mannini, Linda / Bianchi, Laura / Puglia, Michele / Deardorff, Matthew A. / Menga, Stefania / Krantz, Ian D. / Musio, Antonio / Bini, Luca et al. | 2012
- 6111
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Proteomic Profile Identifies Dysregulated Pathways in Cornella de Lange Syndrome Cells with Distinct Mutations in SMC1A and SMC3 GenesGimigliano, A. / Mannini, L. / Bianchi, L. / Puglia, M. / Deardorff, M.A. / Menga, S. / Krantz, I.D. / Musio, A. / Bini, L. et al. | 2012
- 6124
-
Comprehensive Profiles of Human Milk Oligosaccharides Yield Highly Sensitive and Specific Markers for Determining Secretor Status in Lactating MothersTotten, Sarah M. / Zivkovic, Angela M. / Wu, Shuai / Ngyuen, UyenThao / Freeman, Samara L. / Ruhaak, L. Renee / Darboe, Momodou K. / German, J. Bruce / Prentice, Andrew M. / Lebrilla, Carlito B. et al. | 2012
- 6134
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Association of Connexin43 with E3 Ubiquitin Ligase TRIM21 Reveals a Mechanism for Gap Junction Phosphodegron ControlChen, Vincent C. / Kristensen, Anders R. / Foster, Leonard J. / Naus, Christian C. et al. | 2012
- 6147
-
Detection and Identification of Heme c‑Modified Peptides by Histidine Affinity Chromatography, High-Performance Liquid Chromatography–Mass Spectrometry, and Database SearchingMerkley, Eric D. / Anderson, Brian J. / Park, Jea / Belchik, Sara M. / Shi, Liang / Monroe, Matthew E. / Smith, Richard D. / Lipton, Mary S. et al. | 2012
- 6159
-
Longitudinal Characterization of the Brain Proteomes for the Tg2576 Amyloid Mouse Model Using Shotgun Based Mass SpectrometryShevchenko, Ganna / Wetterhall, Magnus / Bergquist, Jonas / Höglund, Kina / Andersson, Lars I. / Kultima, Kim et al. | 2012
- 6175
-
Identifying the CHO Secretome using Mucin-type O‑Linked Glycosylation and Click-chemistrySlade, Peter G. / Hajivandi, Mahbod / Bartel, Cheryl Moody / Gorfien, Stephen F. et al. | 2012
- 6187
-
PKC-Mediated USP Phosphorylation at Ser35 Modulates 20-Hydroxyecdysone Signaling in DrosophilaWang, Sheng / Wang, Jiawan / Sun, Yaning / Song, Qisheng / Li, Sheng et al. | 2012
- 6197
-
Venomic and Transcriptomic Analysis of Centipede Scolopendra subspinipes dehaaniLiu, Zi-Chao / Zhang, Rong / Zhao, Feng / Chen, Zhong-Ming / Liu, Hao-Wen / Wang, Yan-Jie / Jiang, Ping / Zhang, Yong / Wu, Ying / Ding, Jiu-Ping et al. | 2012
- 6213
-
Composition and Antimicrobial Activity of the Skin Peptidome of Russian Brown Frog Rana temporariaSamgina, T. Yu. / Vorontsov, E. A / Gorshkov, V. A. / Hakalehto, E. / Hanninen, O. / Zubarev, R. A. / Lebedev, A. T. et al. | 2012
- 6223
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Metabonomics Approach to Assessing the Modulatory Effects of St John’s Wort, Ginsenosides, and Clomipramine in Experimental DepressionWang, Xiaoyan / Zeng, Chuiyu / Lin, Jingchao / Chen, Tianlu / Zhao, Tie / Jia, Zhiying / Xie, Xie / Qiu, Yunping / Su, Mingming / Jiang, Tao et al. | 2012
- 6231
-
Combination of LC–MS- and GC–MS-based Metabolomics to Study the Effect of Ozonated Autohemotherapy on Human BloodCiborowski, Michal / Lipska, Alina / Godzien, Joanna / Ferrarini, Alessia / Korsak, Jolanta / Radziwon, Piotr / Tomasiak, Marian / Barbas, Coral et al. | 2012
- 6231
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Combination of LC-MS- and GC-MS-based Metabolomics to Study the Effect of Ozonated Autohemotherapy on Humans BloodCiborowski, M. / Lipska, A. / Godzien, J. / Ferrarini, A. / Korsak, J. / Radziwon, P. / Tomasiak, M. / Barbas, C. et al. | 2012
- 6242
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Performance Evaluation of Algorithms for the Classification of Metabolic 1H NMR FingerprintsHochrein, Jochen / Klein, Matthias S. / Zacharias, Helena U. / Li, Juan / Wijffels, Gene / Schirra, Horst Joachim / Spang, Rainer / Oefner, Peter J. / Gronwald, Wolfram et al. | 2012
- 6252
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Specific Dietary Preferences Are Linked to Differing Gut Microbial Metabolic Activity in Response to Dark Chocolate IntakeMartin, Francois-Pierre J. / Montoliu, Ivan / Nagy, Kornél / Moco, Sofia / Collino, Sebastiano / Guy, Philippe / Redeuil, Karine / Scherer, Max / Rezzi, Serge / Kochhar, Sunil et al. | 2012
- 6264
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Proteome Profiling of Flax (Linum usitatissimum) Seed: Characterization of Functional Metabolic Pathways Operating during Seed DevelopmentBarvkar, Vitthal T. / Pardeshi, Varsha C. / Kale, Sandip M. / Kadoo, Narendra Y. / Giri, Ashok P. / Gupta, Vidya S. et al. | 2012
- 6277
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PanelComposer: A Web-Based Panel Construction Tool for Multivariate Analysis of Disease Biomarker CandidatesJeong, Seul-Ki / Na, Keun / Kim, Kwang-Youl / Kim, Hoguen / Paik, Young-Ki et al. | 2012
- 6282
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Cloud CPFP: A Shotgun Proteomics Data Analysis Pipeline Using Cloud and High Performance ComputingTrudgian, David C. / Mirzaei, Hamid et al. | 2012
- 6291
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Chicken Immune Responses to Variations in Human Plasma Protein Ratios: A Rationale for Polyclonal IgY UltraimmunodepletionTan, Sock Hwee / Kapur, Amit / Baker, Mark S. et al. | 2012