A framework for developing and validating taxon‐specific primers for specimen identification from environmental DNA (English)
- New search for: MacDonald, Anna J.
- New search for: Sarre, Stephen D.
- New search for: MacDonald, Anna J.
- New search for: Sarre, Stephen D.
In:
Molecular Ecology Resources
;
17
, 4
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708-720
;
2017
- Article (Journal) / Electronic Resource
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Title:A framework for developing and validating taxon‐specific primers for specimen identification from environmental DNA
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Contributors:MacDonald, Anna J. ( author ) / Sarre, Stephen D. ( author )
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Published in:Molecular Ecology Resources ; 17, 4 ; 708-720
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Publisher:
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Publication date:2017-07-01
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Size:13 pages
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ISSN:
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DOI:
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Type of media:Article (Journal)
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Type of material:Electronic Resource
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Language:English
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Keywords:
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Source:
Table of contents – Volume 17, Issue 4
The tables of contents are generated automatically and are based on the data records of the individual contributions available in the index of the TIB portal. The display of the Tables of Contents may therefore be incomplete.
- 583
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Small‐ and large‐scale heterogeneity in genetic variation across the collard flycatcher genome: implications for estimating genetic diversity in nonmodel organismsIngvarsson, Pär K. / Wang, Jing et al. | 2017
- 586
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Genomic distribution and estimation of nucleotide diversity in natural populations: perspectives from the collared flycatcher (Ficedula albicollis) genomeDutoit, Ludovic / Burri, Reto / Nater, Alexander / Mugal, Carina F. / Ellegren, Hans et al. | 2017
- 598
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High‐resolution melt analysis without DNA extraction affords rapid genotype resolution and species identificationRugman‐Jones, Paul F. / Stouthamer, Richard et al. | 2017
- 608
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tipdatingbeast: an r package to assist the implementation of phylogenetic tip‐dating tests using beastRieux, Adrien / Khatchikian, Camilo E. et al. | 2017
- 614
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Development of genomic tools in a widespread tropical tree, Symphonia globulifera L.f.: a new low‐coverage draft genome, SNP and SSR markersOlsson, Sanna / Seoane‐Zonjic, Pedro / Bautista, Rocío / Claros, M. Gonzalo / González‐Martínez, Santiago C. / Scotti, Ivan / Scotti‐Saintagne, Caroline / Hardy, Olivier J. / Heuertz, Myriam et al. | 2017
- 631
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PSMC (pairwise sequentially Markovian coalescent) analysis of RAD (restriction site associated DNA) sequencing dataLiu, Shenglin / Hansen, Michael M. et al. | 2017
- 642
-
Testing genotyping strategies for ultra‐deep sequencing of a co‐amplifying gene family: MHC class I in a passerine birdBiedrzycka, Aleksandra / Sebastian, Alvaro / Migalska, Magdalena / Westerdahl, Helena / Radwan, Jacek et al. | 2017
- 656
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Paralogs are revealed by proportion of heterozygotes and deviations in read ratios in genotyping‐by‐sequencing data from natural populationsMcKinney, Garrett J. / Waples, Ryan K. / Seeb, Lisa W. / Seeb, James E. et al. | 2017
- 670
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Identification of sawflies and horntails (Hymenoptera, ‘Symphyta’) through DNA barcodes: successes and caveatsSchmidt, Stefan / Taeger, Andreas / Morinière, Jérôme / Liston, Andrew / Blank, Stephan M. / Kramp, Katja / Kraus, Manfred / Schmidt, Olga / Heibo, Erik / Prous, Marko et al. | 2017
- 686
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Modified low‐salt CTAB extraction of high‐quality DNA from contaminant‐rich tissuesArseneau, Jean‐René / Steeves, Royce / Laflamme, Mark et al. | 2017
- 694
-
A combined field survey and molecular identification protocol for comparing forest arthropod biodiversity across spatial scalesEmerson, Brent C. / Casquet, Juliane / López, Heriberto / Cardoso, Pedro / Borges, Paulo A. V. / Mollaret, Noémy / Oromí, Pedro / Strasberg, Dominique / Thébaud, Christophe et al. | 2017
- 708
-
A framework for developing and validating taxon‐specific primers for specimen identification from environmental DNAMacDonald, Anna J. / Sarre, Stephen D. et al. | 2017
- 721
-
A comparison of DNA extraction methods for high‐throughput DNA analysesSchiebelhut, Lauren M. / Abboud, Sarah S. / Gómez Daglio, Liza E. / Swift, Holly F. / Dawson, Michael N et al. | 2017
- 730
-
ITS all right mama: investigating the formation of chimeric sequences in the ITS2 region by DNA metabarcoding analyses of fungal mock communities of different complexitiesBjørnsgaard Aas, Anders / Davey, Marie Louise / Kauserud, Håvard et al. | 2017
- 742
-
Combining bleach and mild predigestion improves ancient DNA recovery from bonesBoessenkool, Sanne / Hanghøj, Kristian / Nistelberger, Heidi M. / Der Sarkissian, Clio / Gondek, Agata T. / Orlando, Ludovic / Barrett, James H. / Star, Bastiaan et al. | 2017
- 752
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Identifying homomorphic sex chromosomes from wild‐caught adults with limited genomic resourcesBrelsford, Alan / Lavanchy, Guillaume / Sermier, Roberto / Rausch, Anna / Perrin, Nicolas et al. | 2017
- 760
-
Evaluating and optimizing the performance of software commonly used for the taxonomic classification of DNA metabarcoding sequence dataRichardson, Rodney T. / Bengtsson‐Palme, Johan / Johnson, Reed M. et al. | 2017
- 770
-
Controlling for P‐value inflation in allele frequency change in experimental evolution and artificial selection experimentsKemppainen, Petri / Rønning, Bernt / Kvalnes, Thomas / Hagen, Ingerid J. / Ringsby, Thor Harald / Billing, Anna M. / Pärn, Henrik / Lien, Sigbjørn / Husby, Arild / Sæther, Bernt‐Erik et al. | 2017
- 783
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SNPs selected by information content outperform randomly selected microsatellite loci for delineating genetic identification and introgression in the endangered dark European honeybee (Apis mellifera mellifera)Muñoz, Irene / Henriques, Dora / Jara, Laura / Johnston, J. Spencer / Chávez‐Galarza, Julio / De La Rúa, Pilar / Pinto, M. Alice et al. | 2017
- 796
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DNA barcodes of the native ray‐finned fishes in TaiwanChang, Chia‐Hao / Shao, Kwang‐Tsao / Lin, Han‐Yang / Chiu, Yung‐Chieh / Lee, Mao‐Ying / Liu, Shih‐Hui / Lin, Pai‐Lei et al. | 2017
- 806
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Draft genome of the American Eel (Anguilla rostrata)Pavey, Scott A. / Laporte, Martin / Normandeau, Eric / Gaudin, Jérémy / Letourneau, Louis / Boisvert, Sébastien / Corbeil, Jacques / Audet, Céline / Bernatchez, Louis et al. | 2017
- 812
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High phylogenetic utility of an ultraconserved element probe set designed for ArachnidaStarrett, James / Derkarabetian, Shahan / Hedin, Marshal / Bryson, Robert W. Jr. / McCormack, John E. / Faircloth, Brant C. et al. | 2017
- 824
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varver: a database of microsatellite variation in vertebratesYashima, Akiko Sato / Innan, Hideki et al. | 2017