RightField: Semantic enrichment of Systems Biology data using spreadsheets (English)
- New search for: Wolstencroft, Katherine
- New search for: Owen, Stuart
- New search for: Goble, Carole
- New search for: Nguyen, Quyen
- New search for: Krebs, Olga
- New search for: Muller, Wolfgang
- New search for: Wolstencroft, Katherine
- New search for: Owen, Stuart
- New search for: Goble, Carole
- New search for: Nguyen, Quyen
- New search for: Krebs, Olga
- New search for: Muller, Wolfgang
In:
2012 IEEE 8th International Conference on E-Science
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1-8
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2012
- Conference paper / Electronic Resource
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Title:RightField: Semantic enrichment of Systems Biology data using spreadsheets
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Contributors:Wolstencroft, Katherine ( author ) / Owen, Stuart ( author ) / Goble, Carole ( author ) / Nguyen, Quyen ( author ) / Krebs, Olga ( author ) / Muller, Wolfgang ( author )
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Published in:
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Publisher:
- New search for: IEEE
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Publication date:2012-10-01
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Size:1076562 byte
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ISBN:
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DOI:
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Type of media:Conference paper
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Type of material:Electronic Resource
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Language:English
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Source:
Table of contents conference proceedings
The tables of contents are generated automatically and are based on the data records of the individual contributions available in the index of the TIB portal. The display of the Tables of Contents may therefore be incomplete.
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Author index| 2012
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RightField: Semantic enrichment of Systems Biology data using spreadsheetsWolstencroft, Katherine / Owen, Stuart / Goble, Carole / Nguyen, Quyen / Krebs, Olga / Muller, Wolfgang et al. | 2012
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Integration of modern data management practice with scientific workflowsKilleen, Neil E. B. / Lohrey, Jason M. / Farrell, Michael / Liu, Wilson / Garic, Slavisa / Abramson, David / Nguyen, Hoang / Egan, Gary et al. | 2012
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Remote phenology: Applying machine learning to detect phenological patterns in a cerrado savannaAlmeida, Jurandy / dos Santos, Jefersson A. / Alberton, Bruna / Torres, Ricardo da S. / Morellato, Leonor Patricia C. et al. | 2012
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Towards HPC for the digital Humanities, Arts, and Social Sciences: Needs and challenges of adapting academic HPC for big dataLeetaru, Kalev H. et al. | 2012
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Happy or not: Generating topic-based emotional heatmaps for Culturomics using CyberGISShook, Eric / Leetaru, Kalev / Cao, Guofeng / Padmanabhan, Anand / Wang, Shaowen et al. | 2012
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High-performance computing without commitment: SC2IT: A cloud computing interface that makes computational science available to non-specialistsJorissen, Kevin / Johnson, William / Vila, Fernando D. / Rehr, John J. et al. | 2012
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ExSciTecH: Expanding volunteer computing to Explore Science, Technology, and HealthMatheny, M. / Schlachter, S. / Crouse, L. M. / Kimmel, E. T. / Estrada, T. / Schumann, M. / Armen, R. / Zoppetti, G. / Taufer, M. et al. | 2012
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Fast confidential search for bio-medical data using Bloom filters and Homomorphic CryptographyPerl, Henning / Mohammed, Yassene / Brenner, Michael / Smith, Matthew et al. | 2012
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An integrated science portal for collaborative compute and data intensive protein structure studiesStokes-Rees, Ian / O'Donovan, Daniel / Doherty, Peter / Porter-Mahoney, Meghan / Sliz, Piotr et al. | 2012
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Folding proteins at 500 ns/hour with Work QueueAbdul-Wahid, Badi' / Yu, Li / Rajan, Dinesh / Feng, Haoyun / Darve, Eric / Thain, Douglas / Izaguirre, Jesus A. et al. | 2012
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Large Scale Video Analytics: On-demand, iterative inquiry for moving image researchKuhn, Virginia / Arora, Ritu / Craig, Alan / Franklin, Kevin / Simeone, Michael / Bock, Dave / Marini, Luigi et al. | 2012
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RunMyCode.org: A novel dissemination and collaboration platform for executing published computational resultsStodden, Victoria / Hurlin, Christophe / Perignon, Christophe et al. | 2012
