CrowdDeep: deep-learning from the crowd for nuclei segmentation (English)
- New search for: Ghahremani, Parmida
- New search for: Kaufman, Arie E.
- New search for: Ghahremani, Parmida
- New search for: Kaufman, Arie E.
In:
Proc. SPIE
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12039
; 120391N
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2022
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ISBN:
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ISSN:
- Conference paper / Electronic Resource
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Title:CrowdDeep: deep-learning from the crowd for nuclei segmentation
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Contributors:Ghahremani, Parmida ( author ) / Kaufman, Arie E. ( author )
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Conference:Medical Imaging 2022: Digital and Computational Pathology ; 2022 ; San Diego,California,United States
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Published in:Proc. SPIE ; 12039 ; 120391N
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Publisher:
- New search for: SPIE
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Publication date:2022-04-04
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ISBN:
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ISSN:
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DOI:
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Type of media:Conference paper
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Type of material:Electronic Resource
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Language:English
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Source:
Table of contents conference proceedings
The tables of contents are generated automatically and are based on the data records of the individual contributions available in the index of the TIB portal. The display of the Tables of Contents may therefore be incomplete.
- 120390A
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Cancer cell segmentation for cellularity prediction via a weakly labeled/strongly labeled hybrid convolutional neural networkChambers, David R. / Brimhall, Bradley B. / Poole, Donald R. / Medina, Edward A. et al. | 2022
- 120390B
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WeakSTIL: weak whole-slide image level stromal tumor infiltrating lymphocyte scores are all you needSchirris, Yoni / Engelaer, Mendel / Panteli, Andreas / Horlings, Hugo Mark / Gavves, Efstratios / Teuwen, Jonas et al. | 2022
- 120390C
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Predicting HER2 scores from registered HER2 and H&E imagesTavolara, Thomas E. / Niazi, M. Khalid Khan / Tozbikian, Gary / Wesolowski, Robert / Gurcan, Metin N. et al. | 2022
- 120390D
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Deep ordinal regression for automatic tumor cellularity assessment from pathological imagesSong, Bi / Huang, Albert / Liu, Ming-Chang et al. | 2022
- 120390E
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In the use of artificial intelligence and hyperspectral imaging in digital pathology for breast cancer cell identificationQuintana, Laura / Ortega, Samuel / Leon, Raquel / Fabelo, Himar / Balea-Fernández, Francisco J. / Sauras, Esther / Lejeune, Marylene / Bosch, Ramon / Lopez, Carlos / Callico, Gustavo M. et al. | 2022
- 120390F
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Dense multi-object 3D glomerular reconstruction and quantification on 2D serial section whole slide imagesDeng, Ruining / Yang, Haichun / Asad, Zuhayr / Zhu, Zheyu / Wang, Shiru / Wheless, Lee E. / Fogo, Agnes B. / Huo, Yuankai et al. | 2022
- 120390G
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Automatic detection of head and neck squamous cell carcinoma on pathologic slides using polarized hyperspectral imaging and deep learningZhou, Ximing / Ma, Ling / Mubarak, Hasan K. / Little, James V. / Chen, Amy Y. / Myers, Larry L. / Sumer, Baran D. / Fei, Baowei et al. | 2022
- 120390H
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Thyroid carcinoma detection on whole histologic slides using hyperspectral imaging and deep learningTran, Minh Ha / Ma, Ling / Litter, James V. / Chen, Amy Y. / Fei, Baowei et al. | 2022
- 120390J
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Cell phenotyping using unsupervised clustering on multiplexed fluorescence images of breast cancer tissue specimensHan, Wenchao / Cheung, Alison M. / Wang, Dan / Liu, Kela / Yaffe, Martin J. / Martel, Anne L. et al. | 2022
- 120390K
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Inpainting missing tissue in multiplexed immunofluorescence imagingBao, Shunxing / Tang, Yucheng / Lee, Ho Hin / Gao, Riqiang / Yang, Qi / Yu, Xin / Chiron, Sophie / Coburn, Lori A. / Wilson, Keith T. / Roland, Joseph T. et al. | 2022
- 120390L
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Spatial analysis of cellular arrangement using quantitative, single-cell imaging of protein multiplexingCheung, Alison M. / Wang, Dan / Liu, Kela / Hynes, Sarah / Wang, Ben / Stone, Simone / Ohashi, Pamela / Yaffe, Martin J. et al. | 2022
- 120390M
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Personalized stain style transfer layers for distributed histology classificationShen, Yiqing et al. | 2022
