Microbial community structure and functioning in marine sediments associated with diffuse hydrothermal venting assessed by integrated meta‐omics (English)
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In:
Environmental Microbiology
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16
, 9
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2699-2710
;
2014
- Article (Journal) / Electronic Resource
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Title:Microbial community structure and functioning in marine sediments associated with diffuse hydrothermal venting assessed by integrated meta‐omics
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Contributors:Urich, Tim ( author ) / Lanzén, Anders ( author ) / Stokke, Runar ( author ) / Pedersen, Rolf B. ( author ) / Bayer, Christoph ( author ) / Thorseth, Ingunn H. ( author ) / Schleper, Christa ( author ) / Steen, Ida H. ( author ) / Øvreas, Lise ( author )
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Published in:Environmental Microbiology ; 16, 9 ; 2699-2710
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Publisher:
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Publication date:2014-09-01
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Size:12 pages
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ISSN:
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DOI:
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Type of media:Article (Journal)
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Type of material:Electronic Resource
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Language:English
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Source:
Table of contents – Volume 16, Issue 9
The tables of contents are generated automatically and are based on the data records of the individual contributions available in the index of the TIB portal. The display of the Tables of Contents may therefore be incomplete.
- 2635
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Diversity and genomic insights into the uncultured Chloroflexi from the human microbiotaCampbell, Alisha G. / Schwientek, Patrick / Vishnivetskaya, Tatiana / Woyke, Tanja / Levy, Shawn / Beall, Clifford J. / Griffen, Ann / Leys, Eugene / Podar, Mircea et al. | 2014
- 2644
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Who digests the lignocellulose?Hongoh, Yuichi et al. | 2014
- 2646
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Life with compass: diversity and biogeography of magnetotactic bacteriaLin, Wei / Bazylinski, Dennis A. / Xiao, Tian / Wu, Long‐Fei / Pan, Yongxin et al. | 2014
- 2659
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Metagenomic 16S rDNA Illumina tags are a powerful alternative to amplicon sequencing to explore diversity and structure of microbial communitiesLogares, Ramiro / Sunagawa, Shinichi / Salazar, Guillem / Cornejo‐Castillo, Francisco M. / Ferrera, Isabel / Sarmento, Hugo / Hingamp, Pascal / Ogata, Hiroyuki / de Vargas, Colomban / Lima‐Mendez, Gipsi et al. | 2014
- 2672
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Ecological coherence of diversity patterns derived from classical fingerprinting and Next Generation Sequencing techniquesGobet, Angélique / Boetius, Antje / Ramette, Alban et al. | 2014
- 2682
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Productivity and salinity structuring of the microplankton revealed by comparative freshwater metagenomicsEiler, Alexander / Zaremba‐Niedzwiedzka, Katarzyna / Martínez‐García, Manuel / McMahon, Katherine D. / Stepanauskas, Ramunas / Andersson, Siv G. E. / Bertilsson, Stefan et al. | 2014
- 2699
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Microbial community structure and functioning in marine sediments associated with diffuse hydrothermal venting assessed by integrated meta‐omicsUrich, Tim / Lanzén, Anders / Stokke, Runar / Pedersen, Rolf B. / Bayer, Christoph / Thorseth, Ingunn H. / Schleper, Christa / Steen, Ida H. / Øvreas, Lise et al. | 2014
- 2711
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The fibre‐associated cellulolytic bacterial community in the hindgut of wood‐feeding higher termites (Nasutitermes spp.)Mikaelyan, Aram / Strassert, Jürgen F. H. / Tokuda, Gaku / Brune, Andreas et al. | 2014
- 2723
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The gill chamber epibiosis of deep‐sea shrimp Rimicarisexoculata: an in‐depth metagenomic investigation and discovery of ZetaproteobacteriaJan, Cyrielle / Petersen, Jillian M. / Werner, Johannes / Teeling, Hanno / Huang, Sixing / Glöckner, Frank Oliver / Golyshina, Olga V. / Dubilier, Nicole / Golyshin, Peter N. / Jebbar, Mohamed et al. | 2014
- 2739
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Metagenomic characterization of ‘Candidatus Defluviicoccus tetraformis strain TFO71’, a tetrad‐forming organism, predominant in an anaerobic–aerobic membrane bioreactor with deteriorated biological phosphorus removalNobu, Masaru K. / Tamaki, Hideyuki / Kubota, Kengo / Liu, Wen‐Tso et al. | 2014
- 2752
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Pyrosequencing for assessing diversity of eukaryotic microbes: analysis of data on marine planktonic ciliates and comparison with traditional methodsSantoferrara, Luciana F. / Grattepanche, Jean‐David / Katz, Laura A. / McManus, George B. et al. | 2014
- 2764