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Experiences in the design and implementation of a Social Cloud for Volunteer ComputingChard, Ryan / Bubendorfer, Kris / Chard, Kyle et al. | 2012
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Web applications for experimental control at CLSLiu, Dong / Maxwell, Dylan / Matias, Elder et al. | 2012
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Collaborative information management in scientific research processesCrompton, Shirley / Matthews, Brian / Yang, Erica / Neylon, Cameron / Coles, Simon et al. | 2012
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A data-driven urban research environment for AustraliaSinnott, Richard O. / Bayliss, Christopher / Galang, Gerson / Greenwood, Phillip / Koetsier, George / Mannix, Damien / Morandini, Luca / Nino-Ruiz, Marcos / Pettit, Chris / Tomko, Martin et al. | 2012
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Towards a quantitative academic internationalization assessment of Brazilian research groupsPerez-Cervantes, Evelyn / Mena-Chalco, Jesus P. / Cesar-Jr, Roberto M. et al. | 2012
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Enabling large genomic data transfers using nation-wide and international dynamic lightpathsBot, Jan / de Vos, Migiel / Boele, Sander / Reinders, Marcel / Kok, Joost et al. | 2012
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Towards the gamification of well-being measuresHall, Margeret / Kimbrough, Steven O. / Haas, Christian / Weinhardt, Christof / Caton, Simon et al. | 2012
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Efficient data transfer protocols for big dataTierney, Brian / Kissel, Ezra / Swany, Martin / Pouyoul, Eric et al. | 2012
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IRMIS: The care and feeding of a generalized relatively relational database for accelerator components with a connection to the real time EPICS Input output controllersFarnsworth, Richard / Benes, Scott et al. | 2012
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Provenance analysis: Towards quality provenanceCheah, You-Wei / Plale, Beth et al. | 2012
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A simulator for social exchanges and collaborations — Architecture and case studyHaas, Christian / Caton, Simon / Trumpp, Daniel / Weinhardt, Christof et al. | 2012
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Scientific workflow rewriting while preserving provenanceCohen-Boulakia, Sarah / Froidevaux, Christine / Chen, Jiuqiang et al. | 2012
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IPOL: Reviewed publication and public testing of research softwareLimare, Nicolas / Oudre, Laurent / Getreuer, Pascal et al. | 2012
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A satellite data portal developed for crowdsourcing data analysis and interpretationHu, Zhenghui / Wu, Wenjun et al. | 2012
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Quality of data driven simulation workflowsReiter, Michael / Breitenbucher, Uwe / Kopp, Oliver / Karastoyanova, Dimka et al. | 2012
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Calibration of watershed models using cloud computingHumphrey, Marty / Beekwilder, Norm / Goodall, Jonathan L. / Ercan, Mehmet B. et al. | 2012
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Pilot abstractions for compute, data, and networkSantcroos, Mark / Delgado Olabarriaga, Silvia / Katz, Daniel S. / Jha, Shantenu et al. | 2012
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Data intensive science at synchrotron based 3D x-ray imaging facilitiesDe Carlo, Francesco / Xiao, Xianghui / Fezzaa, Kamel / Wang, Steve / Schwarz, Nicholas / Jacobsen, Chris / Chawla, Nikhilesh / Fusseis, Florian et al. | 2012
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Enabling scientific data sharing and re-useDarby, R. / Lambert, S. / Matthews, B. / Wilson, M. / Gitmans, K. / Dallmeier-Tiessen, S. / Mele, S. / Suhonen, J. et al. | 2012
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Virtual Simulation Objects concept as a framework for system-level simulationKovalchuk, Sergey V. / Smirnov, Pavel A. / Kosukhin, Sergey S. / Boukhanovsky, Alexander V. et al. | 2012
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Prediction of protein solubility in E. coliSamak, Taghrid / Gunter, Dan / Wang, Zhong et al. | 2012
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Mining hidden mixture context with ADIOS-P to improve predictive pre-fetcher accuracyChoi, Jong Youl / Abbasi, Hasan / Pugmire, David / Podhorszki, Norbert / Klasky, Scott / Capdevila, Cristian / Parashar, Manish / Wolf, Matthew / Qiu, Judy / Fox, Geoffrey et al. | 2012
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A system for management of Computational Fluid Dynamics simulations for civil engineeringSempolinski, Peter / Thain, Douglas / Wei, Daniel / Kareem, Ahsan et al. | 2012
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Incorporating circulation data in relevancy rankings for search algorithms in library collectionsGreen, Harriett E. / Hess, Kirk / Hislop, Richard et al. | 2012
