Analyzing the forces binding a restriction endonuclease to DNA using a synthetic nanopore (English)
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- New search for: Dorvel, B.
- New search for: Sigalov, G.
- New search for: Zhao, Q.
- New search for: Comer, J.
- New search for: Dimitrov, V.
- New search for: Mirsaidov, U.
- New search for: Aksimentiev, A.
- New search for: Timp, G.
- New search for: Dorvel, B.
- New search for: Sigalov, G.
- New search for: Zhao, Q.
- New search for: Comer, J.
- New search for: Dimitrov, V.
- New search for: Mirsaidov, U.
- New search for: Aksimentiev, A.
- New search for: Timp, G.
In:
Nucleic acids research
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37
, 12
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4170-
;
2009
- Article (Journal) / Electronic Resource
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Title:Analyzing the forces binding a restriction endonuclease to DNA using a synthetic nanopore
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Contributors:Dorvel, B. ( author ) / Sigalov, G. ( author ) / Zhao, Q. ( author ) / Comer, J. ( author ) / Dimitrov, V. ( author ) / Mirsaidov, U. ( author ) / Aksimentiev, A. ( author ) / Timp, G. ( author )
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Published in:Nucleic acids research ; 37, 12 ; 4170-
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Publisher:
- New search for: Oxford University Press
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Publication date:2009-07-01
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ISSN:
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DOI:
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Type of media:Article (Journal)
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Type of material:Electronic Resource
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Language:English
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Source:
Table of contents – Volume 37, Issue 12
The tables of contents are generated automatically and are based on the data records of the individual contributions available in the index of the TIB portal. The display of the Tables of Contents may therefore be incomplete.
- 3829
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High-resolution genome-wide cytosine methylation profiling with simultaneous copy number analysis and optimization for limited cell numbersOda, Mayumi / Glass, Jacob L. / Thompson, Reid F. / Mo, Yongkai / Olivier, Emmanuel N. / Figueroa, Maria E. / Selzer, Rebecca R. / Richmond, Todd A. / Zhang, Xinmin / Dannenberg, Luke et al. | 2009
- 3840
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A genome-wide screen for essential yeast genes that affect telomere length maintenanceUngar, Lior / Yosef, Nir / Sela, Yael / Sharan, Roded / Ruppin, Eytan / Kupiec, Martin et al. | 2009
- 3850
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Oligonucleotides suppress PKB/Akt and act as superinductors of apoptosis in human keratinocytesKippenberger, Stefan / Müller, Jutta / Schultz, Maike / Dorn, Annette / Bock, Andreas / Aygün, Hüseyin / Thaçi, Diamant / Hofmann, Matthias / Kaufmann, Roland / Bernd, August et al. | 2009
- 3865
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Structural basis for m7G-cap hypermethylation of small nuclear, small nucleolar and telomerase RNA by the dimethyltransferase TGS1Monecke, Thomas / Dickmanns, Achim / Ficner, Ralf et al. | 2009
- 3878
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IHF-binding sites inhibit DNA loop formation and transcription initiationHuo, Yi-Xin / Zhang, Yuan-Tao / Xiao, Yan / Zhang, Xiaodong / Buck, Martin / Kolb, Annie / Wang, Yi-Ping et al. | 2009
- 3887
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Both helix topology and counterion distribution contribute to the more effective charge screening in dsRNA compared with dsDNAPabit, Suzette A. / Qiu, Xiangyun / Lamb, Jessica S. / Li, Li / Meisburger, Steve P. / Pollack, Lois et al. | 2009
- 3897
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Remodeling of chromatin structure within the promoter is important for bmp-2-induced fgfr3 expressionSun, Fenyong / Chen, Qiongyu / Yang, Songhai / Pan, Qiuhui / Ma, Ji / Wan, Yang / Chang, Chih-Hao / Hong, An et al. | 2009
- 3912
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Cellular responses to DNA double-strand breaks after low-dose g-irradiationAsaithamby, A. / Chen, D. J. et al. | 2009