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Identification accuracy and diversity reproducibility associated with internal transcribed spacer‐based fungal taxonomic library preparationYamamoto, Naomichi / Dannemiller, Karen C. / Bibby, Kyle / Peccia, Jordan et al. | 2014
- 2777
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Bacterial communities and syntrophic associations involved in anaerobic oxidation of methane process of the Sonora Margin cold seeps, Guaymas BasinVigneron, Adrien / Cruaud, Perrine / Pignet, Patricia / Caprais, Jean‐Claude / Gayet, Nicolas / Cambon‐Bonavita, Marie‐Anne / Godfroy, Anne / Toffin, Laurent et al. | 2014
- 2791
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Debaryomyces hansenii and Rhodotorula mucilaginosa comprised the yeast core gut microbiota of wild and reared carnivorous salmonids, croaker and yellowtailRaggi, Patricia / Lopez, Paulina / Diaz, Angélica / Carrasco, Diana / Silva, Alfonso / Velez, Antonio / Opazo, Rafael / Magne, Fabien / Navarrete, Paola A. et al. | 2014
- 2804
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Root microbiome relates to plant host evolution in maize and other PoaceaeBouffaud, Marie‐Lara / Poirier, Marie‐Andrée / Muller, Daniel / Moënne‐Loccoz, Yvan et al. | 2014
- 2815
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Distinct dissolved organic matter sources induce rapid transcriptional responses in coexisting populations of Prochlorococcus, Pelagibacter and the OM60 cladeSharma, Adrian K. / Becker, Jamie W. / Ottesen, Elizabeth A. / Bryant, Jessica A. / Duhamel, Solange / Karl, David M. / Cordero, Otto X. / Repeta, Daniel J. / DeLong, Edward F. et al. | 2014
- 2831
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Black truffle‐associated bacterial communities during the development and maturation of Tuber melanosporum ascocarps and putative functional rolesAntony‐Babu, Sanjay / Deveau, Aurélie / Van Nostrand, Joy D. / Zhou, Jizhong / Le Tacon, François / Robin, Christophe / Frey‐Klett, Pascale / Uroz, Stéphane et al. | 2014
- 2848
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Pyrosequencing reveals regional differences in fruit‐associated fungal communitiesTaylor, Michael W. / Tsai, Peter / Anfang, Nicole / Ross, Howard A. / Goddard, Matthew R. et al. | 2014
- 2859
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Songbirds as general transmitters but selective amplifiers of Borrelia burgdorferi sensu lato genotypes in Ixodes rinicus ticksHeylen, Dieter / Matthysen, Erik / Fonville, Manoj / Sprong, Hein et al. | 2014
- 2869
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Herbivorous rodents (Neotoma spp.) harbour abundant and active foregut microbiotaKohl, Kevin D. / Miller, Aaron W. / Marvin, James E. / Mackie, Roderick / Dearing, M. Denise et al. | 2014
- 2879
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Complete genome of a new Firmicutes species belonging to the dominant human colonic microbiota (‘Ruminococcus bicirculans’) reveals two chromosomes and a selective capacity to utilize plant glucansWegmann, Udo / Louis, Petra / Goesmann, Alexander / Henrissat, Bernard / Duncan, Sylvia H. / Flint, Harry J. et al. | 2014
- 2891
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Vertical mother–neonate transfer of maternal gut bacteria via breastfeedingJost, Ted / Lacroix, Christophe / Braegger, Christian P. / Rochat, Florence / Chassard, Christophe et al. | 2014
- 2905
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Gastric microbiota is altered in oesophagitis and Barrett's oesophagus and further modified by proton pump inhibitorsAmir, Itay / Konikoff, Fred M. / Oppenheim, Michal / Gophna, Uri / Half, Elizabeth E. et al. | 2014
- 2915
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Diet alters probiotic Lactobacillus persistence and function in the intestineTachon, Sybille / Lee, Bokyung / Marco, Maria L. et al. | 2014
- 2927
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Membrane vesicle formation is associated with pyocin production under denitrifying conditions in Pseudomonas aeruginosa PAO1Toyofuku, Masanori / Zhou, Shengmin / Sawada, Isao / Takaya, Naoki / Uchiyama, Hiroo / Nomura, Nobuhiko et al. | 2014
- 2939
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Comparing the anterior nare bacterial community of two discrete human populations using Illumina amplicon sequencingCamarinha‐Silva, Amélia / Jáuregui, Ruy / Chaves‐Moreno, Diego / Oxley, Andrew P.A. / Schaumburg, Frieder / Becker, Karsten / Wos‐Oxley, Melissa L. / Pieper, Dietmar H. et al. | 2014
- 2953
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Marked seasonality of aerobic anoxygenic phototrophic bacteria in the coastal NW Mediterranean Sea as revealed by cell abundance, pigment concentration and pyrosequencing of pufM geneFerrera, Isabel / Borrego, Carles M. / Salazar, Guillem / Gasol, Josep M. et al. | 2014
- 2966
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Mild gut inflammation modulates the proteome of intestinal Escherichia coliSchumann, Sara / Alpert, Carl / Engst, Wolfram / Klopfleisch, Robert / Loh, Gunnar / Bleich, André / Blaut, Michael et al. | 2014
- 2980
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Exploring Anophelesgut bacteria for Plasmodiumblocking activityBahia, Ana C. / Dong, Yuemei / Blumberg, Benjamin J. / Mlambo, Godfree / Tripathi, Abhai / BenMarzouk‐Hidalgo, Omar J. / Chandra, Ramesh / Dimopoulos, George et al. | 2014
- 2995
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Bacterial communicationWackett, Lawrence P. et al. | 2014