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Verification and user experience of high data rate bandwidth-on-demand networksCullen, Jimmy / Hughes-Jones, Richard / Spencer, Ralph et al. | 2012
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Automated data verification in a large-scale citizen science project: A case studyYu, Jun / Kelling, Steve / Gerbracht, Jeff / Wong, Weng-Keen et al. | 2012
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MIM: A Minimum Information Model vocabulary and framework for Scientific Linked DataGamble, Matthew / Goble, Carole / Klyne, Graham / Zhao, Jun et al. | 2012
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CINET: A cyberinfrastructure for network scienceAbdelhamid, Sherif Elmeligy / Alo, Richard / Arifuzzaman, S. M. / Beckman, Pete / Bhuiyan, Md Hasanuzzaman / Bisset, Keith / Fox, Edward A. / Fox, Geoffrey C. / Hall, Kevin / Hasan, S. M. Shamimul et al. | 2012
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Lessons learned from Galaxy, a Web-based platform for high-throughput genomic analysesGoecks, Jeremy / Team, The Galaxy / Nekrutenko, Anton / Taylor, James et al. | 2012
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g-Social: Enhancing integrated e-science tools with Social Networking functionalityStylianou, Andriani / Loulloudes, Nicholas / Dikaiakos, Marios D. et al. | 2012
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Dynamic network provisioning for data intensive applications in the cloudRuth, Paul / Mandal, Anirban / Xin, Yufeng / Baldine, Ilia / Heerman, Chris / Chase, Jeff et al. | 2012
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GridFTP based real-time data movement architecture for x-ray photon correlation spectroscopy at the Advanced Photon SourceNarayanan, S. / Madden, T. J. / Sandy, A. R. / Kettimuthu, Raj / Link, Michael et al. | 2012
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Partial replica selection for spatial datasetsTian, Yun / Rhodes, Philip J. et al. | 2012
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Generalized representation and mapping for social-ecological data: Freeing data from the databaseJensen, Scott / Plale, Beth / Liu, Xiaozhong / Chen, Miao / Leake, David / England, Julie et al. | 2012
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Data-intensive analysis of HIV mutationsCintho, Mina / Marcondes Cesar, Roberto / Ferreira, Joao Eduardo et al. | 2012
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BIGS: A framework for large-scale image processing and analysis over distributed and heterogeneous computing resourcesRamos-Pollan, Raul / Gonzalez, Fabio A. / Caicedo, Juan C. / Cruz-Roa, Angel / Camargo, Jorge E. / Vanegas, Jorge A. / Perez, Santiago A. / David Bermeo, Jose / Otalora, Juan Sebastian / Rozo, Paola K. et al. | 2012
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Common motifs in scientific workflows: An empirical analysisGarijo, Daniel / Alper, Pinar / Belhajjame, Khalid / Corcho, Oscar / Gil, Yolanda / Goble, Carole et al. | 2012
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Service-based integration of human users in workflow-driven scientific experimentsKarastoyanova, Dimka / Dentsas, Dimitrios / Schumm, David / Sonntag, Mirko / Sun, Lina / Vukojevic, Karolina et al. | 2012
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High-performance data management for genome sequencing centers using Globus Online: A case studySulakhe, Dinanath / Kettimuthu, Rajkumar / Dave, Utpal et al. | 2012
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From scripts towards provenance inferenceHuq, Mohammad Rezwanul / Apers, Peter M. G. / Wombacher, Andreas / Wada, Yoshihide / van Beek, Ludovicus P. H. et al. | 2012
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The Earth System Grid Federation: An open infrastructure for access to distributed geospatial dataCinquini, Luca / Crichton, Daniel / Mattmann, Chris / Harney, John / Shipman, Galen / Wang, Feiyi / Ananthakrishnan, Rachana / Miller, Neill / Denvil, Sebastian / Morgan, Mark et al. | 2012
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Image retrieval in the unstructured data management system AUDRLuo, Junwu / Lang, Bo / Tian, Chao / Zhang, Danchen et al. | 2012
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Towards next generations of software for distributed infrastructures: The European Middleware InitiativeAiftimiei, Cristina / Aimar, Alberto / Ceccanti, Andrea / Cecchi, Marco / Di Meglio, Alberto / Estrella, Florida / Fuhrmam, Patrick / Giorgio, Emidio / Konya, Balazs / Field, Laurence et al. | 2012
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P∗: A model of pilot-abstractionsLuckow, Andre / Santcroos, Mark / Merzky, Andre / Weidner, Ole / Mantha, Pradeep / Jha, Shantenu et al. | 2012
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A framework to access handwritten information within large digitized paper collectionsDiesendruck, Liana / Marini, Luigi / Kooper, Rob / Kejriwal, Mayank / McHenry, Kenton et al. | 2012
