Maximizing fish detection with eDNA metabarcoding (English)
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In:
Environmental DNA
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2
, 4
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493-504
;
2020
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ISSN:
- Article (Journal) / Electronic Resource
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Title:Maximizing fish detection with eDNA metabarcoding
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Contributors:Bessey, Cindy ( author ) / Jarman, Simon N. ( author ) / Berry, Oliver ( author ) / Olsen, Ylva S. ( author ) / Bunce, Michael ( author ) / Simpson, Tiffany ( author ) / Power, Matthew ( author ) / McLaughlin, James ( author ) / Edgar, Graham J. ( author ) / Keesing, John ( author )
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Published in:Environmental DNA ; 2, 4 ; 493-504
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Publisher:
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Publication date:2020-10-01
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Size:12 pages
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ISSN:
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DOI:
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Type of media:Article (Journal)
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Type of material:Electronic Resource
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Language:English
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Keywords:
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Source:
Table of contents – Volume 2, Issue 4
The tables of contents are generated automatically and are based on the data records of the individual contributions available in the index of the TIB portal. The display of the Tables of Contents may therefore be incomplete.
- 389
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Issue Information| 2020
- 391
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Methodological trends and perspectives of animal dietary studies by noninvasive fecal DNA metabarcodingAndo, Haruko / Mukai, Haruka / Komura, Taketo / Dewi, Tungga / Ando, Masaki / Isagi, Yuji et al. | 2020
- 407
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Experimental assessment of optimal lotic eDNA sampling and assay multiplexing for a critically endangered fishWood, Zachary T. / Erdman, Bradley F. / York, Geneva / Trial, Joan G. / Kinnison, Michael T. et al. | 2020
- 418
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Specialized bacteriome uncovered in the coralloid roots of the epiphytic gymnosperm, Zamia pseudoparasiticaBell‐Doyon, Philip / Laroche, Jérôme / Saltonstall, Kristin / Villarreal Aguilar, Juan Carlos et al. | 2020
- 429
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Analysis of a coastal North Sea fish community: Comparison of aquatic environmental DNA concentrations to fish catchesvan Bleijswijk, Judith D. L. / Engelmann, Julia C. / Klunder, Lise / Witte, Harry J. / Witte, Johannes IJ. / van der Veer, Henk W. et al. | 2020
- 446
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A round‐robin evaluation of the repeatability and reproducibility of environmental DNA assays for dreissenid musselsSepulveda, Adam J. / Hutchins, Patrick R. / Jackson, Craig / Ostberg, Carl / Laramie, Matthew B. / Amberg, Jon / Counihan, Tim / Hoegh, Andrew / Pilliod, David S. et al. | 2020
- 460
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Novel universal primers for metabarcoding environmental DNA surveys of marine mammals and other marine vertebratesValsecchi, Elena / Bylemans, Jonas / Goodman, Simon J. / Lombardi, Roberto / Carr, Ian / Castellano, Laura / Galimberti, Andrea / Galli, Paolo et al. | 2020
- 477
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Groundtruthing of pelagic forage fish detected by hydroacoustics in a whale feeding area using environmental DNABerger, Chloé Suzanne / Bougas, Bérénice / Turgeon, Samuel / Ferchiou, Sophia / Ménard, Nadia / Bernatchez, Louis et al. | 2020
- 493
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Maximizing fish detection with eDNA metabarcodingBessey, Cindy / Jarman, Simon N. / Berry, Oliver / Olsen, Ylva S. / Bunce, Michael / Simpson, Tiffany / Power, Matthew / McLaughlin, James / Edgar, Graham J. / Keesing, John et al. | 2020
- 505
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Sedimentary eDNA provides different information on timescale and fish species composition compared with aqueous eDNASakata, Masayuki K. / Yamamoto, Satoshi / Gotoh, Ryo O. / Miya, Masaki / Yamanaka, Hiroki / Minamoto, Toshifumi et al. | 2020
- 519
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The impact of intragenomic rRNA variation on metabarcoding‐derived diversity estimates: A case study from marine nematodesPereira, Tiago José / De Santiago, Alejandro / Schuelke, Taruna / Hardy, Sarah M. / Bik, Holly M. et al. | 2020
- 535
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Describing macroecological patterns in microbes: Approaches for comparative analyses of operational taxonomic unit read number distribution with a case study of global oceanic bacteriaNakadai, Ryosuke / Okazaki, Yusuke / Matsuoka, Shunsuke et al. | 2020
- 544
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Parallel, targeted analysis of environmental samples via high‐throughput quantitative PCRWilcox, Taylor M. / McKelvey, Kevin S. / Young, Michael K. / Engkjer, Cory / Lance, Richard F. / Lahr, Andrew / Eby, Lisa A. / Schwartz, Michael K. et al. | 2020
- 554
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Validation of an environmental DNA protocol to detect a stream‐breeding amphibian, the Streamside Salamander (Ambystoma barbouri)Witzel, Nicole A. / Taheri, Ali / Miller, Brian T. / Hardman, Rebecca H. / Withers, David I. / Spear, Stephen F. / Sutton, William B. et al. | 2020
- 565
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Using environmental DNA for detection of Batrachochytrium salamandrivorans in natural waterSpitzen ‐ van der Sluijs, Annemarieke / Stark, Tariq / DeJean, Tony / Verbrugghe, Elin / Herder, Jelger / Gilbert, Maarten / Janse, Jöran / Martel, An / Pasmans, Frank / Valentini, Alice et al. | 2020
- 572
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Macroinvertebrate community diversity and habitat quality relationships along a large river from targeted eDNA metabarcode assaysMarshall, Nathaniel T. / Stepien, Carol A. et al. | 2020
- 587
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A comparison of European eel Anguilla anguilla eDNA concentrations to fyke net catches in five Irish lakesWeldon, Laura / O’Leary, Ciara / Steer, Mark / Newton, Lyn / Macdonald, Heather / Sargeant, Stephanie L. et al. | 2020
- 601
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eDNA‐based monitoring: Advancement in management and conservation of critically endangered killifish speciesMauvisseau, Quentin / Kalogianni, Eleni / Zimmerman, Brian / Bulling, Mark / Brys, Rein / Sweet, Michael et al. | 2020
- 614
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Development and evaluation of fish eDNA metabarcoding assays facilitate the detection of cryptic seahorse taxa (family: Syngnathidae)Nester, Georgia M. / De Brauwer, Maarten / Koziol, Adam / West, Katrina M. / DiBattista, Joseph D. / White, Nicole E. / Power, Matthew / Heydenrych, Matthew J. / Harvey, Euan / Bunce, Michael et al. | 2020
- 627
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Detection of herbivory: eDNA detection from feeding marks on leavesKudoh, Aoi / Minamoto, Toshifumi / Yamamoto, Satoshi et al. | 2020
- 635
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Can environmental DNA be used to detect first arrivals of the cane toad, Rhinella marina, into novel locations?Villacorta‐Rath, Cecilia / Adekunle, Adeshina I. / Edmunds, Richard C. / Strugnell, Jan M. / Schwarzkopf, Lin / Burrows, Damien et al. | 2020
- 647
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Fine‐scale environmental heterogeneity shapes fluvial fish communities as revealed by eDNA metabarcodingBerger, Chloé Suzanne / Hernandez, Cecilia / Laporte, Martin / Côté, Guillaume / Paradis, Yves / Kameni T., Dominique W. / Normandeau, Eric / Bernatchez, Louis et al. | 2020
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Cover Image| 2020