iFrag: A Protein–Protein Interface Prediction Server Based on Sequence Fragments (English)
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- New search for: Andreu, David
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- New search for: Muñoz, Francisco J.
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- New search for: Garcia-Garcia, Javier
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In:
Journal of Molecular Biology
;
429
, 3
;
382-389
;
2016
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ISSN:
- Article (Journal) / Electronic Resource
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Title:iFrag: A Protein–Protein Interface Prediction Server Based on Sequence Fragments
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Contributors:Garcia-Garcia, Javier ( author ) / Valls-Comamala, Victòria ( author ) / Guney, Emre ( author ) / Andreu, David ( author ) / Muñoz, Francisco J. ( author ) / Fernandez-Fuentes, Narcis ( author ) / Oliva, Baldo ( author )
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Published in:Journal of Molecular Biology ; 429, 3 ; 382-389
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Publisher:
- New search for: Elsevier Ltd
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Publication date:2016-11-30
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Size:8 pages
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ISSN:
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DOI:
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Type of media:Article (Journal)
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Type of material:Electronic Resource
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Language:English
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Keywords:PPI , protein–protein interaction , PPV , positive predictive value , MCC , Matthew's correlation coefficient , AUC-ROC , area under the ROC curve , AUC-PR , area under the precision-recall curve , ThT , Thioflavin T , binding site prediction , protein interactions , interface prediction , β-amyloid aggregation
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Source:
Table of contents – Volume 429, Issue 3
The tables of contents are generated automatically and are based on the data records of the individual contributions available in the index of the TIB portal. The display of the Tables of Contents may therefore be incomplete.
- 345
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Computation Resources for Molecular Biology: Special Issue 2017Ostankovitch, Marina I. / Sternberg, Michael J.E. et al. | 2016
- 348
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SCOPe: Manual Curation and Artifact Removal in the Structural Classification of Proteins – extended DatabaseChandonia, John-Marc / Fox, Naomi K. / Brenner, Steven E. et al. | 2016
- 356
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abYsis: Integrated Antibody Sequence and Structure—Management, Analysis, and PredictionSwindells, Mark B. / Porter, Craig T. / Couch, Matthew / Hurst, Jacob / Abhinandan, K.R. / Nielsen, Jens H. / Macindoe, Gary / Hetherington, James / Martin, Andrew C.R. et al. | 2016
- 365
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Arpeggio: A Web Server for Calculating and Visualising Interatomic Interactions in Protein StructuresJubb, Harry C / Higueruelo, Alicia P / Ochoa-Montaño, Bernardo / Pitt, Will R / Ascher, David B / Blundell, Tom L et al. | 2016
- 372
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ClusPro-DC: Dimer Classification by the Cluspro Server for Protein–Protein DockingYueh, Christine / Hall, David R. / Xia, Bing / Padhorny, Dzmitry / Kozakov, Dima / Vajda, Sandor et al. | 2016
- 382
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iFrag: A Protein–Protein Interface Prediction Server Based on Sequence FragmentsGarcia-Garcia, Javier / Valls-Comamala, Victòria / Guney, Emre / Andreu, David / Muñoz, Francisco J. / Fernandez-Fuentes, Narcis / Oliva, Baldo et al. | 2016
- 390
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TMDOCK: An Energy-Based Method for Modeling α-Helical Dimers in MembranesLomize, Andrei L. / Pogozheva, Irina D. et al. | 2016
- 399
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The DisVis and PowerFit Web Servers: Explorative and Integrative Modeling of Biomolecular Complexesvan Zundert, G.C.P. / Trellet, M. / Schaarschmidt, J. / Kurkcuoglu, Z. / David, M. / Verlato, M. / Rosato, A. / Bonvin, A.M.J.J. et al. | 2016
- 408
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SimGen: A General Simulation Method for Large SystemsTaylor, William R. et al. | 2016
- 416
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PROFEAT Update: A Protein Features Web Server with Added Facility to Compute Network Descriptors for Studying Omics-Derived NetworksZhang, P. / Tao, L. / Zeng, X. / Qin, C. / Chen, S.Y. / Zhu, F. / Yang, S.Y. / Li, Z.R. / Chen, W.P. / Chen, Y.Z. et al. | 2016
- 426
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BindProfX: Assessing Mutation-Induced Binding Affinity Change by Protein Interface Profiles with Pseudo-CountsXiong, Peng / Zhang, Chengxin / Zheng, Wei / Zhang, Yang et al. | 2016
- 435
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Intensification: A Resource for Amplifying Population-Genetic Signals with Protein RepeatsChen, Jieming / Wang, Bo / Regan, Lynne / Gerstein, Mark et al. | 2016
- 446
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BFDCA: A Comprehensive Tool of Using Bayes Factor for Differential Co-Expression AnalysisWang, Duolin / Wang, Juexin / Jiang, Yuexu / Liang, Yanchun / Xu, Dong et al. | 2016
- IFC
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Editorial Board| 2014
- iii
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Contents List| 2014