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X-ray imaging software tools for HPC clusters and the CloudThompson, Darren / Khassapov, Alex / Nesterets, Yakov / Gureyev, Timur / Taylor, John et al. | 2012
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A new optimization phase for scientific workflow management systemsHoll, Sonja / Zimmermann, Olav / Hofmann-Apitius, Martin et al. | 2012
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Open Social based group access control framework for e-Science data infrastructureZhang, Hui / Wu, Wenjun / Li, Zhenan et al. | 2012
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Welcome page| 2012
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WorkflowSim: A toolkit for simulating scientific workflows in distributed environmentsChen, Weiwei / Deelman, Ewa et al. | 2012
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Digitization and search: A non-traditional use of HPCDiesendruck, Liana / Marini, Luigi / Kooper, Rob / Kejriwal, Mayank / McHenry, Kenton et al. | 2012
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On realizing the concept study ScienceSoft of the European Middleware Initiative: Open Software for Open ScienceDi Meglio, Alberto / Estrella, Florida / Riedel, Morris et al. | 2012
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Velo and REXAN — Integrated data management and high speed analysis for experimental facilitiesvan Dam, Kerstin Kleese / Carson, James / Corrigan, Abigail / Einstein, Daniel / Guillen, Zoe / Heath, Brandi / Kuprat, Andrew / Lanekoff, Ingela / Lansing, Carina / Laskin, Julia et al. | 2012
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Data-oriented research for bioresource utilization: A case study to investigate water uptake in cellulose using Principal ComponentsLing, Liu Yi / Driemeier, Carlos / Cesar, Roberto M. et al. | 2012
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Cooperative VM migration for a virtualized HPC cluster with VMM-bypass I/O devicesTakano, Ryousei / Nakada, Hidemoto / Hirofuchi, Takahiro / Tanaka, Yoshio / Kudoh, Tomohiro et al. | 2012
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WorkWays: Interactive workflow-based science gatewaysNguyen, Hoang / Abramson, David et al. | 2012
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Towards semantically-enabled exploration and analysis of environmental ecosystemsWang, Ping / Fu, Linyun / Patton, Evan W. / McGuinness, Deborah L. / Dein, F. Joshua / Bristol, R. Sky et al. | 2012
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FRED Navigator: An interactive system for visualizing results from large-scale epidemic simulationsPaparian, Jack / Brown, Shawn / Burke, Donald / Grefenstette, John et al. | 2012
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Overview of the TriBITS lifecycle model: A Lean/Agile software lifecycle model for research-based computational science and engineering softwareBartlett, Roscoe A. / Heroux, Michael A. / Willenbring, James M. et al. | 2012
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eResearch environment for remote instrumentation: VBL, RLI, VisLabl & 2Myers, Chris / D'Silva, Michael et al. | 2012
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Using Promethee methods for multi-criteria pull-based scheduling on DCIsMoca, Mircea / Fedak, Gilles et al. | 2012
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Why workflows break — Understanding and combating decay in Taverna workflowsZhao, Jun / Gomez-Perez, Jose Manuel / Belhajjame, Khalid / Klyne, Graham / Garcia-Cuesta, Esteban / Garrido, Aleix / Hettne, Kristina / Roos, Marco / De Roure, David / Goble, Carole et al. | 2012
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Committees| 2012
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Table of contents| 2012
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Sponsors| 2012
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Statistical analysis and visualization services for Spatially Integrated Social Science datasetsAzeezullah, Irfan / Pambudi, Friska / Shyy, Tung-Kai / Azeezullah, Imran / Ward, Nigel / Hunter, Jane / Stimson, Robert J. et al. | 2012
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MARISSA: MApReduce Implementation for Streaming Science ApplicationsDede, E. / Fadika, Z. / Hartog, J. / Govindaraju, M. / Ramakrishnan, L. / Gunter, D. / Canon, R. et al. | 2012
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Discovering drug targets for neglected diseases using a pharmacophylogenomic cloud workflowOcana, Kary A. C. S. / de Oliveira, Daniel / Dias, Jonas / Ogasawara, Eduardo / Mattoso, Marta et al. | 2012
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Flashes in a star stream: Automated classification of astronomical transient eventsDjorgovski, S. G. / Mahabal, A. A. / Donalek, C. / Graham, M. J. / Drake, A. J. / Moghaddam, B. / Turmon, M. et al. | 2012
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Temporal representation for scientific data provenanceChen, Peng / Plale, Beth / Aktas, Mehmet S. et al. | 2012