- 120390N
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Procedural generation of synthetic multiplex immunohistochemistry images using cell-based image compression and conditional generative adversarial networksHerbsthofer, Laurin / Ehall, Barbara / Tomberger, Martina / Prietl, Barbara / Pieber, Thomas R. / López-García, Pablo et al. | 2022
- 120390P
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Unsupervised super resolution network for hyperspectral histologic imagingMa, Ling / Rathgeb, Armand / Tran, Minh / Fei, Baowei et al. | 2022
- 120390Q
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Integrating image analysis with single cell RNA-seq data to study podocyte-specific changes in diabetic kidney diseaseGovind, Darshana / Meamardoost, Saber / Yacoub, Rabi / Gunawan, Rudiyanto / Tomaszewski, John E. / Sarder, Pinaki et al. | 2022
- 120390R
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Self-supervised learning with large-scale web image mining for characterizing glomerular lesionsYao, Tianyuan / Lu, Yuzhe / Deng, Ruining / Zhu, Zheyu / Asad, Zuhayr / Yang, Haichun / Wheless, Lee E. / Fogo, Agnes B. / Huo, Yuankai et al. | 2022
- 120390S
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HistoLens: a generalizable tool for increasing accessibility and interpretability of quantitative analyses in digital pathologyBorder, Samuel P. / Ginley, Brandon / Tomaszewski, John E. / Sarder, Pinaki et al. | 2022
- 120390T
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Using deep learning to predict tumor mutational burden in lung squamous cell carcinoma from 20 centersDammak, Salma / Cecchini, Matthew J. / Ward, Aaron D. et al. | 2022
- 120390U
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Computational integration of renal histology and urinary proteomics using neural networksLucarelli, Nicholas / Yun, Donghwan / Han, Dohyun / Ginley, Brandon / Moon, Kyung Chul / Rosenberg, Avi / Tomaszewski, John / Han, Seung Seok / Sarder, Pinaki et al. | 2022
- 120390V
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Computer extracted features of tumor-infiltrating lymphocytes (TILs) architecture are prognostic of progression-free survival in stage III colon cancerAqeel, Aya / Corredor, Germán / Sankar Viswanathan, Vidya / Chen, Chuheng / Mokhtari, Mogjan / Fu, Pingfu / Willis, Joseph / Madabhushi, Anant et al. | 2022
- 120390W
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Deep neural network for cell type differentiation in myelodysplastic syndrome diagnosis performs similarly when trained on compensated or uncompensated dataCamp, Jon / Otteson, Gregory / Seheult, Jansen / Shi, Min / Jevremovic, Dragan / Olteanu, Horatiu / Nanaa, Ahmad / Al-Kali, Aref / Salama, Mohamed / Holmes, David et al. | 2022
- 120390X
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A hybrid computational pathology method for the detection of perineural invasion junctionsHan, Chang Hee / Kwak, Jin Tae et al. | 2022
- 120390Y
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Preserving dense features for Ki67 nuclei detectionMirjahanmardi, Seyed Hossein / Dawe, Melanie / Fyles, Anthony / Shi, Wei / Liu, Fei-Fei / Done, Susan / Khademi, April et al. | 2022
- 120391A
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Quantitative evaluation of color difference between actual specimens and whole-slide imaging-scanned images calibrated with commercial color chartsMurayama, Yusuke / Sugiyama, Tohru / Ogino, Yoshihiko / Furuta, Hiroki / Kambara, Takaaki / Kamisono, Koi / Abe, Tokiya / Emoto, Katsura / Hashiguchi, Akinori / Kajimura, Yoichi et al. | 2022
- 120391C
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Survival time prediction from unannotated lung cancer histopathology imagesFetisov, Nikolai / Hall, Lawrence O. / Goldgof, Dmitry B. / Schabath, Matthew B. et al. | 2022
- 120391D
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Prediction of tumor mutation burden from H&E whole-slide images: a comparison of training strategies with convolutional neural networksChen, Antong / Shah, Tosha / Brown, Andrew / Akrami, Haleh / Swiston, Albert / Vajdi, Amir / Krishnan, Radha / Cristescu, Razvan et al. | 2022
- 120391E
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Sparse capsule networks for informative representation learning in digital pathologyMcNeil, Matthew / Anil, Cem / Martel, Anne et al. | 2022
- 120391F
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Automatic tumour segmentation in H&E-stained whole-slide images of the pancreas.Vendittelli, P. / Smeets, E. M. M. / Litjens, G. J. S. et al. | 2022
- 120391G
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Automated tubular morphometric visualization for whole kidney biopsyKavthekar, Neil / Ginley, Brandon / Border, Samuel / Lucarelli, Nicholas / Jen, Kuang-Yu / Sarder, Pinaki et al. | 2022
- 120391H
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A deep learning-based computational prediction model for characterizing cellular biomarker distribution in tumor microenvironmentPeng, Zhengyao / Bian, Chang / Du, Yang / Tian, Jie et al. | 2022
- 120391I
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Detection of lung cancer metastases in lymph nodes using a multiple instance learning approachGwerder, Mauro / Khan, Amjad / Neppl, Christina / Zlobec, Inti et al. | 2022