- 3912
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Cellular responses to DNA double-strand breaks after low-dose {gamma}-irradiationAsaithamby, Aroumougame / Chen, David J. et al. | 2009
- 3924
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Highly efficient incorporation of the fluorescent nucleotide analogs tC and tCO by Klenow fragmentSandin, Peter / Stengel, Gudrun / Ljungdahl, Thomas / Börjesson, Karl / Macao, Bertil / Wilhelmsson, L. Marcus et al. | 2009
- 3934
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S-Adenosyl homocysteine and DNA ends stimulate promiscuous nuclease activities in the Type III restriction endonuclease EcoPIPeakman, Luke J. / Szczelkun, Mark D. et al. | 2009
- 3946
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Identification of Apurinic/apyrimidinic endonuclease 1 (APE1) as the endoribonuclease that cleaves c-myc mRNABarnes, Tavish / Kim, Wan-Cheol / Mantha, Anil K. / Kim, Sang-Eun / Izumi, Tadahide / Mitra, Sankar / Lee, Chow H. et al. | 2009
- 3959
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The ATR-Chk1 pathway plays a role in the generation of centrosome aberrations induced by Rad51C dysfunctionKatsura, Mari / Tsuruga, Takanori / Date, Osamu / Yoshihara, Takashi / Ishida, Mari / Tomoda, Yoshitaka / Okajima, Miyuki / Takaku, Motoki / Kurumizaka, Hitoshi / Kinomura, Aiko et al. | 2009
- 3969
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A glycolytic burst drives glucose induction of global histone acetylation by picNuA4 and SAGAFriis, R. Magnus N. / Wu, Bob P. / Reinke, Stacey N. / Hockman, Darren J. / Sykes, Brian D. / Schultz, Michael C. et al. | 2009
- 3981
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One RNA plays three roles to provide catalytic activity to a group I intron lacking an endogenous internal guide sequenceVaidya, Nilesh / Lehman, Niles et al. | 2009
- 3990
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Folding of the cocaine aptamer studied by EPR and fluorescence spectroscopies using the bifunctional spectroscopic probe CCekan, Pavol / Jonsson, Elvar Örn / Sigurdsson, Snorri Th. et al. | 2009
- 3996
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FHL2 interacts with and acts as a functional repressor of Id2 in human neuroblastoma cellsHan, Weidong / Wu, Zhiqiang / Zhao, Yali / Meng, Yuanguang / Si, Yiling / Yang, Jie / Fu, Xiaobing / Yu, Li et al. | 2009
- 4010
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Comprehensive prediction of novel microRNA targets in Arabidopsis thalianaAlves-Junior, Leonardo / Niemeier, Sandra / Hauenschild, Arne / Rehmsmeier, Marc / Merkle, Thomas et al. | 2009
- 4022
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One RNA aptamer sequence, two structures: a collaborating pair that inhibits AMPA receptorsHuang, Zhen / Pei, Weimin / Han, Yan / Jayaseelan, Sabarinath / Shekhtman, Alexander / Shi, Hua / Niu, Li et al. | 2009
- 4033
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Contribution of ribosomal residues to P-site tRNA bindingShoji, Shinichiro / Abdi, Nimo M. / Bundschuh, Ralf / Fredrick, Kurt et al. | 2009
- 4043
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Structural and dynamic characterization of the upper part of the HIV-1 cTAR DNA hairpinZargarian, Loussiné / Kanevsky, Igor / Bazzi, Ali / Boynard, Jonathan / Chaminade, Françoise / Fossé, Philippe / Mauffret, Olivier et al. | 2009
- 4055
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Requirement for XLF/Cernunnos in alignment-based gap filling by DNA polymerases l and m for nonhomologous end joining in human whole-cell extractsAkopiants, K. / Zhou, R. Z. / Mohapatra, S. / Valerie, K. / Lees-Miller, S. P. / Lee, K. J. / Chen, D. J. / Revy, P. / de Villartay, J. P. / Povirk, L. F. et al. | 2009
- 4055
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Requirement for XLF/Cernunnos in alignment-based gap filling by DNA polymerases {lambda} and {micro} for nonhomologous end joining in human whole-cell extractsAkopiants, Konstantin / Zhou, Rui-Zhe / Mohapatra, Susovan / Valerie, Kristoffer / Lees-Miller, Susan P. / Lee, Kyung-Jong / Chen, David J. / Revy, Patrick / de Villartay, Jean-Pierre / Povirk, Lawrence F. et al. | 2009
- 4063
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Stochastic sampling of the RNA structural alignment spaceHarmanci, Arif Ozgun / Sharma, Gaurav / Mathews, David H. et al. | 2009
