Fast and Accurate Calculation of Protein Depth by Euclidean Distance Transform (English)
- New search for: Xu, D.
- New search for: Li, H.
- New search for: Zhang, Y.
- New search for: Xu, D.
- New search for: Li, H.
- New search for: Zhang, Y.
- New search for: Deng, Minghua
- New search for: Jiang, Rui
- New search for: Sun, Fengzhu
In:
Research in computational molecular biology; RECOMB 2013
7821
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304-316
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2013
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ISBN:
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ISSN:
- Conference paper / Print
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Title:Fast and Accurate Calculation of Protein Depth by Euclidean Distance Transform
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Contributors:Xu, D. ( author ) / Li, H. ( author ) / Zhang, Y. ( author ) / Deng, Minghua / Jiang, Rui / Sun, Fengzhu
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Conference:Annual international conference; 17th, Research in computational molecular biology; RECOMB 2013 ; 2013 ; Beijing
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Published in:Research in computational molecular biology; RECOMB 2013 , 7821 ; 304-316LECTURE NOTES IN COMPUTER SCIENCE , 7821 ; 304-316
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Publisher:
- New search for: Springer
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Place of publication:Heidelberg
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Publication date:2013-01-01
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Size:13 pages
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Remarks:Includes bibliographical references and indeX
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ISBN:
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ISSN:
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Type of media:Conference paper
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Type of material:Print
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Language:English
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Keywords:
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Source:
© Metadata Copyright the British Library Board and other contributors. All rights reserved.
Table of contents conference proceedings
The tables of contents are generated automatically and are based on the data records of the individual contributions available in the index of the TIB portal. The display of the Tables of Contents may therefore be incomplete.
- 1
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Reconciliation Revisited: Handling Multiple Optima When Reconciling with Duplication, Transfer, and LossBansal, M.S. / Alm, E.J. / Kellis, M. et al. | 2013
- 14
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SEME: A Fast Mapper of Illumina Sequencing Reads with Statistical EvaluationChen, S. / Wang, A. / Li, L.M. et al. | 2013
- 30
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Dissecting Cancer Heterogeneity with a Probabilistic Genotype-Phenotype ModelCho, D.-Y. / Przytycka, T.M. et al. | 2013
- 32
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eALPS: Estimating Abundance Levels in Pooled Sequencing Using Available Genotyping DataEskin, I. / Hormozdiari, F. / Conde, L. / Riby, J. / Skibola, C. / Eskin, E. / Halperin, E. et al. | 2013
- 45
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Analysis of Metabolic Evolution in Bacteria Using Whole-Genome Metabolic ModelsFaruqi, A.A. / Bryant, W.A. / Pinney, J.W. et al. | 2013
- 58
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Detecting Protein Conformational Changes in Interactions via Scaling Known StructuresGuo, F. / Li, S.C. / Ma, W. / Wang, L. et al. | 2013
- 75
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IPED: Inheritance Path Based Pedigree Reconstruction Algorithm Using Genotype DataHe, D. / Wang, Z. / Han, B. / Parida, L. / Eskin, E. et al. | 2013
- 88
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An Optimal Algorithm for Building the Majority Rule Consensus TreeJansson, J. / Shen, C. / Sung, W.-K. et al. | 2013
- 100
-
UniNovo: A Universal Tool for de Novo Peptide SequencingJeong, K. / Kim, S. / Pevzner, P.A. et al. | 2013
- 118
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Efficiently Identifying Significant Associations in Genome-Wide Association StudiesKostem, E. / Eskin, E. et al. | 2013
- 132