- 120391J
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A cloud-based tool for federated segmentation of whole slide imagesLutnick, Brendon / Manthey, David / Becker, Jan U. / Zuckerman, Jonathan E. / Rodrigues, Luis / Jen, Kuang Yu / Sarder, Pinaki et al. | 2022
- 120391K
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RAE-Net: a deep learning system for staging of estrous cyclePatel, Digant / Samanta, Pranab / Kamble, Ravi / Singhal, Nitin et al. | 2022
- 120391M
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Deep learning-enabled classification of gastric ulcers from wireless capsule endoscopic imagesBajhaiya, Deepak / Unni, Sujatha Narayanan et al. | 2022
- 120391N
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CrowdDeep: deep-learning from the crowd for nuclei segmentationGhahremani, Parmida / Kaufman, Arie E. et al. | 2022
- 120391O
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Histopathological image classification based on self-supervised vision transformer and weak labelsGul, Ahmet Gokberk / Cetin, Oezdemir / Reich, Christoph / Flinner, Nadine / Prangemeier, Tim / Koeppl, Heinz et al. | 2022
- 120391P
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Investigating intra-tumor heterogeneity in non-small cell lung cancer using multiplexed immunohistochemistry and deep learningNoureddine, Kouther / Gallagher, Paul / Thomas, Griffin / Lam, Sylvia / MacAulay, Gavin / McGuire, Anna / English, John / Guillaud, Martial / MacAulay, Calum et al. | 2022
- 1203901
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Front Matter: Volume 12039| 2022
- 1203904
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Identifying the origination of liver metastasis using a hand-crafted computational pathology approachChen, Chuheng / Lu, Cheng / Willis, Joseph / Madabhushi, Anant et al. | 2022
- 1203905
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Weakly supervised histopathological image representation learning based on contrastive dynamic clusteringLi, Jun / Jiang, Zhiguo / Zheng, Yushan / Zhang, Haopeng / Shi, Jun / Hu, Dingyi / Luo, Wei / Jiang, Zhongmin / Xue, Chenghai et al. | 2022
- 1203906
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Selecting training samples for ovarian cancer classification via a semi-supervised clustering approachSalguero L., Jennifer / Prasanna, Prateek / Corredor, Germán / Cruz-Roa, Angel / Becerra, David / Romero, Eduardo et al. | 2022
- 1203907
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Automatic flagging of AI segmentation errors in computational pathologyChoudhary, Rakesh / Balachandran, Dhadma / Folmsbee, Jonathan / Rahman, Jawaria / Brandwein, Margaret / Doyle, Scott et al. | 2022
- 1203908
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Tau protein discrete aggregates in Alzheimer's disease: neuritic plaques and tangles detection and segmentation using computational histopathologyMaňoušková, K. / Abadie, V. / Ounissi, M. / Jimenez, G. / Stimmer, L. / Delatour, B. / Durrleman, S. / Racoceanu, D. et al. | 2022
- 1203909
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Automatic generation of the ground truth for tumor budding using H&E stained slidesTavolara, Thomas E. / Dutta, Arijit / Burks, Martin V. / Chen, Wei / Frankel, Wendy / Gurcan, Metin N. / Niazi, M. Khalid Khan et al. | 2022
- 1203910
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Shape-based tumor microenvironment analysis to differentiate non-small cell lung cancer subtypes: a radio-pathomic studyKapse, Saarthak / Gupta, Rajarsi / Prasanna, Prateek et al. | 2022
- 1203913
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Group affinity weakly supervised segmentation from prior selected tissue in colorectal histopathology imagesNguyen, H-G. / Khan, A. / Dawson, H. / Lugli, A. / Zlobec, I. et al. | 2022
- 1203914
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CellSegNet: an adaptive multi-resolution hybrid network for cell segmentationDeng, Junwei / Shen, Yiqing / Guo, Yi / Ke, Jing et al. | 2022
- 1203915
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Deformable histopathology-MRI image registration using deep learningFu, Yabo / Lei, Yang / Schuster, David M. / Patel, Sagar A. / Bradley, Jeffrey D. / Liu, Tian / Yang, Xiaofeng et al. | 2022
- 1203916
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Display systems for digital pathology: what are proper luminance, contrast and resolution settings?Vasudev, Varun / Xthona, Albert / Kimpe, Tom et al. | 2022
- 1203917
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Anonymising pathology data using generative adversarial networksMorrison, David / Harris-Birtill, David et al. | 2022
- 1203918
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Muti-stage attention-based network for brain tumor subtype classificationSuman, Sudhir / Prasanna, Prateek et al. | 2022
- 1203919
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Eosinophilic esophagitis multi-label feature recognition on whole slide imaging using transfer learningShi, Yuxuan / Liu, Quan / Xu, Jiachen / Asad, Zuhayr / Cui, Can / Correa, Hernán / Choksi, Yash / Hiremath, Girish / Huo, Yuankai et al. | 2022