- 4076
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Experimentally based contact energies decode interactions responsible for protein-DNA affinity and the role of molecular waters at the binding interfaceTemiz, N. Alpay / Camacho, Carlos J. et al. | 2009
- 4089
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Dynamics of RecA filaments on single-stranded DNAvan Loenhout, Marijn T. J. / van der Heijden, Thijn / Kanaar, Roland / Wyman, Claire / Dekker, Cees et al. | 2009
- 4100
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Molecular characterization of SMILE as a novel corepressor of nuclear receptorsXie, Yuan-Bin / Nedumaran, Balachandar / Choi, Hueng-Sik et al. | 2009
- 4116
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Functional mapping of the interaction between TDP-43 and hnRNP A2 in vivoDAmbrogio, Andrea / Buratti, Emanuele / Stuani, Cristiana / Guarnaccia, Corrado / Romano, Maurizio / Ayala, Youhna M. / Baralle, Francisco E. et al. | 2009
- 4127
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The formation pathway of i-motif tetramersLeroy, Jean-Louis et al. | 2009
- 4135
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Long-range activation of FKBP51 transcription by the androgen receptor via distal intronic enhancersMakkonen, Harri / Kauhanen, Miia / Paakinaho, Ville / Jääskeläinen, Tiina / Palvimo, Jorma J. et al. | 2009
- 4149
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Structural insights into CUG repeats containing the 'stretched U-U wobble': implications for myotonic dystrophyKiliszek, Agnieszka / Kierzek, Ryszard / Krzyzosiak, Wlodzimierz J. / Rypniewski, Wojciech et al. | 2009
- 4157
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Bacillus subtilis polynucleotide phosphorylase 3'-to-5' DNase activity is involved in DNA repairCardenas, Paula P. / Carrasco, Begoña / Sanchez, Humberto / Deikus, Gintaras / Bechhofer, David H / Alonso, Juan C et al. | 2009
- 4157
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Bacillus subtilis polynucleotide phosphorylase 3prime-to-5prime DNase activity is involved in DNA repairCardenas, P. P. / Carrasco, B. / Sanchez, H. / Deikus, G. / Bechhofer, D. H. / Alonso, J. C. et al. | 2009
- 4170
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Analyzing the forces binding a restriction endonuclease to DNA using a synthetic nanoporeDorvel, B. / Sigalov, G. / Zhao, Q. / Comer, J. / Dimitrov, V. / Mirsaidov, U. / Aksimentiev, A. / Timp, G. et al. | 2009
- e84
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p53-dependent antiviral RNA-interference facilitates tumor-selective viral replicationGürlevik, Engin / Woller, Norman / Schache, Peter / Malek, Nisar P. / Wirth, Thomas C. / Zender, Lars / Manns, Michael P. / Kubicka, Stefan / Kühnel, Florian et al. | 2009
- e85
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Identification of candidate regulatory SNPs by combination of transcription-factor-binding site prediction, SNP genotyping and haploChIPAmeur, Adam / Rada-Iglesias, Alvaro / Komorowski, Jan / Wadelius, Claes et al. | 2009
- e86
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Quantitative evaluation of DNA methylation by optimization of a differential-high resolution melt analysis protocolMalentacchi, Francesca / Forni, Giulia / Vinci, Serena / Orlando, Claudio et al. | 2009
- e87
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In silico selection of RNA aptamersChushak, Yaroslav / Stone, Morley O. et al. | 2009
- e88
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A complex-centric view of protein network evolutionYosef, Nir / Kupiec, Martin / Ruppin, Eytan / Sharan, Roded et al. | 2009
- e89
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Methylation detection oligonucleotide microarray analysis: a high-resolution method for detection of CpG island methylationKamalakaran, Sitharthan / Kendall, Jude / Zhao, Xiaoyue / Tang, Chunlao / Khan, Sohail / Ravi, Kandasamy / Auletta, Theresa / Riggs, Michael / Wang, Yun / Helland, Åslaug et al. | 2009
- e90
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Using high-density exon arrays to profile gene expression in closely related speciesLin, Lan / Liu, Song / Brockway, Heather / Seok, Junhee / Jiang, Peng / Wong, Wing Hung / Xing, Yi et al. | 2009
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