Coronary artery disease associated specific modules and feature genes revealed by integrative methods of WGCNA, MetaDE and machine learning (English)
- New search for: Wang, Yan
- New search for: Liu, Tao
- New search for: Liu, Yan
- New search for: Chen, Jun
- New search for: Xin, Benqiang
- New search for: Wu, Maoyuan
- New search for: Cui, Weigang
- New search for: Wang, Yan
- New search for: Liu, Tao
- New search for: Liu, Yan
- New search for: Chen, Jun
- New search for: Xin, Benqiang
- New search for: Wu, Maoyuan
- New search for: Cui, Weigang
In:
Gene
;
710
;
122-130
;
2019
-
ISSN:
- Article (Journal) / Electronic Resource
-
Title:Coronary artery disease associated specific modules and feature genes revealed by integrative methods of WGCNA, MetaDE and machine learning
-
Contributors:Wang, Yan ( author ) / Liu, Tao ( author ) / Liu, Yan ( author ) / Chen, Jun ( author ) / Xin, Benqiang ( author ) / Wu, Maoyuan ( author ) / Cui, Weigang ( author )
-
Published in:Gene ; 710 ; 122-130
-
Publisher:
-
Publication date:2019-05-06
-
Size:9 pages
-
ISSN:
-
DOI:
-
Type of media:Article (Journal)
-
Type of material:Electronic Resource
-
Language:English
-
Keywords:CAD , coronary artery disease , DEGs , differentially expressed genes , PPI , protein-protein interaction , LIPA , lipase , IL6R , interleukin 6 receptor , WGCNA , Weighted gene co-expression network analysis , SVM , support vector machine , RFE , recursive feature elimination , NCBI , National Center For Biotechnology Information , GEO , Gene Expression Omnibus database , Coronary artery disease , Specific modules , Feature genes , Protein-protein interaction , Machine learning
-
Source:
Table of contents – Volume 710
The tables of contents are generated automatically and are based on the data records of the individual contributions available in the index of the TIB portal. The display of the Tables of Contents may therefore be incomplete.
- 1
-
Discovery of sex-related genes from embryonic development stage based on transcriptome analysis in Eriocheir sinensisDu, Jing / Liu, Yuan / Song, Chengwen / Cui, Zhaoxia et al. | 2019
- 9
-
Identification of six novel mutations in five infants with suspected maple syrup urine disease based on blood and urine metabolism screeningYang, Chenxi / Linpeng, Siyuan / Cao, Yingxi / Wu, Lingqian et al. | 2019
- 17
-
Targeted stimulation of MSCs in peripheral nerve repairMathot, Femke / Shin, Alexander Y. / Van Wijnen, Andre J. et al. | 2019
- 24
-
Association between CLEC4E gene polymorphism of mincle and pulmonary tuberculosis infection in a northern Chinese populationKabuye, Deo / Chu, Yang / Lao, Wenting / Jin, Guojiang / Kang, Hui et al. | 2019
- 30
-
De novo transcriptome assembly of a facultative parasitic nematode Pelodera (syn. Rhabditis) strongyloidesZhang, Menglei / Heikkinen, Liisa / Knott, K. Emily / Wong, Garry et al. | 2019
- 39
-
miR-10b promoted melanoma progression through Wnt/β-catenin pathway by repressing ITCH expressionWang, Shengqiang / Wu, Yi / Xu, Yan / Tang, Xianjun et al. | 2019
- 48
-
Microsatellite instability in mismatch repair and tumor suppressor genes and their expression profiling provide important targets for the development of biomarkers in gastric cancerVerma, Renu / Agarwal, Anil K. / Sakhuja, Puja / Sharma, Prakash Chand et al. | 2019
