Ancestry Inference in Complex Admixtures via Variable-Length Markov Chain Linkage Models (English)
- New search for: Bercovici, Sivan
- New search for: Rodriguez, Jesse M.
- New search for: Elmore, Megan
- New search for: Batzoglou, Serafim
- New search for: Bercovici, Sivan
- New search for: Rodriguez, Jesse M.
- New search for: Elmore, Megan
- New search for: Batzoglou, Serafim
In:
RECOMB, Annual International Conference on Research in Computational Molecular Biology, 16
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12-28
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2012
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ISSN:
- Conference paper / Print
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Title:Ancestry Inference in Complex Admixtures via Variable-Length Markov Chain Linkage Models
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Contributors:Bercovici, Sivan ( author ) / Rodriguez, Jesse M. ( author ) / Elmore, Megan ( author ) / Batzoglou, Serafim ( author )
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Published in:Lecture Notes in Computer Science ; 7262 ; 12-28
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Publisher:
- New search for: Springer Berlin Heidelberg
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Place of publication:Berlin, Heidelberg
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Publication date:2012
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Size:17 Seiten
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ISBN:
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ISSN:
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DOI:
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Type of media:Conference paper
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Type of material:Print
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Language:English
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Keywords:
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Source:
Table of contents conference proceedings
The tables of contents are generated automatically and are based on the data records of the individual contributions available in the index of the TIB portal. The display of the Tables of Contents may therefore be incomplete.
- 1
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Protein Structure by Semidefinite Facial ReductionAlipanahi, B. / Krislock, N. / Ghodsi, A. / Wolkowicz, H. / Donaldson, L. / Li, M. et al. | 2012
- 12
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Ancestry Inference in Complex Admixtures via Variable-Length Markov Chain Linkage ModelsBercovici, S. / Rodriguez, J.M. / Elmore, M. / Batzoglou, S. et al. | 2012
- 29
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Charge Group Partitioning in Biomolecular SimulationCanzar, S. / El-Kebir, M. / Pool, R. / Elbassioni, K. / Malde, A.K. / Mark, A.E. / Geerke, D.P. / Stougie, L. / Klau, G.W. et al. | 2012
- 44
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Increased Methylation Variation in Epigenetic Domains across Cancer TypesBravo, H.C. et al. | 2012
- 45
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Estimating the Accuracy of Multiple Alignments and its Use in Parameter AdvisingDeBlasio, D.F. / Wheeler, T.J. / Kececioglu, J.D. et al. | 2012
- 60
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Quantifying the Dynamics of Coupled Networks of Switches and OscillatorsFrancis, M.R. / Fertig, E.J. et al. | 2012
- 62
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lobSTR: A Short Tandem Repeat Profiler for Personal GenomesGymrek, M. / Golan, D. / Rosset, S. / Erlich, Y. et al. | 2012
- 64
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Hap-seq: An Optimal Algorithm for Haplotype Phasing with Imputation Using Sequencing DataHe, D. / Han, B. / Eskin, E. et al. | 2012
- 79
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Ballast: A Ball-Based Algorithm for Structural MotifsHe, L. / Vandin, F. / Pandurangan, G. / Bailey-Kellogg, C. et al. | 2012
- 94
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Evolution of Genome Organization by Duplication and Loss: An Alignment ApproachHolloway, P. / Swenson, K. / Ardell, D. / El-Mabrouk, N. et al. | 2012
- 113
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LoopWeaver - Loop Modeling by the Weighted Scaling of Verified ProteinsHoltby, D. / Li, S.C. / Li, M. et al. | 2012
- 127
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A Robust Method for Transcript Quantification with RNA-seq DataHuang, Y. / Hu, Y. / Jones, C.D. / MacLeod, J.N. / Chiang, D.Y. / Liu, Y. / Prins, J.F. / Liu, J. et al. | 2012
- 148
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Modeling the Breakage-Fusion-Bridge Mechanism: Combinatorics and Cancer GenomicsKinsella, M. / Bafna, V. et al. | 2012
- 163
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TrueSight: Self-training Algorithm for Splice Junction Detection Using RNA-seqLi, Y. / Li, H.-M. / Burns, P. / Borodovsky, M. / Robinson, G.E. / Ma, J. et al. | 2012