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Identification of Ultramodified Proteins Using Top-Down SpectraLiu, X. / Hengel, S. / Wu, S. / Tolic, N. / Pasa-Tolic, L. / Pevzner, P.A. et al. | 2013
- 145
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Distinguishing between Genomic Regions Bound by Paralogous Transcription FactorsMunteanu, A. / Gordan, R. et al. | 2013
- 158
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Assembling Genomes and Mini-metagenomes from Highly Chimeric ReadsNurk, S. / Bankevich, A. / Antipov, D. / Gurevich, A. / Korobeynikov, A. / Lapidus, A. / Prjibelsky, A. / Pyshkin, A. / Sirotkin, A. / Sirotkin, Y. et al. | 2013
- 171
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Inferring Intra-tumor Heterogeneity from High-Throughput DNA Sequencing DataOesper, L. / Mahmoody, A. / Raphael, B.J. et al. | 2013
- 173
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NP-MuScL: Unsupervised Global Prediction of Interaction Networks from Multiple Data SourcesPuniyani, K. / Xing, E.P. et al. | 2013
- 186
-
High Resolution Modeling of Chromatin InteractionsReeder, C. / Gifford, D. et al. | 2013
- 199
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A Linear Inside-Outside Algorithm for Correcting Sequencing Errors in Structured RNAsReinharz, V. / Ponty, Y. / Waldispuhl, J. et al. | 2013
- 212
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An Accurate Method for Inferring Relatedness in Large Datasets of Unphased Genotypes via an Embedded Likelihood-Ratio TestRodriguez, J.M. / Batzoglou, S. / Bercovici, S. et al. | 2013
- 230
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Learning Natural Selection from the Site Frequency SpectrumRonen, R. / Udpa, N. / Halperin, E. / Bafna, V. et al. | 2013
- 234
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Considering Unknown Unknowns - Reconstruction of Non-confoundable Causal Relations in Biological NetworksSadeh, M.J. / Moffa, G. / Spang, R. et al. | 2013
- 249
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Inference of Tumor Phylogenies with Improved Somatic Mutation DiscoverySalari, R. / Saleh, S.S. / Kashef-Haghighi, D. / Khavari, D. / Newburger, D.E. / West, R.B. / Sidow, A. / Batzoglou, S. et al. | 2013
- 264
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Abstract: Using the Fast Fourier Transform to Accelerate the Computational Search for RNA Conformational SwitchesSenter, E. / Sheikh, S. / Dotu, I. / Ponty, Y. / Clote, P. et al. | 2013
- 266
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MethylCRF, an Algorithm for Estimating Absolute Methylation Levels at Single CpG Resolution from Methylation Enrichment and Restriction Enzyme Sequencing MethodsStevens, M. / Cheng, J.B. / Xie, M. / Costello, J.F. / Wang, T. et al. | 2013
- 269
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Counting Motifs in the Entire Biological Network from Noisy and Incomplete Data (Extended Abstract)Tran, N.H. / Choi, K.P. / Zhang, L. et al. | 2013
- 271
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Extracting Structural Information from Residual Chemical Shift Anisotropy: Analytic Solutions for Peptide Plane Orientations and Applications to Determine Protein StructureTripathy, C. / Yan, A.K. / Zhou, P. / Donald, B.R. et al. | 2013
- 285
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Genome-Wide Survival Analysis of Somatic Mutations in CancerVandin, F. / Papoutsaki, A. / Raphael, B.J. / Upfal, E. et al. | 2013
- 287
-
Spectral Library Generating Function for Assessing Spectrum-Spectrum Match SignificanceWang, M. / Bandeira, N. et al. | 2013
- 289
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SPARSE: Quadratic Time Simultaneous Alignment and Folding of RNAs without Sequence-Based HeuristicsWill, S. / Schmiedl, C. / Miladi, M. / Mohl, M. / Backofen, R. et al. | 2013
- 291
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An Algorithm for Constructing Parsimonious Hybridization Networks with Multiple Phylogenetic TreesWu, Y. et al. | 2013
- 304
-
Fast and Accurate Calculation of Protein Depth by Euclidean Distance TransformXu, D. / Li, H. / Zhang, Y. et al. | 2013
- 317
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Inference of Spatial Organizations of Chromosomes Using Semi-definite Embedding Approach and Hi-C DataZhang, Z. / Li, G. / Toh, K.-C. / Sung, W.-K. et al. | 2013
- 333
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Boosting Prediction Performance of Protein-Protein Interaction Hot Spots by Using Structural Neighborhood PropertiesDeng, L. / Guan, J. / Wei, X. / Yi, Y. / Zhou, S. et al. | 2013