- 59
-
Identification of complete F-type mitochondrial genome in Lamprotula scripta and Lamprotula caveata and analysis on DUIWang, Guiling / Wu, Congdi / Ge, Jingyuan / Chen, Ya / Han, Zhenyong / Guo, Pengfei / Li, Jiale et al. | 2019
- 66
-
Robust reference gene design and validation for expression studies in the large milkweed bug, Oncopeltus fasciatus, upon cardiac glycoside stressMeinzer, Fee / Dobler, Susanne / Donath, Alexander / Lohr, Jennifer N. et al. | 2019
- 76
-
Integrated analysis of miRNA and mRNA expression profiles in 2-, 6-, and 12-month-old Small Tail Han Sheep ovaries reveals that oar-miR-432 downregulates RPS6KA1 expressionGu, Bo / Liu, Hang / Han, Yue / Chen, Yang / Jiang, Huaizhi et al. | 2019
- 91
-
NF-κB inhibitor, BAY11-7082, suppresses M2 tumor-associated macrophage induced EMT potential via miR-30a/NF-κB/Snail signaling in bladder cancer cellsZhang, Qi / Mao, Zujie / Sun, Juan et al. | 2019
- 98
-
LncRNA TP73-AS1 is upregulated in non-small cell lung cancer and predicts poor survivalZhu, Dapeng / Zhou, Jiaming / Liu, Yuanshun / Du, Lingbin / Zheng, Zhiguo / Qian, Xiang et al. | 2019
- 103
-
miR-205-5p regulates epithelial-mesenchymal transition by targeting PTEN via PI3K/AKT signaling pathway in cisplatin-resistant nasopharyngeal carcinoma cellsZhang, Pei / Lu, Xingyue / Shi, Zongfen / Li, Xian / Zhang, Yuelin / Zhao, Surong / Liu, Hao et al. | 2019
- 114
-
Exogenous hydrogen sulfide prevents lipopolysaccharide-induced inflammation by blocking the TLR4/NF-κB pathway in MAC-T cellsSun, Liting / Chen, Lu / Wang, Fengge / Zheng, Xue / Yuan, Chenfeng / Niu, Qiaoge / Li, Zheng / Deng, Liang / Zheng, Biaobiao / Li, Chunjin et al. | 2019
- 122
-
Coronary artery disease associated specific modules and feature genes revealed by integrative methods of WGCNA, MetaDE and machine learningWang, Yan / Liu, Tao / Liu, Yan / Chen, Jun / Xin, Benqiang / Wu, Maoyuan / Cui, Weigang et al. | 2019
- 131
-
MiR-1197-3p regulates testosterone secretion in goat Leydig cells via targeting PPARGC1AAn, Shi-Yu / Zhang, Guo-Min / Liu, Zi-Fei / Zhou, Chuang / Yang, Peng-Cheng / Wang, Feng et al. | 2019
- 140
-
LncRNA GAS8-AS inhibits colorectal cancer (CRC) cell proliferation by downregulating lncRNA AFAP1-AS1Zhao, Yingying / Chu, Yanjun / Sun, Jing / Song, Ruifeng / Li, Ya / Xu, Feng et al. | 2019
- 145
-
The relationship between c-reactive protein gene +1444C/T, 3407T/C polymorphisms and colorectal cancer susceptibilityZhou, Dang-jun / Bai, Feng-jiao et al. | 2019
- 148
-
Search for appropriate reference genes for quantitative reverse transcription PCR studies in somite, prosencephalon and heart of early mouse embryoMoysés-Oliveira, Mariana / Cabral, Victória / Gigek, Carolina Oliveira / Corrêa, Débora Cabral de Carvalho / Di-Battista, Adriana / Stumpp, Taiza / Melaragno, Maria Isabel et al. | 2019
- 156
-
Expression and single-nucleotide polymorphisms of the H-FABP gene in pigsShang, Peng / Zhang, Bo / Zhang, Jian / Duan, Mengqi / Wu, Lvcao / Gong, Xinglong / Tang, Keren / Zhang, Hao / Chamba, Yangzom et al. | 2019
- 161
-
Characterization and diverse evolution patterns of glycerol-3-phosphate dehydrogenase family genes in Dunaliella salinaWu, Qian / Lan, Yanhong / Cao, Xiyue / Yao, Huiying / Qiao, Dairong / Xu, Hui / Cao, Yi et al. | 2019
- 170
-