- 165
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Synthetic Sequence Design for Signal Location SearchLin, Y.-L. / Ward, C. / Skiena, S. et al. | 2012
- 180
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The Three-Dimensional Architecture of a Bacterial Genome and Its Alteration by Genetic PerturbationMarti-Renom, M.A. et al. | 2012
- 181
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Discovery of Complex Genomic Rearrangements in Cancer Using High-Throughput SequencingMcPherson, A. / Wu, C. / Wyatt, A. / Shah, S. / Collins, C. / Sahinalp, S.C. et al. | 2012
- 183
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Network-Based Prediction and Analysis of HIV Dependency FactorsMurali, T.M. / Dyer, M.D. / Badger, D. / Tyler, B.M. / Katze, M.G. et al. | 2012
- 184
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Structure-Guided Deimmunization of Therapeutic ProteinsParker, A.S. / Griswold, K.E. / Bailey-Kellogg, C. et al. | 2012
- 199
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Evidence for Widespread Association of Mammalian Splicing and Conserved Long-Range RNA StructuresPervouchine, D. / Khrameeva, E. / Pichugina, M. / Nikolaienko, O. / Gelfand, M. / Rubtsov, P. / Mironov, A. et al. | 2012
- 200
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Pathset Graphs: A Novel Approach for Comprehensive Utilization of Paired Reads in Genome AssemblyPham, S.K. / Antipov, D. / Sirotkin, A. / Tesler, G. / Pevzner, P.A. / Alekseyev, M.A. et al. | 2012
- 213
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Finding Maximum Colorful Subtrees in PracticeRauf, I. / Rasche, F. / Nicolas, F. / Bocker, S. et al. | 2012
- 224
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Recovering the Tree-Like Trend of Evolution Despite Extensive Lateral Genetic Transfer: A Probabilistic AnalysisRoch, S. / Snir, S. et al. | 2012
- 239
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RESQUE: Network Reduction Using Semi-Markov Random Walk Scores for Efficient Querying of Biological Networks (Extended Abstract)Sahraeian, S.M.E. / Yoon, B.-J. et al. | 2012
- 241
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Detecting SNP-Induced Structural Changes in RNA: Application to Disease StudiesSalari, R. / Kimchi-Sarfaty, C. / Gottesman, M.M. / Przytycka, T.M. et al. | 2012
- 244
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A Model for Biased Fractionation after Whole Genome DuplicationSankoff, D. / Zheng, C. / Wang, B. et al. | 2012
- 245
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Exact Pattern Matching for RNA Structure EnsemblesSchmiedl, C. / Mohl, M. / Heyne, S. / Amit, M. / Landau, G.M. / Will, S. / Backofen, R. et al. | 2012
- 261
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Reconstructing Boolean Models of SignalingSharan, R. / Karp, R.M. et al. | 2012
- 272
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Alignment-Free Sequence Comparison Based on Next Generation Sequencing Reads: Extended AbstractSong, K. / Ren, J. / Zhai, Z. / Liu, X. / Deng, M. / Sun, F. et al. | 2012
- 286
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Differential Oestrogen Receptor Binding is Associated with Clinical Outcome in Breast CancerStark, R. et al. | 2012
- 287
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Simultaneous Reconstruction of Multiple Signaling Pathways via the Prize-Collecting Steiner Forest ProblemTuncbag, N. / Braunstein, A. / Pagnani, A. / Huang, S.-S.C. / Chayes, J. / Borgs, C. / Zecchina, R. / Fraenkel, E. et al. | 2012
- 302
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Function-Function Correlated Multi-Label Protein Function Prediction over Interaction NetworksWang, H. / Huang, H. / Ding, C. et al. | 2012
- 314
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Predicting Protein-Protein Interactions from Multimodal Biological Data Sources via Nonnegative Matrix Tri-FactorizationWang, H. / Huang, H. / Ding, C. / Nie, F. et al. | 2012
- 326
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CNVeM: Copy Number Variation Detection Using Uncertainty of Read MappingWang, Z. / Hormozdiari, F. / Yang, W.-Y. / Halperin, E. / Eskin, E. et al. | 2012
- 341
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Structure-Based Whole Genome Realignment Reveals Many Novel Non-coding RNAsWill, S. / Yu, M. / Berger, B. et al. | 2012
- 342
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Probabilistic Inference of Viral Quasispecies Subject to RecombinationZagordi, O. / Topfer, A. / Prabhakaran, S. / Roth, V. / Halperin, E. / Beerenwinkel, N. et al. | 2012
- 355
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Simultaneously Learning DNA Motif along with Its Position and Sequence Rank Preferences through EM AlgorithmZhang, Z. / Chang, C.W. / Hugo, W. / Cheung, E. / Sung, W.-K. et al. | 2012