Accurate Bayesian inference of sex chromosome karyotypes and sex‐linked scaffolds from low‐depth sequencing data (English)
- New search for: Caduff, Madleina
- New search for: Eckel, Raphael
- New search for: Leuenberger, Christoph
- New search for: Wegmann, Daniel
- New search for: Caduff, Madleina
- New search for: Eckel, Raphael
- New search for: Leuenberger, Christoph
- New search for: Wegmann, Daniel
In:
Molecular Ecology Resources
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24
, 3
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2024
- Article (Journal) / Electronic Resource
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Title:Accurate Bayesian inference of sex chromosome karyotypes and sex‐linked scaffolds from low‐depth sequencing data
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Contributors:Caduff, Madleina ( author ) / Eckel, Raphael ( author ) / Leuenberger, Christoph ( author ) / Wegmann, Daniel ( author )
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Published in:Molecular Ecology Resources ; 24, 3
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Publisher:
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Publication date:2024-04-01
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Size:15 pages
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ISSN:
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DOI:
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Type of media:Article (Journal)
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Type of material:Electronic Resource
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Language:English
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Keywords:
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Source:
Table of contents – Volume 24, Issue 3
The tables of contents are generated automatically and are based on the data records of the individual contributions available in the index of the TIB portal. The display of the Tables of Contents may therefore be incomplete.
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GeneMiner: A tool for extracting phylogenetic markers from next‐generation sequencing dataXie, Pulin / Guo, Yongling / Teng, Yue / Zhou, Wenbin / Yu, Yan et al. | 2024
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High‐quality haplotype‐resolved genome assembly for ring‐cup oak (Quercus glauca) provides insight into oaks demographic dynamicsLuo, Chang‐Sha / Li, Tian‐Tian / Jiang, Xiao‐Long / Song, Ying / Fan, Ting‐Ting / Shen, Xiang‐Bao / Yi, Rong / Ao, Xiao‐Ping / Xu, Gang‐Biao / Deng, Min et al. | 2024
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slimr: An R package for tailor‐made integrations of data in population genomic simulations over space and timeDinnage, Russell / Sarre, Stephen D. / Duncan, Richard P. / Dickman, Christopher R. / Edwards, Scott V. / Greenville, Aaron C. / Wardle, Glenda M. / Gruber, Bernd et al. | 2024
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Potential PCR amplification bias in identifying complex ecological patterns: Higher species compositional homogeneity revealed in smaller‐size coral reef zooplankton by metatranscriptomicsMattos, Felipe M. G. / Dreyer, Niklas / Fong, Chia‐Ling / Wen, Yung‐Hui Victoria / Jain, Dharmesh / De Vivo, Mattia / Huang, Yu‐Sin / Mwihaki, John Karichu / Wang, Tzi‐Yuan / Ho, Ming‐Jay et al. | 2024
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Population genetic simulation: Benchmarking frameworks for non‐standard models of natural selectionJohnson, Olivia L. / Tobler, Raymond / Schmidt, Joshua M. / Huber, Christian D. et al. | 2024
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Delimiting the rare, endangered and actively speciatingMartinet, Kristen M. / Harmon, Luke J. et al. | 2024
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Accurate Bayesian inference of sex chromosome karyotypes and sex‐linked scaffolds from low‐depth sequencing dataCaduff, Madleina / Eckel, Raphael / Leuenberger, Christoph / Wegmann, Daniel et al. | 2024
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A CRISPR‐based strategy for targeted sequencing in biodiversity scienceLittleford‐Colquhoun, Bethan / Kartzinel, Tyler R. et al. | 2024
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Chromosome‐level genome assembly of the aster leafhopper (Macrosteles quadrilineatus) reveals the role of environment and microbial symbiosis in shaping pest insect genome evolutionVasquez, Yumary M. / Li, Zheng / Xue, Allen Z. / Bennett, Gordon M. et al. | 2024
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Multiplexing PCR allows the identification of within‐species genetic diversity in ancient eDNALammers, Y. / Taberlet, P. / Coissac, E. / Elliott, L. D. / Merkel, M. F. / Pitelkova, I. / Alsos, I. G. / PhyloAlps Consortium / PhyloNorway Consortium et al. | 2024
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Seq2Sat and SatAnalyzer toolkit: Towards comprehensive microsatellite genotyping from sequencing dataLiu, Peng / Wilson, Paul / Redquest, Bridget / Keobouasone, Sonesinh / Manseau, Micheline et al. | 2024
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Individual genotypes from environmental DNA: Fingerprinting snow tracks of three large carnivore speciesDe Barba, Marta / Baur, Molly / Boyer, Frédéric / Fumagalli, Luca / Konec, Marjeta / Miquel, Christian / Pazhenkova, Elena / Remollino, Nadège / Skrbinšek, Tomaž / Stoffel, Céline et al. | 2024
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A cost‐effective blood DNA methylation‐based age estimation method in domestic cats, Tsushima leopard cats (Prionailurus bengalensis euptilurus) and Panthera species, using targeted bisulphite sequencing and machine learning modelsQi, Huiyuan / Lim, Qi Luan / Kinoshita, Kodzue / Nakajima, Nobuyoshi / Inoue‐Murayama, Miho et al. | 2024
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Species delimitation with limited sampling: An example from rare trapdoor spider genus Cyclocosmia (Mygalomorphae, Halonoproctidae)Opatova, Vera / Bourguignon, Kellie / Bond, Jason E. et al. | 2024
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Express barcoding with NextGenPCR and MinION for species‐level sorting of ecological samplesVasilita, Cristina / Feng, Vivian / Hansen, Aslak Kappel / Hartop, Emily / Srivathsan, Amrita / Struijk, Robin / Meier, Rudolf et al. | 2024
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A pan‐genomic approach reveals novel Sulfurimonas clade in the ferruginous meromictic Lake PavinBiderre‐Petit, Corinne / Courtine, Damien / Hennequin, Claire / Galand, Pierre E. / Bertilsson, Stefan / Debroas, Didier / Monjot, Arthur / Lepère, Cécile / Divne, Anna‐Maria / Hochart, Corentin et al. | 2024
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Metazoa‐level USCOs as markers in species delimitation and classificationDietz, Lars / Mayer, Christoph / Stolle, Eckart / Eberle, Jonas / Misof, Bernhard / Podsiadlowski, Lars / Niehuis, Oliver / Ahrens, Dirk et al. | 2024
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Lessons from assembling UCEs: A comparison of common methods and the case of Clavinomia (Halictidae)Bossert, Silas / Pauly, Alain / Danforth, Bryan N. / Orr, Michael C. / Murray, Elizabeth A. et al. | 2024
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A memorial to Professor Louis Bernatchez (1960–2023)| 2024
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Issue Information| 2024