Circular RNA circ KMT2E is up-regulated in diabetic cataract lenses and is associated with miR-204-5p sponge functionFan, Caixia / Liu, Xiaomin / Li, Wenfeng / Wang, Haiyan / Teng, Yingli / Ren, Jun / Huang, Yusen et al. | 2019
- 178
-
MicroRNA-9 enhanced radiosensitivity and its mechanism of DNA methylation in non-small cell lung cancerWei, Wei / Dong, Zhuo / Gao, Hui / Zhang, Yu-Yu / Shao, Li-Hong / Jin, Lin-Lin / Lv, Ya-Hui / Zhao, Gang / Shen, Yan-Nan / Jin, Shun-Zi et al. | 2019
- 186
-
Inhibition of formin like 2 promotes the transition of ectopic endometrial stromal cells to epithelial cells in adenomyosis through a MET-like processLi, You / Zhang, Quan / Liu, Faying / Zhang, Ziyu / Zou, Yang / Yang, Bicheng / Luo, Yong / Wang, Liqun / Huang, Ouping et al. | 2019
- 193
-
Long non-coding RNA DILC suppresses bladder cancer cells progressionMa, Qian-Yun / Li, Shu-Ying / Li, Xi-Zhou / Zhou, Teng-Fei / Zhao, Yong-Fu / Liu, Fang-Lin / Yu, Xiao-Na / Lin, Jian / Chen, Fan-Yue / Cao, Jie et al. | 2019
- 202
-
Estrogen receptor α and β gene polymorphism in relation to bone mineral density and lipid profile in Northeast Indian womenSaoji, Rucha / Desai, Meena / Das, Rajat Subhra / Das, Tapan Kumar / Khatkhatay, M. Ikram et al. | 2019
- 210
-
Overexpression of the wheat trehalose 6-phosphate synthase 11 gene enhances cold tolerance in Arabidopsis thalianaLiu, Xin / Fu, Lianshuang / Qin, Peng / Sun, Yinglu / Liu, Jun / Wang, Xiaonan et al. | 2019
- 218
-
Male reproductive tract antimicrobial expression in the extremes of ages of ratsSangeeta, Kumari / Yenugu, Suresh et al. | 2019
- 233
-
miR-454-3p exerts tumor-suppressive functions by down-regulation of NFATc2 in glioblastomaZuo, Jiandong / Yu, Huimei / Xie, Peng / Liu, Wenguang / Wang, Kai / Ni, Hongzao et al. | 2019
- 240
-
Potential association between TSGA13 variants and risk of total colonic aganglionosis in Hirschsprung diseaseJung, Soo-Min / Namgoong, Suhg / Seo, Jeong-Meen / Kim, Dae-Yeon / Oh, Jung-Tak / Kim, Hyun-Young / Kim, Jeong-Hyun et al. | 2019
- 246
-
Extracellular vesicles from osteosarcoma cell lines contain miRNAs associated with cell adhesion and apoptosisJerez, Sofía / Araya, Héctor / Hevia, Daniel / Irarrázaval, Carlos E. / Thaler, Roman / van Wijnen, Andre J. / Galindo, Mario et al. | 2019
- 258
-
High throughput sequencing identifies breast cancer-secreted exosomal LncRNAs initiating pulmonary pre-metastatic niche formationFeng, Tongbao / Zhang, Ping / Sun, Yingxin / Wang, Yan / Tong, Jichun / Dai, Hong / Hua, Zichun et al. | 2019
- 265
-
Efficiency of different fragment lengths of the ubiquitous chromatin opening element HNRPA2B1-CBX3 in driving human CD18 gene expression within self-inactivating lentiviral vectors for gene therapy applicationsGopinath, Chitra / Chodisetty, Sarvani / Ghosh, Arkasubhra / Nelson, Everette Jacob Remington et al. | 2019
- 273
-
PHACTR1 haplotypes are associated with carotid plaque presence and affect PHACTR1 mRNA expression in carotid plaque tissueKuveljic, Jovana / Djuric, Tamara / Stankovic, Aleksandra / Koncar, Igor / Alavantic, Dragan / Zivkovic, Maja et al. | 2019
- 279
-
Overexpression of a trypanothione synthetase gene from Trypanosoma cruzi, TcTrys, confers enhanced tolerance to multiple abiotic stresses in riceLi, Zhenjun / Fu, Xiaoyan / Tian, Yongsheng / Xu, Jing / Gao, Jianjie / Wang, Bo / Han, Hongjuan / Wang, Lijuan / Zhang, Fujian / Zhu, Yanman et al. | 2019
- 291
-
Identification and characterization of WD40 superfamily genes in peachFeng, Ruchao / Zhang, Chunhua / Ma, Ruijuan / Cai, Zhixiang / Lin, Yao / Yu, Mingliang et al. | 2019
- 307
-
FoxL2 combined with Cyp19a1a regulate the spawning upstream migration in Coilia nasusFang, Di-An / Yang, Xue-jun / Feng, Xiaoting / Zhou, Yan-Feng / Xu, Dong-Po / Zhang, Min-Ying / Liu, Kai et al. | 2019
- 316
-
Evaluation of the epidemiological and prognosis significance of ESR2 rs3020450 polymorphism in ovarian cancerFeng, Yajing / Peng, Zhen / Liu, Weigang / Yang, Zhongyu / Shang, Jia / Cui, Liuxin / Duan, Fujiao et al. | 2019
- 324
-
Association of CDKN2BAS gene polymorphism with periodontitis and Coronary Artery Disease from South Indian populationMangalarapu, Madhavi / Vinukonda, Swetha / Komaravalli, Prasanna Latha / Nagula, Praveen / Koduganti, Rekha Rani / Korripally, Premsagar / Sagurthi, Someswar Rao et al. | 2019
- 333
-
Gene promoter methylation and cancer: An umbrella reviewBouras, Emmanouil / Karakioulaki, Meropi / Bougioukas, Konstantinos I. / Aivaliotis, Michalis / Tzimagiorgis, Georgios / Chourdakis, Michael et al. | 2019
- 341
-
The biomarker features of miR-145-3p determined via meta-analysis validated by qRT-PCR in metastatic cancer cell linesÖrs Kumoğlu, Gizem / Döşkaya, Mert / Gulce Iz, Sultan et al. | 2019
- 354
-
The differential neuroprotection of HSP70-hom gene single nucleotide polymorphisms: In vitro (neuronal hypoxic injury model) and in vivo (rat MCAO model) studiesWang, Yipeng / Liu, Yihuan / Sun, Kailin / Wei, Yunhong / Fu, Linyao / Hou, Zongliu / Yi, Xuanzi / Ma, Dongyan / Wang, Wenju / Jin, Xingfang et al. | 2019
- 363
-
Overexpression of CASC11 in ovarian squamous cell carcinoma mediates the development of cancer cell resistance to chemotherapyShen, Fangrong / Feng, Lanlan / Zhou, Jinhua / Zhang, Hongyu / Xu, Yuejuan / Jiang, Rong / Zhang, He / Chen, Youguo et al. | 2019
- 367
-
Short tandem repeats and methylation in the promoter region affect expression of cystathionine beta-synthase gene in the laying henZhou, Rongyan / de Koning, Dirk Jan / McCormack, Heather / Wilson, Peter / Dunn, Ian et al. | 2019
- 375
-
De novo transcriptome assembly and co-expression network analysis of Cynanchum thesioides: Identification of genes involved in resistance to drought stressZhang, Xiaoyan / Yang, Zhongren / Li, Zhi / Zhang, Fenglan / Hao, Lizhen et al. | 2019
- 387
-
Transcriptome and differentially expressed genes of Busseola fusca (Lepidoptera: Noctuidae) larvae challenged with Cry1Ab toxinPeterson, Bianca / Sanko, Tomasz Janusz / Bezuidenhout, Cornelius Carlos / van den Berg, Johnnie et al. | 2019
- 399
-
Relevance of the iron-responsive element (IRE) pseudotriloop structure for IRP1/2 binding and validation of IRE-like structures using the yeast three-hybrid systemChen, Shih-Cheng / Olsthoorn, René C.L. et al. | 2019
- 406
-
Gene expression profile evaluation of integrins in 3T3-L1 cells differentiated to adipocyte, insulin resistant and hypertrophied cellsMalekpour-Dehkordi, Zahra / Mohiti-Ardakani, Javad / Nourbakhsh, Mitra / Teimourian, Shahram / Naghiaee, Yousof / Hemati, Mahdie / Jafary, Farzaneh et al. | 2019
- i
-
Editorial Board| 2019